Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_P03
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 33 0.35
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 32 0.61
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 3.2
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 28 9.9
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 28 9.9
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 28 9.9
AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein. 28 9.9
AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle defec... 28 9.9
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 1/102 (0%)
Frame = +3
Query: 354 PYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ 533
P P+ K +P+P + P+P P + P + + P K P P +
Sbjct: 132 PMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPKPMPKHK 191
Query: 534 TRPRSRYMC-QNLTPLKRKFMFQSKCTCPAPYQXXKKXPYPV 656
+P + M P+ + F P P K P P+
Sbjct: 192 PKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPKPFPKPM 233
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/64 (25%), Positives = 25/64 (39%)
Frame = +3
Query: 354 PYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ 533
P P K +P P+ H P+P+P P P + P K +P P +
Sbjct: 210 PMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLK 269
Query: 534 TRPR 545
+P+
Sbjct: 270 LKPK 273
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 7/108 (6%)
Frame = +3
Query: 354 PYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRK------EGALPS 515
P P K P+P + P+P P + P P +P K +P
Sbjct: 114 PMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPF 173
Query: 516 TCPSRQTRPRSRYMCQNL-TPLKRKFMFQSKCTCPAPYQXXKKXPYPV 656
P + +P+ + M ++ P + +F P P K P P+
Sbjct: 174 PKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPM 221
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 323 SRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKR 451
S S PRR+ P ++ PR + RSP+ PR +S + ++R
Sbjct: 88 SASPPRRRRDDSPRKRSRSPPRRTRRSPSPPRRRRISRSPVRR 130
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 354 PYPVEKKIPYPVKVHVPQPYPXCQTCPLP 440
P PV +P PV V +P P P P+P
Sbjct: 12 PVPVPAPVPQPVPVPMPMPMPMPMPMPVP 40
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 351 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDC 455
+P PV + +P P+ + +P P P P+P +C
Sbjct: 15 VPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQSNC 49
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 354 PYPVEKKIPYPVKVHVPQPYPXCQTCPLP 440
P P+ P PV VPQP P P+P
Sbjct: 4 PIPIPIPAPVPVPAPVPQPVPVPMPMPMP 32
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 351 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 440
IP PV P P V VP P P P+P
Sbjct: 9 IPAPVPVPAPVPQPVPVPMPMPMPMPMPMP 38
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 351 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 440
IP P+ +P P V P P P P+P
Sbjct: 5 IPIPIPAPVPVPAPVPQPVPVPMPMPMPMP 34
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 351 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 440
IP P +P PV VP P P P+P
Sbjct: 7 IPIPAPVPVPAPVPQPVPVPMPMPMPMPMP 36
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 351 IPYPVEKKIPYPVKVHVPQPYP 416
+P PV ++P P++V VP P P
Sbjct: 156 VPVPVPVQVPVPIRVPVPVPVP 177
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 357 YPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPS 527
YP+ +I YP ++ +P P QT P P+ +R +T+P P PS
Sbjct: 315 YPMISEIRYP-DLNTMRPEPTAQTPPAPAAPPAAPALNRQSTIPPVAMTQRPMIPPS 370
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 338 RRKAHPLPGRKENPL--PRESARSP--TLPRLSNMSLTQLKRLSRYQFTYRNPTQSKRR 502
+R+ P P R+ P PR+ +RSP PR S + ++LSR + R+ + + R
Sbjct: 153 KRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSSSRSKSPRRSR 211
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 338 RRKAHPLPGRKENPL--PRESARSP--TLPRLSNMSLTQLKRLSRYQFTYRNPTQSKRR 502
+R+ P P R+ P PR+ +RSP PR S + ++LSR + R+ + + R
Sbjct: 153 KRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSSSRSKSPRRSR 211
>AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein.
Length = 529
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +3
Query: 486 PSRKEGALPSTCPSRQTRPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXK 638
P+R++ P T + T+P + + TP+ ++ M S P K
Sbjct: 470 PTRRQAVGPKTSSPKDTQPSTSSSSRTTTPMSKRAMTPSSIASSTPSSAKK 520
>AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle
defective protein 1 protein.
Length = 529
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +3
Query: 486 PSRKEGALPSTCPSRQTRPRSRYMCQNLTPLKRKFMFQSKCTCPAPYQXXK 638
P+R++ P T + T+P + + TP+ ++ M S P K
Sbjct: 470 PTRRQAVGPKTSSPKDTQPSTSSSSRTTTPMSKRAMTPSSIASSTPSSAKK 520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,125,533
Number of Sequences: 27780
Number of extensions: 247733
Number of successful extensions: 969
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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