Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P20
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81449-7|CAE17762.1|  121|Caenorhabditis elegans Hypothetical pr...    64   1e-10
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    31   1.4  
EF090262-1|ABK78775.1|  120|Caenorhabditis elegans glycoprotein ...    30   1.8  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    29   5.6  
AF067608-6|AAC17648.2|  194|Caenorhabditis elegans Hypothetical ...    28   7.4  

>Z81449-7|CAE17762.1|  121|Caenorhabditis elegans Hypothetical
           protein C46F11.6 protein.
          Length = 121

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
 Frame = +2

Query: 284 MSAK---NIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRA 454
           MSAK   +   +++ LRLILVSGKT EF F P+ SA D+   V+D WP+ +W  + V  A
Sbjct: 1   MSAKQSIDSQAERVVLRLILVSGKTHEFEFHPLTSAHDVTQMVFDQWPD-EWYEDKVQSA 59

Query: 455 EILRLIYQG 481
           ++L+LIY G
Sbjct: 60  QMLKLIYHG 68



 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +3

Query: 480 GRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHD 593
           GRFLH SVTL AL L  G+TTVMHLV RE+LPEPNS +
Sbjct: 68  GRFLHGSVTLHALQLMPGKTTVMHLVTRENLPEPNSSE 105


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 282 QCRQKIYPEIRSTYD*SWFPERRKSSSSVPSTRPATSHCTST 407
           Q  +  YP + ST++   +P+  +  +S PST  +T+  T+T
Sbjct: 178 QSPKPTYPSVPSTFEFEKYPKSTEEPTSTPSTSTSTTTTTTT 219


>EF090262-1|ABK78775.1|  120|Caenorhabditis elegans glycoprotein
           hormone alpha 2 protein.
          Length = 120

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 25/83 (30%), Positives = 36/83 (43%)
 Frame = +3

Query: 39  CEKLLVLMNINGKSC*LRLQTMGRLLCLCF*YIFRAVMMAK*FGRVKCLCRMLGSHGCSE 218
           C+K+ V   IN K C L +  + R    CF + F   +  K     KC CRM+      E
Sbjct: 36  CKKVGVEELINEKGCDLMIIRINRCRGHCFSFTFPNPLTKKYSVHAKC-CRMVE----WE 90

Query: 219 ILSLDKSCATRRRITEKEADTQC 287
           +L  +  C+   R     + TQC
Sbjct: 91  MLETELKCSKGNRNLRIPSATQC 113


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 339  PERRKSSSSVPSTRPATSHCTSTIIGPKLTG 431
            P+   SS+SVPS+  ATS  +ST +G    G
Sbjct: 1508 PQPTVSSTSVPSSTGATSSGSSTTVGSSTVG 1538


>AF067608-6|AAC17648.2|  194|Caenorhabditis elegans Hypothetical
           protein B0511.9a protein.
          Length = 194

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +3

Query: 381 PATSHCTSTIIGPKLTGQRNACLAP 455
           P+T  CT T I P LT  R    AP
Sbjct: 76  PSTGECTRTSIAPTLTSARTPVAAP 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,204,422
Number of Sequences: 27780
Number of extensions: 377828
Number of successful extensions: 1036
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)