Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P03
         (863 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g66850.1 68418.m08428 protein kinase family protein contains ...    30   1.7  
At1g20130.1 68414.m02518 family II extracellular lipase, putativ...    30   2.3  
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ...    29   4.0  
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ...    29   4.0  
At5g15510.1 68418.m01816 expressed protein                             29   5.3  
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t...    29   5.3  
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex...    28   7.0  
At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid t...    28   9.2  
At3g01015.1 68416.m00001 expressed protein ; expression supporte...    28   9.2  
At1g49770.1 68414.m05581 basic helix-loop-helix (bHLH) family pr...    28   9.2  

>At5g66850.1 68418.m08428 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain; identical
           to cDNA MAP3K gamma protein kinase GI:2315152
          Length = 716

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 293 PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLS 424
           PQ R+ R +     P R + PL     +  PR+S  SP  PRLS
Sbjct: 253 PQPRSPRKQIRSPQPSRPSSPLHSVDSSAPPRDSVSSPLHPRLS 296


>At1g20130.1 68414.m02518 family II extracellular lipase, putative
           contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
          Length = 1006

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/53 (30%), Positives = 17/53 (32%)
 Frame = +1

Query: 697 KEVQVPXKGPCGQTXTRAYPKXSALPXREAGPXPGRKTVPYPXNSPLXPXARP 855
           K V  P   PC     +  PK    P     P P  K  P P   P  P   P
Sbjct: 21  KPVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACPPTPP 73



 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +1

Query: 727 CGQTXTRAYPKXSALPXREAGPXPGRKTVPYP-XNSPLXPXARPV 858
           C  T  +  PK +  P  +  P P  K VP P    P  P  +PV
Sbjct: 68  CPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPV 112


>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 407

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = +2

Query: 326 RSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLSRYQFTYRNPTQSK 496
           R  P R+  PLP R+ +P PR     P    +   S + ++R  R + +  +P + +
Sbjct: 292 RGSPVRRRSPLPLRRRSPPPRRLRSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGR 348


>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 414

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = +2

Query: 326 RSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLSRYQFTYRNPTQSK 496
           R  P R+  PLP R+ +P PR     P    +   S + ++R  R + +  +P + +
Sbjct: 299 RGSPVRRRSPLPLRRRSPPPRRLRSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGR 355


>At5g15510.1 68418.m01816 expressed protein
          Length = 497

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 344 KAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRL 454
           KA P+P      +PR S++ PT PR     + Q K++
Sbjct: 438 KAQPMPYFDRPFIPRRSSKHPTAPRDPKFHIPQHKKI 474


>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein identical to
           pEARLI 1 (Accession No. L43080): an Arabidopsis member
           of a conserved gene family (PGF95-099), Plant Physiol.
           109 (4), 1497 (1995); contains Pfam protease
           inhibitor/seed storage/LTP family domain PF00234
          Length = 168

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 326 RSLPRRKAHPLPGRKENPLPRESARSPTLP 415
           + +P  K  P+P  K  P+P  S  SP++P
Sbjct: 37  KPVPSPKPKPVPSPKPKPVPSPSVPSPSVP 66


>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
           extensin family protein contains similarity to disease
           resistance protein GI:3894383 from [Lycopersicon
           esculentum]; contains leucine-rich repeats,
           Pfam:PF00560; contains proline rich extensin domains,
           INTERPRO:IPR002965
          Length = 847

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
 Frame = +3

Query: 384 PVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRS--RYM 557
           P     P P       P PS    Q         P+  + + PS+ P++   P S   Y 
Sbjct: 653 PTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQ 712

Query: 558 CQNLTPLKRKFMFQSKCT 611
             NL+P++     Q+  T
Sbjct: 713 APNLSPVQAPTPVQAPTT 730


>At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to pEARLI
           1 (Accession No. L43080): an Arabidopsis member of a
           conserved gene family (PGF95-099), Plant Physiol. 109
           (4), 1497 (1995); contains Pfam protease inhibitor/seed
           storage/LTP family domain PF00234
          Length = 161

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = +3

Query: 378 PYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP 524
           P P    VP P P    CP P        + R  T P R  G+  ++CP
Sbjct: 32  PSPKPKPVPSPKPKPVQCPPPPRPSVPSPNPRPVT-PPRTPGSSGNSCP 79


>At3g01015.1 68416.m00001 expressed protein ; expression supported
           by MPSS
          Length = 488

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 344 KAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRL 454
           KA P+P      +P+ S + PT+PR    ++ Q K++
Sbjct: 428 KAQPMPYFDRPFIPKRSNKHPTVPRDPKFNIPQHKKI 464


>At1g49770.1 68414.m05581 basic helix-loop-helix (bHLH) family
           protein contains similarity to putative bHLH
           transcription factor GB:AAC63587 GI:3738090 from
           [Arabidopsis thaliana]
          Length = 308

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 724 PCGQTXTRAYPKXSALPXREAGPXPGRKTVPYPXNSPL 837
           P   T T +YP+ + L  + +        +PYP N P+
Sbjct: 170 PIDATATDSYPRAAFLADQVSSSSAAAANLPYPCNDPI 207


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,510,174
Number of Sequences: 28952
Number of extensions: 236598
Number of successful extensions: 748
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)