Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_P03
(863 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U04810-1|AAA79333.2| 778|Homo sapiens tastin protein. 36 0.14
BC032583-1|AAH32583.1| 778|Homo sapiens trophinin associated pr... 36 0.14
AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein. 32 2.3
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 32 3.1
BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein. 32 3.1
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 32 3.1
BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein. 32 3.1
AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome proliferator... 32 3.1
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 32 3.1
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 32 3.1
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 32 3.1
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 32 3.1
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 32 3.1
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 3.1
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 32 3.1
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 3.1
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 32 3.1
BC094733-1|AAH94733.1| 138|Homo sapiens Unknown (protein for IM... 31 4.1
D83032-1|BAA11748.1| 1978|Homo sapiens nuclear protein, NP220 pr... 31 7.2
BX537425-1|CAD97667.1| 1978|Homo sapiens hypothetical protein pr... 31 7.2
BC109285-1|AAI09286.1| 392|Homo sapiens LASS6 protein protein. 31 7.2
BC109284-1|AAI09285.1| 392|Homo sapiens LASS6 protein protein. 31 7.2
BC083513-1|AAH83513.1| 1957|Homo sapiens ZNF638 protein protein. 31 7.2
BC024000-1|AAH24000.1| 814|Homo sapiens ZNF638 protein protein. 31 7.2
AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-ri... 31 7.2
AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-ri... 31 7.2
AK172775-1|BAD18757.1| 384|Homo sapiens protein ( Homo sapiens ... 31 7.2
AF534078-1|AAM97681.1| 1139|Homo sapiens putative NP220 nuclear ... 31 7.2
AC007878-1|AAF66079.1| 792|Homo sapiens unknown protein. 31 7.2
>U04810-1|AAA79333.2| 778|Homo sapiens tastin protein.
Length = 778
Score = 36.3 bits (80), Expect = 0.14
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Frame = +3
Query: 366 EKKIPYPV---KVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 536
E +IP P ++ VP+PYP + PL S C + +++ +P CP +
Sbjct: 530 EPEIPEPSLQEQLEVPEPYPPAEPRPLES---CCRSEPEIPESSRQEQLEVPEPCPPAEP 586
Query: 537 RPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXKKXPY--PVKGSRTCACSLPRIQRGTS 710
RP Y C+ + P + Q + P P + P +G PR++ G S
Sbjct: 587 RPLESY-CR-IEPEIPESSRQEQLEVPEPCPPAEPGPLQPSTQGQSGPPGPCPRVELGAS 644
Query: 711 ----TX*RSMWTDPYPCISQXXCFTXS 779
RS+ + PC SQ T S
Sbjct: 645 EPCTLEHRSLESSLPPCCSQWAPATTS 671
>BC032583-1|AAH32583.1| 778|Homo sapiens trophinin associated
protein (tastin) protein.
Length = 778
Score = 36.3 bits (80), Expect = 0.14
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Frame = +3
Query: 366 EKKIPYPV---KVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 536
E +IP P ++ VP+PYP + PL S C + +++ +P CP +
Sbjct: 530 EPEIPEPSLQEQLEVPEPYPPAEPRPLES---CCRSEPEIPESSRQEQLEVPEPCPPAEP 586
Query: 537 RPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXKKXPY--PVKGSRTCACSLPRIQRGTS 710
RP Y C+ + P + Q + P P + P +G PR++ G S
Sbjct: 587 RPLESY-CR-IEPEIPESSRQEQLEVPEPCPPAEPGPLQPSTQGQSGPPGPCPRVELGAS 644
Query: 711 ----TX*RSMWTDPYPCISQXXCFTXS 779
RS+ + PC SQ T S
Sbjct: 645 EPCTLEHRSLESSLPPCCSQWAPATTS 671
>AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein.
Length = 440
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/64 (31%), Positives = 25/64 (39%)
Frame = +3
Query: 360 PVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTR 539
P +P P + P P T P P GT TLP+ + P T PS +T
Sbjct: 221 PATGTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTL 280
Query: 540 PRSR 551
P R
Sbjct: 281 PTPR 284
>BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,
coactivator-related 1 protein.
Length = 1664
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 293 PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 457
P + + E+ + PR K PLP K P PR+S T+P+L + +L++LS
Sbjct: 1095 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 1144
>BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein.
Length = 1542
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 293 PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 457
P + + E+ + PR K PLP K P PR+S T+P+L + +L++LS
Sbjct: 975 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 1024
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 3.1
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +3
Query: 366 EKKIPYPVKVHVPQPYPXC-QTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP----SR 530
E + P P K H P P P QT P +G SS P R++ PST P SR
Sbjct: 672 EARSPQPNKRHSPSPRPRAPQTSSSPP-PVRRGASSS----PQRRQSPSPSTRPIRRVSR 726
Query: 531 QTRPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXKKXPYP 653
P+ + +P + + S+ +P KK P P
Sbjct: 727 TPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAP 767
>BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein.
Length = 659
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 293 PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 457
P + + E+ + PR K PLP K P PR+S T+P+L + +L++LS
Sbjct: 100 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 149
>AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 631
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 293 PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 457
P + + E+ + PR K PLP K P PR+S T+P+L + +L++LS
Sbjct: 62 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 111
>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 1664
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 293 PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 457
P + + E+ + PR K PLP K P PR+S T+P+L + +L++LS
Sbjct: 1095 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 1144
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 3.1
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +3
Query: 366 EKKIPYPVKVHVPQPYPXC-QTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP----SR 530
E + P P K H P P P QT P +G SS P R++ PST P SR
Sbjct: 672 EARSPQPNKRHSPSPRPRAPQTSSSPP-PVRRGASSS----PQRRQSPSPSTRPIRRVSR 726
Query: 531 QTRPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXKKXPYP 653
P+ + +P + + S+ +P KK P P
Sbjct: 727 TPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAP 767
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.9 bits (69), Expect = 3.1
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +3
Query: 366 EKKIPYPVKVHVPQPYPXC-QTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP----SR 530
E + P P K H P P P QT P +G SS P R++ PST P SR
Sbjct: 681 EARSPQPNKRHSPSPRPRAPQTSSSPP-PVRRGASSS----PQRRQSPSPSTRPIRRVSR 735
Query: 531 QTRPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXKKXPYP 653
P+ + +P + + S+ +P KK P P
Sbjct: 736 TPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAP 776
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 3.1
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +3
Query: 366 EKKIPYPVKVHVPQPYPXC-QTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP----SR 530
E + P P K H P P P QT P +G SS P R++ PST P SR
Sbjct: 672 EARSPQPNKRHSPSPRPRAPQTSSSPP-PVRRGASSS----PQRRQSPSPSTRPIRRVSR 726
Query: 531 QTRPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXKKXPYP 653
P+ + +P + + S+ +P KK P P
Sbjct: 727 TPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAP 767
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.9 bits (69), Expect = 3.1
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +3
Query: 366 EKKIPYPVKVHVPQPYPXC-QTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP----SR 530
E + P P K H P P P QT P +G SS P R++ PST P SR
Sbjct: 681 EARSPQPNKRHSPSPRPRAPQTSSSPP-PVRRGASSS----PQRRQSPSPSTRPIRRVSR 735
Query: 531 QTRPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXKKXPYP 653
P+ + +P + + S+ +P KK P P
Sbjct: 736 TPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAP 776
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 3.1
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +3
Query: 366 EKKIPYPVKVHVPQPYPXC-QTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP----SR 530
E + P P K H P P P QT P +G SS P R++ PST P SR
Sbjct: 670 EARSPQPNKRHSPSPRPRAPQTSSSPP-PVRRGASSS----PQRRQSPSPSTRPIRRVSR 724
Query: 531 QTRPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXKKXPYP 653
P+ + +P + + S+ +P KK P P
Sbjct: 725 TPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAP 765
>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
protein.
Length = 1664
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 293 PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 457
P + + E+ + PR K PLP K P PR+S T+P+L + +L++LS
Sbjct: 1095 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 1144
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 3.1
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +3
Query: 366 EKKIPYPVKVHVPQPYPXC-QTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP----SR 530
E + P P K H P P P QT P +G SS P R++ PST P SR
Sbjct: 670 EARSPQPNKRHSPSPRPRAPQTSSSPP-PVRRGASSS----PQRRQSPSPSTRPIRRVSR 724
Query: 531 QTRPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXKKXPYP 653
P+ + +P + + S+ +P KK P P
Sbjct: 725 TPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAP 765
>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
Length = 1666
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 293 PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 457
P + + E+ + PR K PLP K P PR+S T+P+L + +L++LS
Sbjct: 1097 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 1146
>BC094733-1|AAH94733.1| 138|Homo sapiens Unknown (protein for
IMAGE:30337465) protein.
Length = 138
Score = 31.5 bits (68), Expect = 4.1
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = +3
Query: 402 PQPYPXCQTCPLPS*RDCQGTSSRTATL-PSRKEGALPST---CPSRQTRPRSRYMCQNL 569
P P CP D G ++R A L SR+ G+ P T P ++R R + +L
Sbjct: 20 PGREPRAPRCP-----DGGGVAARAARLLSSRRSGSWPPTHALWPDLRSRARRLLLFLSL 74
Query: 570 TPLKRKFMFQSKCTCPAPYQXXKKXPYPVKGSRTCACSLPR 692
L ++C P+P P+P++ + T A S PR
Sbjct: 75 ADL-----LSARCP-PSPTPAPSSGPWPLRSTCTSASSAPR 109
>D83032-1|BAA11748.1| 1978|Homo sapiens nuclear protein, NP220
protein.
Length = 1978
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 365 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 529
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 530 TDPS 541
S
Sbjct: 538 RSRS 541
>BX537425-1|CAD97667.1| 1978|Homo sapiens hypothetical protein
protein.
Length = 1978
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 365 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 529
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 530 TDPS 541
S
Sbjct: 538 RSRS 541
>BC109285-1|AAI09286.1| 392|Homo sapiens LASS6 protein protein.
Length = 392
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 732 STWTFXWYLYLFVYGVR 682
S W F +YLY+F YGVR
Sbjct: 135 SMWRFSFYLYVFTYGVR 151
>BC109284-1|AAI09285.1| 392|Homo sapiens LASS6 protein protein.
Length = 392
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 732 STWTFXWYLYLFVYGVR 682
S W F +YLY+F YGVR
Sbjct: 135 SMWRFSFYLYVFTYGVR 151
>BC083513-1|AAH83513.1| 1957|Homo sapiens ZNF638 protein protein.
Length = 1957
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 365 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 529
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 530 TDPS 541
S
Sbjct: 538 RSRS 541
>BC024000-1|AAH24000.1| 814|Homo sapiens ZNF638 protein protein.
Length = 814
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 365 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 529
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 530 TDPS 541
S
Sbjct: 538 RSRS 541
>AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 30.7 bits (66), Expect = 7.2
Identities = 26/101 (25%), Positives = 37/101 (36%)
Frame = +3
Query: 387 VKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRSRYMCQN 566
++ HV +P P CP C + + P+ + P C S + RPR
Sbjct: 370 LRPHV-EPRPLPSFCPPRRLDQCPESPLQRCPPPAPRPRLRPEPCISLEPRPR------- 421
Query: 567 LTPLKRKFMFQSKCTCPAPYQXXKKXPYPVKGSRTCACSLP 689
PL R+ C P P + P PV R C +P
Sbjct: 422 --PLPRQ--LSEPCLYPEPLPALRPTPRPVPLPRPGQCEIP 458
>AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 30.7 bits (66), Expect = 7.2
Identities = 26/101 (25%), Positives = 37/101 (36%)
Frame = +3
Query: 387 VKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRSRYMCQN 566
++ HV +P P CP C + + P+ + P C S + RPR
Sbjct: 370 LRPHV-EPRPLPSFCPPRRLDQCPESPLQRCPPPAPRPRLRPEPCISLEPRPR------- 421
Query: 567 LTPLKRKFMFQSKCTCPAPYQXXKKXPYPVKGSRTCACSLP 689
PL R+ C P P + P PV R C +P
Sbjct: 422 --PLPRQ--LSEPCLYPEPLPALRPTPRPVPLPRPGQCEIP 458
>AK172775-1|BAD18757.1| 384|Homo sapiens protein ( Homo sapiens
cDNA FLJ23936 fis, clone COLF1951. ).
Length = 384
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 732 STWTFXWYLYLFVYGVR 682
S W F +YLY+F YGVR
Sbjct: 135 SMWRFSFYLYVFTYGVR 151
>AF534078-1|AAM97681.1| 1139|Homo sapiens putative NP220 nuclear
protein isoform protein.
Length = 1139
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 365 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 529
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 530 TDPS 541
S
Sbjct: 538 RSRS 541
>AC007878-1|AAF66079.1| 792|Homo sapiens unknown protein.
Length = 792
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 365 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 529
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 530 TDPS 541
S
Sbjct: 538 RSRS 541
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,654,555
Number of Sequences: 237096
Number of extensions: 1785368
Number of successful extensions: 5666
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5604
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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