Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_P18
(853 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH1111... 91 2e-18
AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,... 91 2e-18
AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,... 91 2e-18
BT003485-1|AAO39488.1| 328|Drosophila melanogaster SD13756p pro... 36 0.053
AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA... 35 0.12
AY171243-1|AAO11784.1| 194|Drosophila melanogaster putative RNA... 30 4.6
AY061143-1|AAL28691.1| 194|Drosophila melanogaster LD12035p pro... 30 4.6
AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-P... 30 4.6
AE013599-3699|AAF47073.1| 194|Drosophila melanogaster CG18426-P... 30 4.6
M31162-1|AAA28859.1| 448|Drosophila melanogaster protein ( D.me... 29 6.1
AY089622-1|AAL90360.1| 448|Drosophila melanogaster RE35772p pro... 29 8.1
AY061501-1|AAL29049.1| 448|Drosophila melanogaster LD46049p pro... 29 8.1
AE014134-1210|AAF52471.1| 448|Drosophila melanogaster CG8749-PA... 29 8.1
>AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH11110
protein.
Length = 793
Score = 90.6 bits (215), Expect = 2e-18
Identities = 38/62 (61%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = +2
Query: 596 IKISHELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYE-PVRSEYRPRPRSI 772
++++H+LDERVAY+CFR+ EDAR+AKH KPR+I+YDK+A V+PVY+ R EYRPR S+
Sbjct: 131 VRLAHDLDERVAYVCFRTPEDAREAKHHKPRLIIYDKMAIVEPVYKSTTRPEYRPRGHSM 190
Query: 773 XP 778
P
Sbjct: 191 SP 192
Score = 63.3 bits (147), Expect = 4e-10
Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Frame = +3
Query: 237 RSDRDRDRITVKIRNMKRSSSRDSMPRSK----RTRSSIGR-YDDSS----DXXXXXXXX 389
R DRIT+KI NMKRS+SR P S+ R S+GR YD+ S D
Sbjct: 5 RDGAGADRITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPE 64
Query: 390 XXXXXXXXXXXXYVSPHRDDYVRSRDARDESVRSYYKVLCVSALHPKASDEIVK 551
Y SPHR+ Y+R + + YKVLCVSAL PKA D+ ++
Sbjct: 65 RMRRRLDRSPSRYGSPHREPYMRGPPPAERP--AGYKVLCVSALPPKAPDDFIE 116
Score = 32.7 bits (71), Expect = 0.66
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 553 DTLYREYKKYGDFSYK 600
+TLYREYKK+GDFS +
Sbjct: 117 ETLYREYKKFGDFSVR 132
>AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,
isoform B protein.
Length = 793
Score = 90.6 bits (215), Expect = 2e-18
Identities = 38/62 (61%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = +2
Query: 596 IKISHELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYE-PVRSEYRPRPRSI 772
++++H+LDERVAY+CFR+ EDAR+AKH KPR+I+YDK+A V+PVY+ R EYRPR S+
Sbjct: 131 VRLAHDLDERVAYVCFRTPEDAREAKHHKPRLIIYDKMAIVEPVYKSTTRPEYRPRGHSM 190
Query: 773 XP 778
P
Sbjct: 191 SP 192
Score = 63.3 bits (147), Expect = 4e-10
Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Frame = +3
Query: 237 RSDRDRDRITVKIRNMKRSSSRDSMPRSK----RTRSSIGR-YDDSS----DXXXXXXXX 389
R DRIT+KI NMKRS+SR P S+ R S+GR YD+ S D
Sbjct: 5 RDGAGADRITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPE 64
Query: 390 XXXXXXXXXXXXYVSPHRDDYVRSRDARDESVRSYYKVLCVSALHPKASDEIVK 551
Y SPHR+ Y+R + + YKVLCVSAL PKA D+ ++
Sbjct: 65 RMRRRLDRSPSRYGSPHREPYMRGPPPAERP--AGYKVLCVSALPPKAPDDFIE 116
Score = 32.7 bits (71), Expect = 0.66
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 553 DTLYREYKKYGDFSYK 600
+TLYREYKK+GDFS +
Sbjct: 117 ETLYREYKKFGDFSVR 132
>AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,
isoform A protein.
Length = 793
Score = 90.6 bits (215), Expect = 2e-18
Identities = 38/62 (61%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = +2
Query: 596 IKISHELDERVAYICFRSAEDARDAKHAKPRIILYDKVAXVDPVYE-PVRSEYRPRPRSI 772
++++H+LDERVAY+CFR+ EDAR+AKH KPR+I+YDK+A V+PVY+ R EYRPR S+
Sbjct: 131 VRLAHDLDERVAYVCFRTPEDAREAKHHKPRLIIYDKMAIVEPVYKSTTRPEYRPRGHSM 190
Query: 773 XP 778
P
Sbjct: 191 SP 192
Score = 63.3 bits (147), Expect = 4e-10
Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Frame = +3
Query: 237 RSDRDRDRITVKIRNMKRSSSRDSMPRSK----RTRSSIGR-YDDSS----DXXXXXXXX 389
R DRIT+KI NMKRS+SR P S+ R S+GR YD+ S D
Sbjct: 5 RDGAGADRITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPE 64
Query: 390 XXXXXXXXXXXXYVSPHRDDYVRSRDARDESVRSYYKVLCVSALHPKASDEIVK 551
Y SPHR+ Y+R + + YKVLCVSAL PKA D+ ++
Sbjct: 65 RMRRRLDRSPSRYGSPHREPYMRGPPPAERP--AGYKVLCVSALPPKAPDDFIE 116
Score = 32.7 bits (71), Expect = 0.66
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 553 DTLYREYKKYGDFSYK 600
+TLYREYKK+GDFS +
Sbjct: 117 ETLYREYKKFGDFSVR 132
>BT003485-1|AAO39488.1| 328|Drosophila melanogaster SD13756p
protein.
Length = 328
Score = 36.3 bits (80), Expect = 0.053
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 243 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSS 362
DR+ R R+++RS +D++PR +RTRSS R SS
Sbjct: 66 DRELHRERTSNRSLRRSREKDAVPRRRRTRSSPSRSSSSS 105
>AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA
protein.
Length = 463
Score = 35.1 bits (77), Expect = 0.12
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 243 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSS 362
DR+ R R+ +RS +D++PR +RTRSS R SS
Sbjct: 48 DRELHRERTSNRSSRRSREKDAVPRRRRTRSSPSRSSSSS 87
>AY171243-1|AAO11784.1| 194|Drosophila melanogaster putative
RNA-binding protein protein.
Length = 194
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 228 GLPRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRS 335
G R DR+RDR + R+ +R RD RS+R+RS
Sbjct: 48 GAGRRDRERDRDRSRSRDRERERERD-RARSRRSRS 82
>AY061143-1|AAL28691.1| 194|Drosophila melanogaster LD12035p
protein.
Length = 194
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 228 GLPRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRS 335
G R DR+RDR + R+ +R RD RS+R+RS
Sbjct: 48 GAGRRDRERDRDRSRSRDRERERERD-RARSRRSRS 82
>AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-PA
protein.
Length = 1377
Score = 29.9 bits (64), Expect = 4.6
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 237 RSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSS 338
RSDRDR+R + R SSS S S R RSS
Sbjct: 251 RSDRDREREKERDREKIPSSSSSSSSHSNRRRSS 284
>AE013599-3699|AAF47073.1| 194|Drosophila melanogaster CG18426-PA
protein.
Length = 194
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 228 GLPRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRS 335
G R DR+RDR + R+ +R RD RS+R+RS
Sbjct: 48 GAGRRDRERDRDRSRSRDRERERERD-RARSRRSRS 82
>M31162-1|AAA28859.1| 448|Drosophila melanogaster protein (
D.melanogaster U1 70Ksmall nuclear ribonucleoprotein
gene, complete cds. ).
Length = 448
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 237 RSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDD 356
R DR+RDR + + RS SR S R KR S RYD+
Sbjct: 263 RRDRERDRGRGAVASSGRSRSR-SRERRKRRAGSRERYDE 301
>AY089622-1|AAL90360.1| 448|Drosophila melanogaster RE35772p
protein.
Length = 448
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 237 RSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDD 356
R DR+RDR + + RS SR S R KR S RYD+
Sbjct: 263 RRDRERDRGRGAVASNGRSRSR-SRERRKRRAGSRERYDE 301
>AY061501-1|AAL29049.1| 448|Drosophila melanogaster LD46049p
protein.
Length = 448
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 237 RSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDD 356
R DR+RDR + + RS SR S R KR S RYD+
Sbjct: 263 RRDRERDRGRGAVASNGRSRSR-SRERRKRRAGSRERYDE 301
>AE014134-1210|AAF52471.1| 448|Drosophila melanogaster CG8749-PA
protein.
Length = 448
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 237 RSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDD 356
R DR+RDR + + RS SR S R KR S RYD+
Sbjct: 263 RRDRERDRGRGAVASNGRSRSR-SRERRKRRAGSRERYDE 301
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,667,656
Number of Sequences: 53049
Number of extensions: 547922
Number of successful extensions: 1576
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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