Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P16
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...   243   1e-64
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...   243   1e-64
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...   237   5e-63
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...   190   1e-48
Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical pr...    45   6e-05
Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    42   4e-04
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    40   0.002
Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...    36   0.027
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...    36   0.036
Z78419-6|CAB01704.1|  487|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z83119-4|CAE17866.1|  226|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AL117207-8|CAB60399.1|  362|Caenorhabditis elegans Hypothetical ...    29   5.5  
AL132846-4|CAB60347.1|  328|Caenorhabditis elegans Hypothetical ...    28   7.2  

>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score =  243 bits (594), Expect = 1e-64
 Identities = 111/170 (65%), Positives = 125/170 (73%)
 Frame = +2

Query: 158 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 337
           ST G+VI C AAVAW A  PLSIE I+V PPKA EVRVKI  T VCHTDAYTL G DPEG
Sbjct: 3   STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62

Query: 338 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 517
           +FPVVL               T   PGDHVVPLYVPQC  C++C NPKTNLCQK+R +QG
Sbjct: 63  LFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQG 122

Query: 518 QGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKV 667
            G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV   APL+KV
Sbjct: 123 NGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKV 172



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 19/27 (70%), Positives = 21/27 (77%)
 Frame = +3

Query: 669 LLGCGVPTGYGAALNTAKVEPGSNCAI 749
           LLGCG+ TGYGA LNT KVE GS  A+
Sbjct: 174 LLGCGISTGYGAVLNTCKVEEGSTVAV 200


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score =  243 bits (594), Expect = 1e-64
 Identities = 111/170 (65%), Positives = 125/170 (73%)
 Frame = +2

Query: 158 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 337
           ST G+VI C AAVAW A  PLSIE I+V PPKA EVRVKI  T VCHTDAYTL G DPEG
Sbjct: 3   STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62

Query: 338 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 517
           +FPVVL               T   PGDHVVPLYVPQC  C++C NPKTNLCQK+R +QG
Sbjct: 63  LFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQG 122

Query: 518 QGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKV 667
            G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV   APL+KV
Sbjct: 123 NGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKV 172



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 19/27 (70%), Positives = 21/27 (77%)
 Frame = +3

Query: 669 LLGCGVPTGYGAALNTAKVEPGSNCAI 749
           LLGCG+ TGYGA LNT KVE GS  A+
Sbjct: 174 LLGCGISTGYGAVLNTCKVEEGSTVAV 200


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score =  237 bits (581), Expect = 5e-63
 Identities = 111/172 (64%), Positives = 125/172 (72%), Gaps = 2/172 (1%)
 Frame = +2

Query: 158 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVK--ITATGVCHTDAYTLSGKDP 331
           ST G+VI C AAVAW A  PLSIE I+V PPKA EVRVK  I  T VCHTDAYTL G DP
Sbjct: 3   STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKFQILYTAVCHTDAYTLDGHDP 62

Query: 332 EGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRST 511
           EG+FPVVL               T   PGDHVVPLYVPQC  C++C NPKTNLCQK+R +
Sbjct: 63  EGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRIS 122

Query: 512 QGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKV 667
           QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV   APL+KV
Sbjct: 123 QGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKV 174



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 19/27 (70%), Positives = 21/27 (77%)
 Frame = +3

Query: 669 LLGCGVPTGYGAALNTAKVEPGSNCAI 749
           LLGCG+ TGYGA LNT KVE GS  A+
Sbjct: 176 LLGCGISTGYGAVLNTCKVEEGSTVAV 202


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score =  190 bits (462), Expect = 1e-48
 Identities = 83/131 (63%), Positives = 95/131 (72%)
 Frame = +2

Query: 275 ITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCN 454
           I  T VCHTDAYTL G DPEG+FPVVL               T   PGDHVVPLYVPQC 
Sbjct: 215 ILYTSVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCK 274

Query: 455 TCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLC 634
            C++C NPKTN+CQK+R +QG G MPDGT RF C G++L+HFMGCSTFS+YTVV +ISLC
Sbjct: 275 ECEYCKNPKTNMCQKIRVSQGDGFMPDGTSRFTCNGKQLFHFMGCSTFSEYTVVADISLC 334

Query: 635 KVAEAAPLDKV 667
           KV   APL+KV
Sbjct: 335 KVNPQAPLEKV 345



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 19/27 (70%), Positives = 21/27 (77%)
 Frame = +3

Query: 669 LLGCGVPTGYGAALNTAKVEPGSNCAI 749
           LLGCG+ TGYGA LNT KVE GS  A+
Sbjct: 347 LLGCGISTGYGAVLNTCKVEEGSTVAV 373


>Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical
           protein K12G11.4 protein.
          Length = 351

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
 Frame = +2

Query: 209 GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFPVVLXXXXXXXXXX 385
           G PL + ++ V  P+  E+ VKI  +G+CH+D +T  G  +   + P++           
Sbjct: 19  GGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVT 78

Query: 386 XXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGT 541
                     GD   + L    C  C++C      LC  +   Q  G+   GT
Sbjct: 79  IGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHI---QNYGIDRHGT 128


>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
 Frame = +2

Query: 215 PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFPVVLXXXXXXXXXXX 388
           PL + ++ V  P   E+ VKI  +G+CH+D +   G  KD   V P+V            
Sbjct: 20  PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKD-MSVCPLVGGHEGAGSVVQI 78

Query: 389 XXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRS 508
               T  + GD   V L    C  C+FC      LC  +++
Sbjct: 79  GKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHIQN 119


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
 Frame = +2

Query: 173 VIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFP 346
           V K   A+ +E+ G PL I+++ +  P   E+ VK+  +G+CH+D +T  G        P
Sbjct: 6   VPKTQRALIFESYGGPLEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWLGDFHYVSKCP 65

Query: 347 VVLXXXXXXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKV 502
           ++                 + + GD V + L    C  C++C      LC  V
Sbjct: 66  MIGGHEGAGSVISVGSKVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCPHV 118


>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = +2

Query: 218 LSIEEIEVDPPKAGEVRVKITATGVCHTDA--YTLSGKDPEGV-FPVVLXXXXXXXXXXX 388
           L +E++ +  P   +V VK+   G+C +D   +T     P  V  P+++           
Sbjct: 16  LRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGIVSEV 75

Query: 389 XXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 505
                 +K GD +       C  C+ C   + NLC ++R
Sbjct: 76  GNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMR 114


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score = 35.9 bits (79), Expect = 0.036
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
 Frame = +2

Query: 218 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVF----PVVLXXXXXXXXXX 385
           L +E+  +  P   +V VKI   G+C +D + L+     G F    P+VL          
Sbjct: 16  LRLEQAPISKPGPRQVLVKINTVGICGSDVHFLT-HGAIGSFVVKEPMVLGHESSGVVSE 74

Query: 386 XXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 505
                   K GD +       C  C+ C   + NLC  +R
Sbjct: 75  IGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMR 114


>Z78419-6|CAB01704.1|  487|Caenorhabditis elegans Hypothetical
           protein F26A3.6 protein.
          Length = 487

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 185 LAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAY 310
           L A+ + +  PL  E I  DP    +  +++T T VC  DAY
Sbjct: 284 LVAMRYCSCHPLMAELIHYDPSSYRDFLLRVTQTSVCSVDAY 325


>Z83119-4|CAE17866.1|  226|Caenorhabditis elegans Hypothetical
           protein R05H10.7 protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 110 TIISTFCDWQLSSAVMSTVGKVIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITAT 286
           ++++    +  S+ V +  G+++ CL   AW+     +   + EVD      +   I   
Sbjct: 49  SLVARCLQFPFSTVVTTQSGEIVACLVNSAWKRDDNAVEGADYEVDEGLTENMTAFIKML 108

Query: 287 GVCHTDAYTLS 319
             CH D + L+
Sbjct: 109 NTCHEDFWNLA 119


>AL117207-8|CAB60399.1|  362|Caenorhabditis elegans Hypothetical
           protein Y60A3A.14 protein.
          Length = 362

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 574 VEFLSFTAESPSAIWHHTLTL 512
           V+   F+AE+ +  WHHT++L
Sbjct: 157 VQIFRFSAENSTGFWHHTISL 177


>AL132846-4|CAB60347.1|  328|Caenorhabditis elegans Hypothetical
           protein Y43D4A.6 protein.
          Length = 328

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 19  LKGQGYYLPTKFVLSDSDILLHHRVSAS 102
           LK   + L T+F++ D +ILLH R+  +
Sbjct: 143 LKIADFGLSTRFIVDDKEILLHERIGTT 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,671,621
Number of Sequences: 27780
Number of extensions: 397312
Number of successful extensions: 958
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)