Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P05
         (849 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g11410.1 68414.m01311 S-locus protein kinase, putative simila...    29   3.0  
At1g34580.1 68414.m04298 monosaccharide transporter, putative si...    29   5.2  

>At1g11410.1 68414.m01311 S-locus protein kinase, putative similar
           to receptor-like protein kinase [Arabidopsis thaliana]
           gi|4008008|gb|AAC95352; contains S-locus glycoprotein
           family domain, Pfam:PF00954
          Length = 840

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -1

Query: 585 KCRIHRHCTYNCYTGSTSTIPERILC-PG 502
           KC I+ HC +N Y  STST      C PG
Sbjct: 286 KCDIYNHCGFNGYCDSTSTEKFECSCLPG 314


>At1g34580.1 68414.m04298 monosaccharide transporter, putative
           similar to monosaccharide transporter 3 [Oryza sativa]
           GI:11991114, monosaccharide transporter [Nicotiana
           tabacum] GI:19885, monosaccharide transporter 1 [Oryza
           sativa] GI:11991110; contains Pfam profile PF00083:
           major facilitator superfamily protein
          Length = 506

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 698 GFTIRSAPTRVAFIFPHRLRRTFFLWLDNVFSAGFVTTNAVSIG 567
           GFT ++AP  ++ + P R R  F +      S G V  N ++ G
Sbjct: 148 GFTNQAAPVYLSEVAPPRWRGAFNIGFSCFISMGVVAANLINYG 191


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,472,901
Number of Sequences: 28952
Number of extensions: 434996
Number of successful extensions: 1338
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1970388800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)