BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_P07 (828 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 331 5e-91 SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 324 4e-89 SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 278 3e-75 SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 242 3e-64 SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 155 4e-38 SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 7e-26 SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 101 7e-22 SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12 SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 8e-04 SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.1 SB_56066| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5 SB_30795| Best HMM Match : Epimerase (HMM E-Value=0) 29 3.5 SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 3.5 SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.5 SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.6 SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.6 SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 4.6 SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1 >SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1097 Score = 331 bits (813), Expect = 5e-91 Identities = 161/207 (77%), Positives = 176/207 (85%) Frame = +3 Query: 132 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLI 311 YSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLI Sbjct: 15 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLI 74 Query: 312 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAY 491 GRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAY Sbjct: 75 GRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAY 134 Query: 492 LGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGXRX 671 LG V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK R Sbjct: 135 LGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERN 194 Query: 672 VLIFDLGXRXLRRVHPYIEDGISEVNS 752 VLI+DLG IEDGI EV S Sbjct: 195 VLIYDLGGGTFDVSVLTIEDGIFEVKS 221 Score = 30.3 bits (65), Expect = 2.0 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = +2 Query: 89 MAKAPAVGIDLGTT 130 MAK PAVGIDLGTT Sbjct: 1 MAKTPAVGIDLGTT 14 >SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) Length = 640 Score = 324 bits (797), Expect = 4e-89 Identities = 158/208 (75%), Positives = 179/208 (86%), Gaps = 1/208 (0%) Frame = +3 Query: 132 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLI 311 YSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA+NP NTIFDAKRLI Sbjct: 15 YSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLI 74 Query: 312 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAY 491 GR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSMVL KMKETAEAY Sbjct: 75 GRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAY 134 Query: 492 LGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGXRX 671 LG+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +G + Sbjct: 135 LGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKN 194 Query: 672 VLIFDLGXRXLRRVHPYIEDG-ISEVNS 752 VLIFDLG I+DG + EV S Sbjct: 195 VLIFDLGGGTFDVSILTIDDGSLFEVKS 222 Score = 29.9 bits (64), Expect = 2.6 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +2 Query: 89 MAKAPAVGIDLGTT 130 M KAPA+GIDLGTT Sbjct: 1 MGKAPAIGIDLGTT 14 >SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1327 Score = 278 bits (682), Expect = 3e-75 Identities = 137/206 (66%), Positives = 165/206 (80%), Gaps = 1/206 (0%) Frame = +3 Query: 132 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRL 308 YSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP NT+FDAKRL Sbjct: 712 YSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRL 771 Query: 309 IGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEA 488 IGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+MVLTKMKETAEA Sbjct: 772 IGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEA 831 Query: 489 YLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGXR 668 YLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK G + Sbjct: 832 YLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEK 890 Query: 669 XVLIFDLGXRXLRRVHPYIEDGISEV 746 +L+FDLG I++G+ EV Sbjct: 891 NILVFDLGGGTFDVSLLTIDNGVFEV 916 >SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 746 Score = 242 bits (592), Expect = 3e-64 Identities = 124/173 (71%), Positives = 134/173 (77%), Gaps = 25/173 (14%) Frame = +3 Query: 132 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLI 311 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLI Sbjct: 15 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLI 74 Query: 312 GRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV--------------- 446 GR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV Sbjct: 75 GRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKG 134 Query: 447 ----------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 575 SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG Sbjct: 135 ETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187 Score = 146 bits (354), Expect = 2e-35 Identities = 78/104 (75%), Positives = 82/104 (78%) Frame = +3 Query: 441 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 620 ++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270 Query: 621 AAAIAYGLDKKGTGXRXVLIFDLGXRXLRRVHPYIEDGISEVNS 752 AAAIAYGLDKK R VLIFDLG IEDGI EV S Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKS 314 Score = 29.9 bits (64), Expect = 2.6 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +2 Query: 89 MAKAPAVGIDLGTT 130 M KAPA+GIDLGTT Sbjct: 1 MTKAPAIGIDLGTT 14 >SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) Length = 437 Score = 155 bits (376), Expect = 4e-38 Identities = 83/190 (43%), Positives = 116/190 (61%), Gaps = 3/190 (1%) Frame = +3 Query: 132 YSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKR 305 YSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q +NP NTI+DAKR Sbjct: 42 YSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPKNTIYDAKR 101 Query: 306 LIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 482 IG+ F + K + F V +D G V KG PEE+ V+ K++ A Sbjct: 102 FIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMA 161 Query: 483 EAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTG 662 E L TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G Sbjct: 162 ERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EG 220 Query: 663 XRXVLIFDLG 692 V++ DLG Sbjct: 221 VANVMVVDLG 230 >SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1068 Score = 114 bits (275), Expect = 7e-26 Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 4/149 (2%) Frame = +3 Query: 273 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 449 N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177 Query: 450 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 629 +M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA + Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237 Query: 630 IAYGLDKKG---TGXRXVLIFDLGXRXLR 707 +AYG+ K+ R V+ D+G L+ Sbjct: 238 LAYGIYKQDLPTDKPRNVVFVDIGHSSLQ 266 Score = 44.0 bits (99), Expect = 2e-04 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%) Frame = +3 Query: 123 VPRYSC-VGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 263 V SC + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ Sbjct: 8 VGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55 >SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) Length = 179 Score = 101 bits (242), Expect = 7e-22 Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 24/113 (21%) Frame = +3 Query: 396 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 575 I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61 Query: 576 TISGLN------------------------VLRIINEPTAAAIAYGLDKKGTG 662 TI+GL+ VLRIINEPTAAAIAYGLDK G Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGG 114 >SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1019 Score = 70.1 bits (164), Expect = 2e-12 Identities = 34/85 (40%), Positives = 52/85 (61%) Frame = +3 Query: 390 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 569 P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126 Query: 570 AGTISGLNVLRIINEPTAAAIAYGL 644 A + GLNVL+I+N TA A+ YGL Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGL 151 >SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) Length = 592 Score = 41.5 bits (93), Expect = 8e-04 Identities = 18/28 (64%), Positives = 22/28 (78%) Frame = +3 Query: 159 GKVEIIANDQGNRTTPSYVAFTDTERLI 242 G IIAND G+R TP+ VAF+DTE+LI Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110 >SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) Length = 212 Score = 31.1 bits (67), Expect = 1.1 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%) Frame = +3 Query: 168 EIIANDQGNRTTPSYVAFT-DTERL 239 ++I N +G+RTTPS VAFT + ERL Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31 >SB_56066| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 654 Score = 29.5 bits (63), Expect = 3.5 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = -2 Query: 161 PVLEDTNARVXWYPDRFLLRV--LLPFCIFNQSCYLFLKQL 45 PVL N+ W P+ F L+V ++ F + NQ Y+ ++ L Sbjct: 248 PVLNHLNSSELWVPNEFALKVFKIIMFSVQNQYNYVVIQML 288 >SB_30795| Best HMM Match : Epimerase (HMM E-Value=0) Length = 869 Score = 29.5 bits (63), Expect = 3.5 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +2 Query: 56 RTSNKTD*KYKMAKAPAVGIDLGTTXLLRWCLPAREGG 169 R++ K+D +K KAP G G + RW PA E G Sbjct: 558 RSAEKSDAIHKEKKAPRGGRSGGPSQRKRWTAPAEEDG 595 >SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) Length = 953 Score = 29.5 bits (63), Expect = 3.5 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Frame = +2 Query: 176 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 346 RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326 >SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) Length = 350 Score = 29.5 bits (63), Expect = 3.5 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = -1 Query: 276 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 178 GS PPG W R +AR T +T +SC PG W Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236 >SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) Length = 420 Score = 29.1 bits (62), Expect = 4.6 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 Query: 294 RILCCWGSSPPGSWRH 247 R++CC G SP WRH Sbjct: 395 RVVCCQGDSPSPRWRH 410 >SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) Length = 340 Score = 29.1 bits (62), Expect = 4.6 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 Query: 294 RILCCWGSSPPGSWRH 247 R++CC G SP WRH Sbjct: 170 RVVCCQGDSPSPRWRH 185 >SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) Length = 1080 Score = 29.1 bits (62), Expect = 4.6 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%) Frame = +3 Query: 456 VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 605 V K T+E Y+G T + NA +T+P YF + +K G G+ + Sbjct: 994 VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051 Query: 606 INEPTAAAIAYGLDKKGTG 662 +++ I+Y LD+K TG Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070 >SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1506 Score = 28.7 bits (61), Expect = 6.1 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = -3 Query: 484 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 305 S F+F ST + +S +KV+ SPL + + P+ G S C V NL Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165 Query: 304 RLASNIVL 281 ++++ VL Sbjct: 1166 KISNATVL 1173 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,509,165 Number of Sequences: 59808 Number of extensions: 578029 Number of successful extensions: 1472 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1358 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1465 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2323539746 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -