Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_P20
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC059385-1|AAH59385.1| 117|Homo sapiens ubiquitin-like 3 protein. 98 4e-20
AL158193-1|CAH73447.1| 117|Homo sapiens ubiquitin-like 3 protein. 98 4e-20
AL139188-3|CAI17023.1| 117|Homo sapiens ubiquitin-like 3 protein. 98 4e-20
AF044221-1|AAD02323.1| 117|Homo sapiens HCG-1 protein protein. 98 4e-20
CR533458-1|CAG38489.1| 117|Homo sapiens UBL3 protein. 97 5e-20
BC044582-1|AAH44582.1| 117|Homo sapiens ubiquitin-like 3 protein. 94 5e-19
>BC059385-1|AAH59385.1| 117|Homo sapiens ubiquitin-like 3 protein.
Length = 117
Score = 97.9 bits (233), Expect = 4e-20
Identities = 47/64 (73%), Positives = 50/64 (78%)
Frame = +2
Query: 290 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 469
+ N+P D INLRLILVSGKTKEF+FSP DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 470 IYQG 481
IYQG
Sbjct: 61 IYQG 64
Score = 68.1 bits (159), Expect = 4e-11
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +3
Query: 477 RGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHDQR 599
+GRFLH +VTLGAL LP G+TTVMHLV RE LPEPNS QR
Sbjct: 63 QGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQR 103
>AL158193-1|CAH73447.1| 117|Homo sapiens ubiquitin-like 3 protein.
Length = 117
Score = 97.9 bits (233), Expect = 4e-20
Identities = 47/64 (73%), Positives = 50/64 (78%)
Frame = +2
Query: 290 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 469
+ N+P D INLRLILVSGKTKEF+FSP DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 470 IYQG 481
IYQG
Sbjct: 61 IYQG 64
Score = 68.1 bits (159), Expect = 4e-11
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +3
Query: 477 RGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHDQR 599
+GRFLH +VTLGAL LP G+TTVMHLV RE LPEPNS QR
Sbjct: 63 QGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQR 103
>AL139188-3|CAI17023.1| 117|Homo sapiens ubiquitin-like 3 protein.
Length = 117
Score = 97.9 bits (233), Expect = 4e-20
Identities = 47/64 (73%), Positives = 50/64 (78%)
Frame = +2
Query: 290 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 469
+ N+P D INLRLILVSGKTKEF+FSP DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 470 IYQG 481
IYQG
Sbjct: 61 IYQG 64
Score = 68.1 bits (159), Expect = 4e-11
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +3
Query: 477 RGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHDQR 599
+GRFLH +VTLGAL LP G+TTVMHLV RE LPEPNS QR
Sbjct: 63 QGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQR 103
>AF044221-1|AAD02323.1| 117|Homo sapiens HCG-1 protein protein.
Length = 117
Score = 97.9 bits (233), Expect = 4e-20
Identities = 47/64 (73%), Positives = 50/64 (78%)
Frame = +2
Query: 290 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 469
+ N+P D INLRLILVSGKTKEF+FSP DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 470 IYQG 481
IYQG
Sbjct: 61 IYQG 64
Score = 68.1 bits (159), Expect = 4e-11
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +3
Query: 477 RGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHDQR 599
+GRFLH +VTLGAL LP G+TTVMHLV RE LPEPNS QR
Sbjct: 63 QGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQR 103
>CR533458-1|CAG38489.1| 117|Homo sapiens UBL3 protein.
Length = 117
Score = 97.5 bits (232), Expect = 5e-20
Identities = 46/64 (71%), Positives = 50/64 (78%)
Frame = +2
Query: 290 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 469
+ N+P D +NLRLILVSGKTKEF+FSP DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMVNLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 470 IYQG 481
IYQG
Sbjct: 61 IYQG 64
Score = 68.1 bits (159), Expect = 4e-11
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +3
Query: 477 RGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHDQR 599
+GRFLH +VTLGAL LP G+TTVMHLV RE LPEPNS QR
Sbjct: 63 QGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQR 103
>BC044582-1|AAH44582.1| 117|Homo sapiens ubiquitin-like 3 protein.
Length = 117
Score = 94.3 bits (224), Expect = 5e-19
Identities = 46/64 (71%), Positives = 49/64 (76%)
Frame = +2
Query: 290 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 469
+ N+P D INLRLILVSGKTKEF+FS DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMINLRLILVSGKTKEFLFSHNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 470 IYQG 481
IYQG
Sbjct: 61 IYQG 64
Score = 68.1 bits (159), Expect = 4e-11
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +3
Query: 477 RGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHDQR 599
+GRFLH +VTLGAL LP G+TTVMHLV RE LPEPNS QR
Sbjct: 63 QGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQR 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,804,109
Number of Sequences: 237096
Number of extensions: 2414120
Number of successful extensions: 9379
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9361
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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