Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P08
         (858 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g49730.1 68418.m06158 ferric reductase-like transmembrane com...    35   0.060
At4g35560.1 68417.m05053 expressed protein                             32   0.42 
At3g47570.1 68416.m05179 leucine-rich repeat transmembrane prote...    32   0.56 
At1g05880.1 68414.m00616 expressed protein                             30   1.7  
At4g12700.1 68417.m01994 expressed protein                             30   2.3  
At4g21640.1 68417.m03136 subtilase family protein similar to sub...    28   9.1  
At2g23520.1 68415.m02807 expressed protein ; expression supporte...    28   9.1  

>At5g49730.1 68418.m06158 ferric reductase-like transmembrane
           component family protein similar to ferric-chelate
           reductase (FRO1) [Pisum sativum] GI:15341529; contains
           Pfam profile PF01794: Ferric reductase like
           transmembrane componenent
          Length = 738

 Score = 35.1 bits (77), Expect = 0.060
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = +3

Query: 54  IGFFSIIITLTEFFWKRNNITSCWEKKNLNGSFIGCVLSGAV 179
           IGF S+I  L  F+ KR NIT+ W K  L   F+GC+++  +
Sbjct: 577 IGFISMITLLDIFYIKRYNITTWWYKGLL---FVGCMVASVL 615


>At4g35560.1 68417.m05053 expressed protein 
          Length = 917

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -2

Query: 449 YKLSSGTRVSVPLVD-DEGVSSSKEESNKAPASLAMN*CNFNLLLRSWKVRCLCLDWYTA 273
           Y  S+G+RVSV   + D  + S   +   +P S AM  C  NL  +S K+    L W  A
Sbjct: 88  YLASNGSRVSVGYSNGDILIWSIPSKGECSPESSAMI-CKLNLGYKSEKIPIASLKWVYA 146

Query: 272 KSKAPTPILAKSSS 231
           + KA    +  SSS
Sbjct: 147 EGKASRVYVIGSSS 160


>At3g47570.1 68416.m05179 leucine-rich repeat transmembrane protein
           kinase, putative protein kinase Xa21 - Oryza sativa,
           PIR:A57676
          Length = 1010

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 563 LLITAPMISSPVFTLSKKCLNLAVLSTFRNVSNGGINAY 447
           L++   M+S P+ T   K LNL  LS F N  +GGI A+
Sbjct: 390 LILDQNMLSGPLPTSLGKLLNLRYLSLFSNRLSGGIPAF 428


>At1g05880.1 68414.m00616 expressed protein
          Length = 426

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = -2

Query: 311 WKVRCLCLDWYT-AKSKAPTPILAKSSSPLSDSHVFCNCC 195
           W V C+C  W   A+S   +  L +   P  D+  FC  C
Sbjct: 58  WNVDCICKQWSAGAQSVRDSVGLLELDPPSDDNEYFCGAC 97


>At4g12700.1 68417.m01994 expressed protein
          Length = 561

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = +1

Query: 424 TLVPEDNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKV 591
           T  PED L+       TFL  +  A L+     VKTGE  + A  N+TA G  + +
Sbjct: 47  TYEPEDPLFHPSDKITTFLTSNSNATLKSDDSIVKTGEDFMAA--NQTAFGGFINI 100


>At4g21640.1 68417.m03136 subtilase family protein similar to
           subtilase SP1 [Oryza sativa] GI:9957714
          Length = 733

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 500 LAVLSTFRNVSNGGINAYKLSSGTRVSVPLV 408
           +++L+    +  G  N +KL SGT +S P+V
Sbjct: 492 VSILAAVSPLDPGAFNGFKLHSGTSMSTPVV 522


>At2g23520.1 68415.m02807 expressed protein ; expression supported
           by MPSS
          Length = 862

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 284 WYTAKSKAPTPILAKSSSPLSD 219
           W+T+K ++P P+    SSP+ D
Sbjct: 521 WFTSKRQSPKPVAKSYSSPMYD 542


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,594,433
Number of Sequences: 28952
Number of extensions: 353033
Number of successful extensions: 903
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)