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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O23
         (849 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.)             241   4e-64
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.17 
SB_5574| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.39 
SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.68 
SB_34973| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.89 
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)                    31   0.89 
SB_912| Best HMM Match : No HMM Matches (HMM E-Value=.)                31   0.89 
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.2  
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)          31   1.6  
SB_34751| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.6  
SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041)                 30   2.1  
SB_38055| Best HMM Match : zf-CW (HMM E-Value=1.9)                     30   2.7  
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)                29   3.6  
SB_51968| Best HMM Match : PT (HMM E-Value=0.54)                       29   3.6  
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)           29   3.6  
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.8  
SB_38025| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9)                   29   4.8  
SB_35983| Best HMM Match : Ice_nucleation (HMM E-Value=0.42)           29   4.8  
SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013)                   29   4.8  
SB_20744| Best HMM Match : CH (HMM E-Value=0.92)                       29   4.8  
SB_4395| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.8  
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.3  
SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8)                     29   6.3  
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.3  
SB_59186| Best HMM Match : rve (HMM E-Value=0.00029)                   28   8.3  
SB_8467| Best HMM Match : rve (HMM E-Value=2.4e-13)                    28   8.3  
SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.3  
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)                    28   8.3  
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)            28   8.3  

>SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 156

 Score =  241 bits (591), Expect = 4e-64
 Identities = 123/149 (82%), Positives = 134/149 (89%)
 Frame = +1

Query: 154 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 333
           + P Y  FFGVMGA +A++FSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII
Sbjct: 5   DQPSYVAFFGVMGATAAMVFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 64

Query: 334 AIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQ 513
           AIYGLVVAVLI  ++ +  +Y LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTAQ
Sbjct: 65  AIYGLVVAVLIGSSISK--DYTLYKSFLDLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQ 122

Query: 514 QPRLFVGMILILIFAEVLGLYGLIVAIYL 600
           QPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 123 QPRLFVGMILILIFAEVLGLYGLIVALIL 151


>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1574

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -3

Query: 637  REWCVF---RAFILCTGRWRR*VRKDPILQRK*E*ESFRRIT*AAEQYHARLHLP 482
            R WCV+   R+ I CT RW R V   P  + +   +S RR+    E   + L+ P
Sbjct: 931  RGWCVYHMGRSLIACTRRWMRKVACSPSKETRPHRQSSRRLASQQESQQSLLNAP 985


>SB_5574| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 388

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -1

Query: 354 HDQTVDGNNTRHDDRNDRLHDQLRP---HHRHGGNTSS*LGSPIGSSQGAEDDSRRRPHN 184
           HD T     T   D +  +HD  R    + RHG   ++   + + + +   D +R  PHN
Sbjct: 304 HDTTRTARYTTRLDTDRTIHDTARHGPLYTRHGSIRTAQYTTRLDTDRSIHDTARYGPHN 363

Query: 183 SKEGS 169
           +++GS
Sbjct: 364 TRQGS 368


>SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 501

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 20/52 (38%), Positives = 22/52 (42%)
 Frame = -1

Query: 360 DSHDQTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAEDD 205
           DSHD   DG +  HDD  D  HD    H   G  T S     I  S  + DD
Sbjct: 36  DSHDDIDDGTDD-HDDTGD--HDGTDDHDDTGDGTDSHADDDIDDSTDSHDD 84


>SB_34973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 427

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
 Frame = +1

Query: 40  LGHICLCKSSFVE*VCADSHHSF--WDL*ILPHLTNKMAENNPIYGPFFGVMGAASAIIF 213
           L H+ L KS   +  C DS HSF  W   +L  +      N P+  P      A S +  
Sbjct: 285 LNHLVLPKSRKKKISCVDSLHSFAQWQNVMLETIYTNQVLNFPLAEP------AVSGLYG 338

Query: 214 SALGAAYGTAKSGTGIAAMSVMRP--ELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEP 387
           S + A   T +   G  A S++ P    + + ++  VM GI  +  L  A     + ++P
Sbjct: 339 SGVAALGITEQLQKGQEASSIVHPSDHDLYQRLMDAVMEGIHKVESLSSASKKESSKEKP 398

Query: 388 AN 393
            N
Sbjct: 399 KN 400


>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
          Length = 1338

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = -1

Query: 378  EGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAEDDSR 199
            E  +++  HD   D  N+    R  R   + +    H GN S+  GS I +S G  +   
Sbjct: 840  EKHTSRPRHDSKSDKKNSDDKHRRHRRRREKKKQRHHSGNDST--GSDIPASPGIANSPA 897

Query: 198  RRPHNSK 178
             RP  S+
Sbjct: 898  SRPSPSR 904


>SB_912| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 116

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 424 GAGLAVGFSGLAAGFAIGIVG 486
           GAG+ VGF  LA G  +G+VG
Sbjct: 46  GAGMTVGFCNLACGICVGLVG 66


>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3261

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 306  HSCRHGGYYCHLRSGRGCPDCWCPPGASQLPPLQRV 413
            + CR+ G  C +   R  P C CPPG       QRV
Sbjct: 2981 YKCRYQGEVC-VTDSRNVPRCVCPPGCPPAEVSQRV 3015


>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
          Length = 295

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 545 IRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAP 423
           ++I+P N +     PR P + T P   P   P  PT  P P
Sbjct: 205 VKILPGNGVVPTQAPRPPTTQTPPTKAPTDPPVPPTNPPVP 245


>SB_34751| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1143

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 471 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTV 340
           G+   +T  SYS  S+QV +PF    V        +QD H+QT+
Sbjct: 713 GDVQKETTGSYSCNSSQVFDPFTLQCVNLPQPIKQHQDKHNQTL 756



 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 471 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTV 340
           G+   +T  SYS  S+QV +PF    V        +QD H+QT+
Sbjct: 44  GDVQKETTGSYSCNSSQVFDPFTLQCVNLPQLIKQHQDKHNQTL 87


>SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
          Length = 1155

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 497  TPASPTMPMAKPAARPENPTAKPAPKWMNPL 405
            TPA PT+PMA   A  + P+  PA     PL
Sbjct: 1095 TPALPTIPMAPSGAPAKTPSVAPAAPSPRPL 1125


>SB_38055| Best HMM Match : zf-CW (HMM E-Value=1.9)
          Length = 439

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = -3

Query: 505 YHARLHLPRCLWRNRQPDQRILQPNQHPSG*TLCKGGSWLAPGGHQQSGQ--PRPDRRW 335
           YHA+  + +C    ++P   +L   Q  S    C       PGGHQ   Q   R   RW
Sbjct: 264 YHAKNQVVKCYQPGKEPGGHLLPTYQAKSQAVKCYYIPGKEPGGHQAKNQAVTRQRTRW 322


>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1199

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 324 RHDDR-NDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAEDDSRRRPHNSKEGS 169
           +H DR ND      + H RHG  T S   SP G S+ ++D +      S+E S
Sbjct: 175 QHVDRENDMELSSRKTHGRHGERTESRFHSP-GRSKSSDDPAEPAKDQSRETS 226


>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3592

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 490  HLPRCLWRNRQPDQRILQPNQHPSG*TLCKGGSWLAPG-GHQQSGQ 356
            ++   +++  Q +Q +L  NQ PS  T+  GGS    G GH   GQ
Sbjct: 2347 YVSHTVFKREQDEQLLLWLNQRPSDWTMTWGGSGTIYGWGHNHRGQ 2392


>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
          Length = 156

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 494 PASPTMPMAKPAARPENPTAKPAPK 420
           PA+P  P A PAA P  PTA PA +
Sbjct: 52  PAAPVTPTAAPAA-PVTPTAAPAAR 75



 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -2

Query: 494 PASPTMPMAKPAARPENPTAKPA 426
           PA+P  P A PAAR   PTA PA
Sbjct: 62  PAAPVTPTAAPAAR-VTPTAAPA 83


>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
          Length = 514

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -2

Query: 572 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 405
           +P T+ K R    PT +L      +   +PT   AKP      PT +P  K   PL
Sbjct: 135 KPKTTVKRRPTERPTKSLLPEEEEKERQTPTPTKAKPTTIKRRPTERPTKKPTKPL 190


>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 979

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 306 HSCRHGGYYCHLRSGRGCPDCW 371
           +SC  G YYC++   RG  DCW
Sbjct: 348 YSCNSGHYYCYV---RGSNDCW 366


>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
          Length = 404

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 494 PASPTMPMAKPAARPENPTAKPAPK 420
           PA+P  P A PAA P  PTA PA +
Sbjct: 209 PAAPVTPTAAPAA-PVTPTAAPAAR 232



 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -2

Query: 494 PASPTMPMAKPAARPENPTAKPA 426
           PA+P  P A PAAR   PTA PA
Sbjct: 219 PAAPVTPTAAPAAR-VTPTAAPA 240


>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 824

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
 Frame = -1

Query: 516 LLSSTTHACISHDAY---GETGSQTRESYSQTSTQVDEPFVKGVVG--WLLEGTSNQDSH 352
           L  + TH    HD +     T   TR       T  ++       G    L  T+  D+H
Sbjct: 495 LYDTHTHETTRHDTHLHDMHTHETTRHDTHLHDTTENDTHPHDTTGNDTYLHDTTENDTH 554

Query: 351 DQTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAED--DSRRRPHNSK 178
                GN+T+    +D   ++ RPH   G +T   L    G+     D  ++  +PH++ 
Sbjct: 555 PHDTTGNDTQ---LHDTTGNKTRPHDTTGNDTH--LHDTTGNDTRPHDTTENDTQPHDTT 609

Query: 177 E 175
           E
Sbjct: 610 E 610


>SB_38025| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 870

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +2

Query: 11  MTHSVESCKAWAIFVCAKVVSWSECVQIVITAFGTCK--YSHI*QTKWLKIIQSTDPSLE 184
           ++ +V  C+   +  CA V SW + + I++ A G C+   + I   + L   +     ++
Sbjct: 22  LSSAVHGCRTARVIDCASVPSWPDGLSIIL-ARGKCRIALASIQAGRGLYSREKKTLVMK 80

Query: 185 LWGRR 199
           +WG+R
Sbjct: 81  IWGKR 85


>SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9)
          Length = 233

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -2

Query: 533 PTNNLGC*AVPRTPASP--TMPMAKPAARPENPTAKPAP 423
           P+NN G  A P TPA+P   M +A P+      T  P P
Sbjct: 87  PSNNFGTPATPATPATPAHNMGVAGPSGMATPGTFIPPP 125


>SB_35983| Best HMM Match : Ice_nucleation (HMM E-Value=0.42)
          Length = 216

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -1

Query: 354 HDQTVDGNNTRHDDRNDRLHDQLR--PHH-RHGGNTSS*LGSPIGSSQGAEDDSRRRPHN 184
           HD     ++T      D  HD  R  PH+ RHG   ++   + + + +   D +R  P  
Sbjct: 65  HDTNSTIHDTARQGPRDTRHDTARYGPHNTRHGSTRTALYTTRLDTDRTIHDKARHGPLG 124

Query: 183 SKEGSV 166
           ++ GS+
Sbjct: 125 TRHGSI 130


>SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013)
          Length = 611

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
 Frame = +1

Query: 40  LGHICLCKSSFVE*VCADSHHSF--WDL*ILPHLTNKMAENNPIYGPFFGVMGAASAIIF 213
           L H+ L +S   +  C DS HSF  W   +L  +      N P+  P      A S +  
Sbjct: 469 LNHLVLPESREKKISCVDSLHSFAQWQNVMLETIYTNQVLNFPLAEP------AVSGLYG 522

Query: 214 SALGAAYGTAKSGTGIAAMSVMRP--ELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEP 387
           S + A   T +   G  A S++ P    + + +   VM GI  +  L  A     + ++P
Sbjct: 523 SGVAALGITEQLQKGQKASSIVHPLDHDLYQRLRDAVMEGICKVESLSSASKKESSKEKP 582

Query: 388 AN 393
            N
Sbjct: 583 KN 584


>SB_20744| Best HMM Match : CH (HMM E-Value=0.92)
          Length = 1103

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 348 QTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAEDD 205
           +T+      +  RN       RPH +HGG T S  G P+ +S   + D
Sbjct: 569 RTLSATGCSYQSRNIPSFSTSRPHDKHGGQTYS-SGLPVSNSIHQDKD 615


>SB_4395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 74

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 669 IMSIEARSTGDGSGVCSGRLFCVQVDGDDKSVKTQYFSENKNKN 538
           + ++  +STGD S VC G +F    D   K +  Q   E K  N
Sbjct: 15  LSALNKKSTGDKSWVCFGNMFMKLPDSKTKDMIIQGLQEVKGFN 58


>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1870

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = -2

Query: 506  VPRTPAS-PTMPMAKPAARPENPTAKPAPKWMNP 408
            +P TP   P  P   P  RP  PT +P P    P
Sbjct: 1354 IPSTPRPRPPTPPRPPTPRPRPPTPRPGPPTPRP 1387


>SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8)
          Length = 355

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = -2

Query: 530 TNNLGC*AVPRTPASPTMPMAKPA--ARPENPTAKPAPKWMNPL*RG*LAGSWRAPAIRT 357
           +NN G  A P TPA+  +P+A P+  A P   T  PAP +  P      A  +   ++  
Sbjct: 220 SNNFGTPATPATPAN-GVPIAGPSGMATPGAFTPPPAPVFTPPPPYRTTAKPFPKMSLTP 278

Query: 356 ATTRP*MAIIPAMTTGMIDFMISS 285
              +P +   P +T   ++ ++ S
Sbjct: 279 TPKKPPVPKKPVLTPAQLEGLLKS 302


>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 705

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/73 (20%), Positives = 31/73 (42%)
 Frame = -1

Query: 381 LEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAEDDS 202
           +   +N D++    D NN  + D N+  ++    ++ +  N S    S   S   ++++S
Sbjct: 581 INNANNNDNNSDNNDNNNDNNSDNNNNNNNNNNNNNNNNDNNSD-NNSDNNSDNNSDNNS 639

Query: 201 RRRPHNSKEGSVD 163
                N+ E   D
Sbjct: 640 DNNNDNNSERGAD 652


>SB_59186| Best HMM Match : rve (HMM E-Value=0.00029)
          Length = 346

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 497 TPASPTMPMAKPAARPENPTAKPAPKWMNPL 405
           TPA PT+P A   A  + P+  PA     PL
Sbjct: 286 TPALPTIPQAPSGAPAKTPSVAPAAPSPRPL 316


>SB_8467| Best HMM Match : rve (HMM E-Value=2.4e-13)
          Length = 347

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 497 TPASPTMPMAKPAARPENPTAKPAPKWMNPL 405
           TPA PT+P A   A  + P+  PA     PL
Sbjct: 290 TPALPTIPQAPSGAPAKTPSVAPAAPSPRPL 320


>SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 21/114 (18%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
 Frame = -1

Query: 582 KSVKTQYFSENKNKNHSDE*PRLLSSTTHACISHDAYGETGSQTRESYSQTSTQVDEPFV 403
           +++ +   + ++N NH++      +S  H    ++ +    S    S   T+T    P  
Sbjct: 170 QNINSSNNNNDQNNNHNNNNNN--NSNNHNNHKNNNHNNNNSNNNNSNDHTATTTT-PTA 226

Query: 402 KGVVGWLLEG---TSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS 250
           K     +L      S+ +++DQ  D NN  +++ N+  +  +   H +  N  +
Sbjct: 227 KTTPATVLVQQNINSSNNNNDQNNDHNNNNNNNNNNYNNHNINHSHNNSNNNKN 280


>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
          Length = 1026

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 497  TPASPTMPMAKPAARPENPTAKPAPKWMNPL 405
            TPA PT+P A   A  + P+  PA     PL
Sbjct: 966  TPALPTIPQAPSGAPAKTPSVAPAAPSPRPL 996


>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
          Length = 1774

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = -1

Query: 405  VKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHH--RHGGNTSS*LGSPI 232
            VKG++    EG  ++ S  ++     T+   RN     + R     + GG+       P 
Sbjct: 781  VKGILTATKEGDGDRQSSSRSTQPE-TKRGRRNKDARKETRSDKSGKKGGDAGDDPSDPD 839

Query: 231  GSSQGAEDDSRRRPHNSK 178
                 +E+D  R+ HN K
Sbjct: 840  EEKDESEEDQERKRHNKK 857


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,512,000
Number of Sequences: 59808
Number of extensions: 665063
Number of successful extensions: 2218
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2171
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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