Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P03
         (863 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    36   0.002
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.9  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +3

Query: 351 IPYPVEKKIPYPVKVHVPQPYP 416
           +P+PV   +P+ VKV++PQPYP
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYP 199



 Score = 28.7 bits (61), Expect = 0.24
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 6/27 (22%)
 Frame = +3

Query: 354 PYPVEKKIPYPV------KVHVPQPYP 416
           PYP+E + P+PV      +V VP+PYP
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYP 257



 Score = 26.6 bits (56), Expect = 0.97
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 351 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 440
           +PY VEK  PYP++V  P P    +   +P
Sbjct: 224 VPYTVEK--PYPIEVEKPFPVEVLKKFEVP 251



 Score = 24.2 bits (50), Expect = 5.2
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 354 PYPVEKKIPYPVKVHVPQPYPXCQTCPLP 440
           PYP++  +  P+K+ + +  P     P+P
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVP 225



 Score = 23.4 bits (48), Expect = 9.1
 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
 Frame = +3

Query: 351 IPYPVEKKIPY----PVKVHVPQPYP 416
           IP  +EK +PY    P  + V +P+P
Sbjct: 216 IPKVIEKPVPYTVEKPYPIEVEKPFP 241


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 360 PVEKKIPYPVKVHVPQPYP 416
           PV   +PYP+ + +P P P
Sbjct: 625 PVTILVPYPIIIPLPLPIP 643



 Score = 23.8 bits (49), Expect = 6.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 351 IPYPVEKKIPYPVKVHVP 404
           +PYP+   +P P+ V +P
Sbjct: 630 VPYPIIIPLPLPIPVPIP 647


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,906
Number of Sequences: 2352
Number of extensions: 10849
Number of successful extensions: 72
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)