Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_P01
(835 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 25 0.74
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 3.0
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 23 3.9
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 23 3.9
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 21 9.1
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 21 9.1
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 21 9.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.1
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 25.0 bits (52), Expect = 0.74
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +2
Query: 425 RIRKALQMSLSTNLPCRSKQHRYFTLHCITREDNK 529
R+RK L + +S + ++ +F +HC+ +E +
Sbjct: 62 RLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = -1
Query: 583 SKSIDIMLIISKLTTSNTFIVFSGDAVQSKVPVLFAATWEIGAK 452
+K + ++ + L N+ + FS K+P A W++ K
Sbjct: 505 AKLLSVLTELRTLGNQNSEMCFSLKLKNKKLPPFLAEIWDVDLK 548
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 22.6 bits (46), Expect = 3.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 300 VSDEGKFSRYSVSNSNTFRFFCLGFTASEGIGPI 199
VS+ G FSR++ + + CL TA E PI
Sbjct: 163 VSNSGSFSRHAHPDDCRKYYICLEGTAREYGCPI 196
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 22.6 bits (46), Expect = 3.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 300 VSDEGKFSRYSVSNSNTFRFFCLGFTASEGIGPI 199
VS+ G FSR++ + + CL TA E PI
Sbjct: 163 VSNSGSFSRHAHPDDCRKYYICLEGTAREYGCPI 196
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 21.4 bits (43), Expect = 9.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 474 AANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDF 581
AA S G C S + KV + N DMIN+++ DF
Sbjct: 178 AAVSGGIASCKLSYD-IAKVAE--NLDMINVMAYDF 210
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 21.4 bits (43), Expect = 9.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 474 AANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDF 581
AA S G C S + KV + N DMIN+++ DF
Sbjct: 179 AAVSGGIASCKLSYD-IAKVAE--NLDMINVMAYDF 211
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 21.4 bits (43), Expect = 9.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 474 AANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDF 581
AA S G C S + KV + N DMIN+++ DF
Sbjct: 179 AAVSGGIASCKLSYD-IAKVAE--NLDMINVMAYDF 211
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 423 IEFVKHFRCHLAPISHVAANSTGTLLCTASPEK 521
I+FV I+H+ A++ L CT E+
Sbjct: 1340 IQFVAMLFHRFGTIAHILASTELNLCCTKKKEE 1372
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 423 IEFVKHFRCHLAPISHVAANSTGTLLCTASPEK 521
I+FV I+H+ A++ L CT E+
Sbjct: 1340 IQFVAMLFHRFGTIAHILASTELNLCCTKKKEE 1372
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 423 IEFVKHFRCHLAPISHVAANSTGTLLCTASPEK 521
I+FV I+H+ A++ L CT E+
Sbjct: 1340 IQFVAMLFHRFGTIAHILASTELNLCCTKKKEE 1372
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 423 IEFVKHFRCHLAPISHVAANSTGTLLCTASPEK 521
I+FV I+H+ A++ L CT E+
Sbjct: 1340 IQFVAMLFHRFGTIAHILASTELNLCCTKKKEE 1372
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,442
Number of Sequences: 336
Number of extensions: 3173
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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