Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_P18
(853 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 53 1e-06
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 53 1e-06
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 53 1e-06
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 53 1e-06
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 53 1e-06
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 53 1e-06
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 53 1e-06
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 53 1e-06
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 53 1e-06
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 53 1e-06
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 53 1e-06
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 53 1e-06
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 53 1e-06
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 53 1e-06
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 51 5e-06
>BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
>BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
>BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 182 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 241
Query: 761 PRSIXP 778
+ P
Sbjct: 242 DKDTYP 247
>BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein.
Length = 959
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 192 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 251
Query: 761 PRSIXP 778
+ P
Sbjct: 252 DKDTYP 257
>BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 182 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 241
Query: 761 PRSIXP 778
+ P
Sbjct: 242 DKDTYP 247
>AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif protein
15 protein.
Length = 977
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
>AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens
cDNA FLJ12479 fis, clone NT2RM1001059, weakly similar to
NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ).
Length = 925
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 158 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 217
Query: 761 PRSIXP 778
+ P
Sbjct: 218 DKDTYP 223
>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
Length = 1883
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
Length = 1905
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
>AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein
protein.
Length = 969
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
>AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein
protein.
Length = 957
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
>AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding motif
protein 15 long form protein.
Length = 957
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
>AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding motif
protein 15 short form plus alternative exon protein.
Length = 977
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
>AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding motif
protein 15 short form protein.
Length = 969
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR EDAR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
>BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 51.2 bits (117), Expect = 5e-06
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 596 IKISH-----ELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYEPVRSEYRPR 760
+KISH DERVA++ FR E+AR AKHA+ R++LYD+ ++ VY R P
Sbjct: 202 VKISHLSGSGSGDERVAFVNFRRPENARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPL 261
Query: 761 PRSIXP 778
+ P
Sbjct: 262 DKDTYP 267
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,411,642
Number of Sequences: 237096
Number of extensions: 1671350
Number of successful extensions: 3759
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3674
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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