Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_P09
(857 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.3
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 6.3
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 8.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 8.3
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 8.3
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.2 bits (45), Expect = 6.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 433 NGRPVLIHKNMSVPRLLPXVQ 371
NGR I + M+ RLLP V+
Sbjct: 28 NGREDQIPREMNTERLLPYVE 48
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.2 bits (45), Expect = 6.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 433 NGRPVLIHKNMSVPRLLPXVQ 371
NGR I + M+ RLLP V+
Sbjct: 28 NGREDQIPREMNTERLLPYVE 48
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.8 bits (44), Expect = 8.3
Identities = 6/21 (28%), Positives = 11/21 (52%)
Frame = -3
Query: 558 HVGRCVVEQCFLVVRXEGPCC 496
H+G ++ L++ G CC
Sbjct: 57 HIGLAIIYSMLLIMSLVGNCC 77
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = +3
Query: 54 DYTYTNFTQXIRNESDKYAVLS*HHVSCCSQLPSAQP 164
+Y Y+N+ N + Y L +++ Q+P P
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVP 124
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = +3
Query: 54 DYTYTNFTQXIRNESDKYAVLS*HHVSCCSQLPSAQP 164
+Y Y+N+ N + Y L +++ Q+P P
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVP 124
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = +3
Query: 54 DYTYTNFTQXIRNESDKYAVLS*HHVSCCSQLPSAQP 164
+Y Y+N+ N + Y L +++ Q+P P
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVP 124
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = +3
Query: 54 DYTYTNFTQXIRNESDKYAVLS*HHVSCCSQLPSAQP 164
+Y Y+N+ N + Y L +++ Q+P P
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVP 124
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = +3
Query: 54 DYTYTNFTQXIRNESDKYAVLS*HHVSCCSQLPSAQP 164
+Y Y+N+ N + Y L +++ Q+P P
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVP 124
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = +3
Query: 54 DYTYTNFTQXIRNESDKYAVLS*HHVSCCSQLPSAQP 164
+Y Y+N+ N + Y L +++ Q+P P
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVP 124
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = +3
Query: 54 DYTYTNFTQXIRNESDKYAVLS*HHVSCCSQLPSAQP 164
+Y Y+N+ N + Y L +++ Q+P P
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVP 124
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 8.3
Identities = 6/21 (28%), Positives = 11/21 (52%)
Frame = -3
Query: 558 HVGRCVVEQCFLVVRXEGPCC 496
H+G ++ L++ G CC
Sbjct: 57 HIGLAIIYSMLLIMSLVGNCC 77
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,264
Number of Sequences: 438
Number of extensions: 3983
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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