Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P02
         (1104 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    30   4.9  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    30   4.9  
AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA...    30   6.5  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 23/93 (24%), Positives = 25/93 (26%), Gaps = 1/93 (1%)
 Frame = +3

Query: 618 PFFPPXXKXXXXXPKXSPXKXXGPGXXKXXPKXGFXPXXXP-PXXFXXXXXPXXPPXXXF 794
           P  PP        P   P    GP      P+    P   P P        P  PP   +
Sbjct: 303 PPAPPAGPTYQPRPPAPPAPAPGP---TYQPRPPAPPAPAPGPTYQPRPPSPPAPPAPTY 359

Query: 795 XXXPPXXPXKXXXXXXXXXPXGPPXXGGXXGPP 893
              PP  P           P  PP      GPP
Sbjct: 360 QPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPP 392


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 23/93 (24%), Positives = 25/93 (26%), Gaps = 1/93 (1%)
 Frame = +3

Query: 618 PFFPPXXKXXXXXPKXSPXKXXGPGXXKXXPKXGFXPXXXP-PXXFXXXXXPXXPPXXXF 794
           P  PP        P   P    GP      P+    P   P P        P  PP   +
Sbjct: 303 PPAPPAGPTYQPRPPAPPAPAPGP---TYQPRPPAPPAPAPGPTYQPRPPSPPAPPAPTY 359

Query: 795 XXXPPXXPXKXXXXXXXXXPXGPPXXGGXXGPP 893
              PP  P           P  PP      GPP
Sbjct: 360 QPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPP 392


>AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA
           protein.
          Length = 707

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 17/66 (25%), Positives = 20/66 (30%)
 Frame = +3

Query: 621 FFPPXXKXXXXXPKXSPXKXXGPGXXKXXPKXGFXPXXXPPXXFXXXXXPXXPPXXXFXX 800
           + PP        PK  P      G     P   F P   PP  +     P  PP   +  
Sbjct: 402 YLPPPKPTNPPQPKYLPPPQPKSGYDYPKPAIPFPPPTNPPQKYLPPVVPTSPPQPKY-- 459

Query: 801 XPPXXP 818
            PP  P
Sbjct: 460 LPPPKP 465


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,606,527
Number of Sequences: 53049
Number of extensions: 286798
Number of successful extensions: 417
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5739749274
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)