Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P20
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   0.89 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   2.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.7  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    22   8.3  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   8.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.3  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 21/58 (36%), Positives = 26/58 (44%)
 Frame = +3

Query: 210 CSEILSLDKSCATRRRITEKEADTQCRQKIYPEIRSTYD*SWFPERRKSSSSVPSTRP 383
           CS +L+L  + A RR     EA  + RQ+ Y  IR   D    P      S VPS  P
Sbjct: 395 CSSLLNLPGNDARRRVEAALEAVEEERQREY-GIRVERDPILTPPSSNPVSPVPSPDP 451



 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 210 CSEILSLDKSCATRRRITEKEADTQC 287
           CS+  S+ ++ +  RRI  KE   +C
Sbjct: 125 CSKSFSVKENLSVHRRIHTKERPYKC 150


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 127 KHKHNKRPIVWSRN*HDFPLIFINTNNFSQH 35
           KH H  RPI  S+N H    +F+  + F Q+
Sbjct: 542 KHDHQGRPISISKNQH----LFVELDQFIQN 568


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 216 HCNRESPAYDINTSLYQITWP 154
           H  R+S + D+N    Q++WP
Sbjct: 86  HGRRQSRSMDLNAHREQMSWP 106


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 503 HRAVQEATPGRSVAGSRRETRIPLPSQLRANY 408
           H A+QEA PG +V  + +   +    +LR  Y
Sbjct: 239 HEALQEAVPGDNVGFNVKNVSV---KELRRGY 267


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 503 HRAVQEATPGRSVAGSRRETRIPLPSQLRANY 408
           H A+QEA PG +V  + +   +    +LR  Y
Sbjct: 296 HEALQEAVPGDNVGFNVKNVSV---KELRRGY 324


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 519  GLPLGRTTVMHLVPREHLPEPNSHDQRQ 602
            G+P   +T+ + V   HL  P   DQ+Q
Sbjct: 1070 GVP--HSTLEYKVKERHLMRPRKRDQKQ 1095


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,953
Number of Sequences: 438
Number of extensions: 4294
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)