Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_P05
(849 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 29 0.63
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 29 0.83
SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 28 1.9
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 27 3.4
SPBP8B7.14c |dpb2||DNA polymerase epsilon catalytic subunit b Dp... 27 4.4
SPCC1906.01 |mpg1||mannose-1-phosphate guanyltransferase Mpg1|Sc... 26 5.9
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 5.9
SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3 |Schi... 26 5.9
SPAC17C9.02c |lys7||alpha-aminoadipate reductase phosphopantethe... 26 5.9
SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster... 26 7.8
SPAC57A10.04 |mug10||sequence orphan|Schizosaccharomyces pombe|c... 26 7.8
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 29.5 bits (63), Expect = 0.63
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 562 AMPMDTAFVVTKPALNTLSSQRKNVRRRRCGKMNATRVGALRMVNP 699
A P DT + TKP NTL S K+ +N T +R + P
Sbjct: 622 APPADTKKIKTKPKSNTLGSMFKSSLVSLMSTINETNAHYIRCIKP 667
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 29.1 bits (62), Expect = 0.83
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 158 ARTAF*GSTFAVSRQNDKTDCNQTPHFTQSS 66
AR F +F V+ N DCN TPH +S
Sbjct: 289 ARLNFLSFSFCVNPMNQSLDCNTTPHRRNAS 319
>SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 176
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = -3
Query: 742 FSGVLLVMHSILVHMGLPSEVHQHVLHSFFHIVFGAHSFS 623
F +L + + + LP ++ H LH F H + +S
Sbjct: 35 FYSILCFLSFFALLLHLPCSIYSHTLHFFHHFTIACYHYS 74
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 612 CVQCRLRHYKCRIHRHCTYNCYTGSTSTI 526
C+ CR R KC +R C +NC+ I
Sbjct: 26 CLYCRRRKIKCDKNRPC-HNCFVAKRECI 53
>SPBP8B7.14c |dpb2||DNA polymerase epsilon catalytic subunit b Dpb2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 130 KVEP*NAVLAQKAHVQQSK-NQKTNRVR*QQMTRLPSKKCSRKWNAWREP 276
+V+P NA+ HV K + NR Q++ SKKC +W + EP
Sbjct: 19 EVQP-NALRPVAFHVFTRKYDLNINRDSLQELASFVSKKCGSQWRSQCEP 67
>SPCC1906.01 |mpg1||mannose-1-phosphate guanyltransferase
Mpg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 634 VRRRRCGKMNATRVGALRMVNPCALGWNASLITLPRSLX*SRAXNALGDXVV 789
VR +RC + ++RV V +GWN++L + R + LGD VV
Sbjct: 286 VRLQRCAILKSSRVRDHAWVKSSIVGWNSTLGSWSR----LENVSVLGDDVV 333
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 243 MQSEVECLAGTEWES 287
+Q+ VEC+AGT+W S
Sbjct: 606 VQALVECVAGTDWSS 620
>SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 606
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 441 LGLCSLDACRRSSTPKKFELIQGRECAPG 527
L L +L CR S K E+ G +CA G
Sbjct: 89 LALQALKHCRESLPNKSIEIDMGNQCASG 117
>SPAC17C9.02c |lys7||alpha-aminoadipate reductase
phosphopantetheinyl transferase Lys7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 78 EMRCLIAICFIVLARHCESGALKCSP 155
+M +A+ I++ RH S AL+CSP
Sbjct: 43 DMDAKMALASILIKRHLVSTALECSP 68
>SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 612 CVQCRLRHYKCRIHRHCTYNC 550
C+ CR R KC + YNC
Sbjct: 46 CLTCRKRRIKCDERKPICYNC 66
>SPAC57A10.04 |mug10||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 338
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 387 PGTSFQRDCNTCVCLDNGL 443
P TSF D N CV D+GL
Sbjct: 236 PATSFIYDFNACVFCDDGL 254
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,585,927
Number of Sequences: 5004
Number of extensions: 77220
Number of successful extensions: 242
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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