BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O23 (849 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.) 241 4e-64 SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17 SB_5574| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39 SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68 SB_34973| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89 SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 31 0.89 SB_912| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89 SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2 SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 31 1.6 SB_34751| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6 SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 30 2.1 SB_38055| Best HMM Match : zf-CW (HMM E-Value=1.9) 30 2.7 SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6 SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6 SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 29 3.6 SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 29 3.6 SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6 SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 29 3.6 SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8 SB_38025| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8 SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) 29 4.8 SB_35983| Best HMM Match : Ice_nucleation (HMM E-Value=0.42) 29 4.8 SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013) 29 4.8 SB_20744| Best HMM Match : CH (HMM E-Value=0.92) 29 4.8 SB_4395| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8 SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3 SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8) 29 6.3 SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3 SB_59186| Best HMM Match : rve (HMM E-Value=0.00029) 28 8.3 SB_8467| Best HMM Match : rve (HMM E-Value=2.4e-13) 28 8.3 SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3 SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 28 8.3 SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 28 8.3 >SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 156 Score = 241 bits (591), Expect = 4e-64 Identities = 123/149 (82%), Positives = 134/149 (89%) Frame = +1 Query: 154 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 333 + P Y FFGVMGA +A++FSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII Sbjct: 5 DQPSYVAFFGVMGATAAMVFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 64 Query: 334 AIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQ 513 AIYGLVVAVLI ++ + +Y LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTAQ Sbjct: 65 AIYGLVVAVLIGSSISK--DYTLYKSFLDLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQ 122 Query: 514 QPRLFVGMILILIFAEVLGLYGLIVAIYL 600 QPRLFVGMILILIFAEVLGLYGLIVA+ L Sbjct: 123 QPRLFVGMILILIFAEVLGLYGLIVALIL 151 >SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1574 Score = 33.9 bits (74), Expect = 0.17 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = -3 Query: 637 REWCVF---RAFILCTGRWRR*VRKDPILQRK*E*ESFRRIT*AAEQYHARLHLP 482 R WCV+ R+ I CT RW R V P + + +S RR+ E + L+ P Sbjct: 931 RGWCVYHMGRSLIACTRRWMRKVACSPSKETRPHRQSSRRLASQQESQQSLLNAP 985 >SB_5574| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 388 Score = 32.7 bits (71), Expect = 0.39 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = -1 Query: 354 HDQTVDGNNTRHDDRNDRLHDQLRP---HHRHGGNTSS*LGSPIGSSQGAEDDSRRRPHN 184 HD T T D + +HD R + RHG ++ + + + + D +R PHN Sbjct: 304 HDTTRTARYTTRLDTDRTIHDTARHGPLYTRHGSIRTAQYTTRLDTDRSIHDTARYGPHN 363 Query: 183 SKEGS 169 +++GS Sbjct: 364 TRQGS 368 >SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 501 Score = 31.9 bits (69), Expect = 0.68 Identities = 20/52 (38%), Positives = 22/52 (42%) Frame = -1 Query: 360 DSHDQTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAEDD 205 DSHD DG + HDD D HD H G T S I S + DD Sbjct: 36 DSHDDIDDGTDD-HDDTGD--HDGTDDHDDTGDGTDSHADDDIDDSTDSHDD 84 >SB_34973| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 427 Score = 31.5 bits (68), Expect = 0.89 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 4/122 (3%) Frame = +1 Query: 40 LGHICLCKSSFVE*VCADSHHSF--WDL*ILPHLTNKMAENNPIYGPFFGVMGAASAIIF 213 L H+ L KS + C DS HSF W +L + N P+ P A S + Sbjct: 285 LNHLVLPKSRKKKISCVDSLHSFAQWQNVMLETIYTNQVLNFPLAEP------AVSGLYG 338 Query: 214 SALGAAYGTAKSGTGIAAMSVMRP--ELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEP 387 S + A T + G A S++ P + + ++ VM GI + L A + ++P Sbjct: 339 SGVAALGITEQLQKGQEASSIVHPSDHDLYQRLMDAVMEGIHKVESLSSASKKESSKEKP 398 Query: 388 AN 393 N Sbjct: 399 KN 400 >SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) Length = 1338 Score = 31.5 bits (68), Expect = 0.89 Identities = 19/67 (28%), Positives = 29/67 (43%) Frame = -1 Query: 378 EGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAEDDSR 199 E +++ HD D N+ R R + + H GN S+ GS I +S G + Sbjct: 840 EKHTSRPRHDSKSDKKNSDDKHRRHRRRREKKKQRHHSGNDST--GSDIPASPGIANSPA 897 Query: 198 RRPHNSK 178 RP S+ Sbjct: 898 SRPSPSR 904 >SB_912| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 116 Score = 31.5 bits (68), Expect = 0.89 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 424 GAGLAVGFSGLAAGFAIGIVG 486 GAG+ VGF LA G +G+VG Sbjct: 46 GAGMTVGFCNLACGICVGLVG 66 >SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3261 Score = 31.1 bits (67), Expect = 1.2 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 306 HSCRHGGYYCHLRSGRGCPDCWCPPGASQLPPLQRV 413 + CR+ G C + R P C CPPG QRV Sbjct: 2981 YKCRYQGEVC-VTDSRNVPRCVCPPGCPPAEVSQRV 3015 >SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) Length = 295 Score = 30.7 bits (66), Expect = 1.6 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = -2 Query: 545 IRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAP 423 ++I+P N + PR P + T P P P PT P P Sbjct: 205 VKILPGNGVVPTQAPRPPTTQTPPTKAPTDPPVPPTNPPVP 245 >SB_34751| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1143 Score = 30.7 bits (66), Expect = 1.6 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 471 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTV 340 G+ +T SYS S+QV +PF V +QD H+QT+ Sbjct: 713 GDVQKETTGSYSCNSSQVFDPFTLQCVNLPQPIKQHQDKHNQTL 756 Score = 29.9 bits (64), Expect = 2.7 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 471 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTV 340 G+ +T SYS S+QV +PF V +QD H+QT+ Sbjct: 44 GDVQKETTGSYSCNSSQVFDPFTLQCVNLPQLIKQHQDKHNQTL 87 >SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) Length = 1155 Score = 30.3 bits (65), Expect = 2.1 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 Query: 497 TPASPTMPMAKPAARPENPTAKPAPKWMNPL 405 TPA PT+PMA A + P+ PA PL Sbjct: 1095 TPALPTIPMAPSGAPAKTPSVAPAAPSPRPL 1125 >SB_38055| Best HMM Match : zf-CW (HMM E-Value=1.9) Length = 439 Score = 29.9 bits (64), Expect = 2.7 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Frame = -3 Query: 505 YHARLHLPRCLWRNRQPDQRILQPNQHPSG*TLCKGGSWLAPGGHQQSGQ--PRPDRRW 335 YHA+ + +C ++P +L Q S C PGGHQ Q R RW Sbjct: 264 YHAKNQVVKCYQPGKEPGGHLLPTYQAKSQAVKCYYIPGKEPGGHQAKNQAVTRQRTRW 322 >SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1199 Score = 29.5 bits (63), Expect = 3.6 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -1 Query: 324 RHDDR-NDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAEDDSRRRPHNSKEGS 169 +H DR ND + H RHG T S SP G S+ ++D + S+E S Sbjct: 175 QHVDRENDMELSSRKTHGRHGERTESRFHSP-GRSKSSDDPAEPAKDQSRETS 226 >SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3592 Score = 29.5 bits (63), Expect = 3.6 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -3 Query: 490 HLPRCLWRNRQPDQRILQPNQHPSG*TLCKGGSWLAPG-GHQQSGQ 356 ++ +++ Q +Q +L NQ PS T+ GGS G GH GQ Sbjct: 2347 YVSHTVFKREQDEQLLLWLNQRPSDWTMTWGGSGTIYGWGHNHRGQ 2392 >SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) Length = 156 Score = 29.5 bits (63), Expect = 3.6 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -2 Query: 494 PASPTMPMAKPAARPENPTAKPAPK 420 PA+P P A PAA P PTA PA + Sbjct: 52 PAAPVTPTAAPAA-PVTPTAAPAAR 75 Score = 28.3 bits (60), Expect = 8.3 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = -2 Query: 494 PASPTMPMAKPAARPENPTAKPA 426 PA+P P A PAAR PTA PA Sbjct: 62 PAAPVTPTAAPAAR-VTPTAAPA 83 >SB_51968| Best HMM Match : PT (HMM E-Value=0.54) Length = 514 Score = 29.5 bits (63), Expect = 3.6 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = -2 Query: 572 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 405 +P T+ K R PT +L + +PT AKP PT +P K PL Sbjct: 135 KPKTTVKRRPTERPTKSLLPEEEEKERQTPTPTKAKPTTIKRRPTERPTKKPTKPL 190 >SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 979 Score = 29.5 bits (63), Expect = 3.6 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 306 HSCRHGGYYCHLRSGRGCPDCW 371 +SC G YYC++ RG DCW Sbjct: 348 YSCNSGHYYCYV---RGSNDCW 366 >SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) Length = 404 Score = 29.5 bits (63), Expect = 3.6 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -2 Query: 494 PASPTMPMAKPAARPENPTAKPAPK 420 PA+P P A PAA P PTA PA + Sbjct: 209 PAAPVTPTAAPAA-PVTPTAAPAAR 232 Score = 28.3 bits (60), Expect = 8.3 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = -2 Query: 494 PASPTMPMAKPAARPENPTAKPA 426 PA+P P A PAAR PTA PA Sbjct: 219 PAAPVTPTAAPAAR-VTPTAAPA 240 >SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 824 Score = 29.1 bits (62), Expect = 4.8 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 7/121 (5%) Frame = -1 Query: 516 LLSSTTHACISHDAY---GETGSQTRESYSQTSTQVDEPFVKGVVG--WLLEGTSNQDSH 352 L + TH HD + T TR T ++ G L T+ D+H Sbjct: 495 LYDTHTHETTRHDTHLHDMHTHETTRHDTHLHDTTENDTHPHDTTGNDTYLHDTTENDTH 554 Query: 351 DQTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAED--DSRRRPHNSK 178 GN+T+ +D ++ RPH G +T L G+ D ++ +PH++ Sbjct: 555 PHDTTGNDTQ---LHDTTGNKTRPHDTTGNDTH--LHDTTGNDTRPHDTTENDTQPHDTT 609 Query: 177 E 175 E Sbjct: 610 E 610 >SB_38025| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 870 Score = 29.1 bits (62), Expect = 4.8 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Frame = +2 Query: 11 MTHSVESCKAWAIFVCAKVVSWSECVQIVITAFGTCK--YSHI*QTKWLKIIQSTDPSLE 184 ++ +V C+ + CA V SW + + I++ A G C+ + I + L + ++ Sbjct: 22 LSSAVHGCRTARVIDCASVPSWPDGLSIIL-ARGKCRIALASIQAGRGLYSREKKTLVMK 80 Query: 185 LWGRR 199 +WG+R Sbjct: 81 IWGKR 85 >SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) Length = 233 Score = 29.1 bits (62), Expect = 4.8 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -2 Query: 533 PTNNLGC*AVPRTPASP--TMPMAKPAARPENPTAKPAP 423 P+NN G A P TPA+P M +A P+ T P P Sbjct: 87 PSNNFGTPATPATPATPAHNMGVAGPSGMATPGTFIPPP 125 >SB_35983| Best HMM Match : Ice_nucleation (HMM E-Value=0.42) Length = 216 Score = 29.1 bits (62), Expect = 4.8 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%) Frame = -1 Query: 354 HDQTVDGNNTRHDDRNDRLHDQLR--PHH-RHGGNTSS*LGSPIGSSQGAEDDSRRRPHN 184 HD ++T D HD R PH+ RHG ++ + + + + D +R P Sbjct: 65 HDTNSTIHDTARQGPRDTRHDTARYGPHNTRHGSTRTALYTTRLDTDRTIHDKARHGPLG 124 Query: 183 SKEGSV 166 ++ GS+ Sbjct: 125 TRHGSI 130 >SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013) Length = 611 Score = 29.1 bits (62), Expect = 4.8 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 4/122 (3%) Frame = +1 Query: 40 LGHICLCKSSFVE*VCADSHHSF--WDL*ILPHLTNKMAENNPIYGPFFGVMGAASAIIF 213 L H+ L +S + C DS HSF W +L + N P+ P A S + Sbjct: 469 LNHLVLPESREKKISCVDSLHSFAQWQNVMLETIYTNQVLNFPLAEP------AVSGLYG 522 Query: 214 SALGAAYGTAKSGTGIAAMSVMRP--ELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEP 387 S + A T + G A S++ P + + + VM GI + L A + ++P Sbjct: 523 SGVAALGITEQLQKGQKASSIVHPLDHDLYQRLRDAVMEGICKVESLSSASKKESSKEKP 582 Query: 388 AN 393 N Sbjct: 583 KN 584 >SB_20744| Best HMM Match : CH (HMM E-Value=0.92) Length = 1103 Score = 29.1 bits (62), Expect = 4.8 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -1 Query: 348 QTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAEDD 205 +T+ + RN RPH +HGG T S G P+ +S + D Sbjct: 569 RTLSATGCSYQSRNIPSFSTSRPHDKHGGQTYS-SGLPVSNSIHQDKD 615 >SB_4395| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 74 Score = 29.1 bits (62), Expect = 4.8 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -1 Query: 669 IMSIEARSTGDGSGVCSGRLFCVQVDGDDKSVKTQYFSENKNKN 538 + ++ +STGD S VC G +F D K + Q E K N Sbjct: 15 LSALNKKSTGDKSWVCFGNMFMKLPDSKTKDMIIQGLQEVKGFN 58 >SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1870 Score = 28.7 bits (61), Expect = 6.3 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%) Frame = -2 Query: 506 VPRTPAS-PTMPMAKPAARPENPTAKPAPKWMNP 408 +P TP P P P RP PT +P P P Sbjct: 1354 IPSTPRPRPPTPPRPPTPRPRPPTPRPGPPTPRP 1387 >SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8) Length = 355 Score = 28.7 bits (61), Expect = 6.3 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = -2 Query: 530 TNNLGC*AVPRTPASPTMPMAKPA--ARPENPTAKPAPKWMNPL*RG*LAGSWRAPAIRT 357 +NN G A P TPA+ +P+A P+ A P T PAP + P A + ++ Sbjct: 220 SNNFGTPATPATPAN-GVPIAGPSGMATPGAFTPPPAPVFTPPPPYRTTAKPFPKMSLTP 278 Query: 356 ATTRP*MAIIPAMTTGMIDFMISS 285 +P + P +T ++ ++ S Sbjct: 279 TPKKPPVPKKPVLTPAQLEGLLKS 302 >SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 705 Score = 28.7 bits (61), Expect = 6.3 Identities = 15/73 (20%), Positives = 31/73 (42%) Frame = -1 Query: 381 LEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS*LGSPIGSSQGAEDDS 202 + +N D++ D NN + D N+ ++ ++ + N S S S ++++S Sbjct: 581 INNANNNDNNSDNNDNNNDNNSDNNNNNNNNNNNNNNNNDNNSD-NNSDNNSDNNSDNNS 639 Query: 201 RRRPHNSKEGSVD 163 N+ E D Sbjct: 640 DNNNDNNSERGAD 652 >SB_59186| Best HMM Match : rve (HMM E-Value=0.00029) Length = 346 Score = 28.3 bits (60), Expect = 8.3 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -2 Query: 497 TPASPTMPMAKPAARPENPTAKPAPKWMNPL 405 TPA PT+P A A + P+ PA PL Sbjct: 286 TPALPTIPQAPSGAPAKTPSVAPAAPSPRPL 316 >SB_8467| Best HMM Match : rve (HMM E-Value=2.4e-13) Length = 347 Score = 28.3 bits (60), Expect = 8.3 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -2 Query: 497 TPASPTMPMAKPAARPENPTAKPAPKWMNPL 405 TPA PT+P A A + P+ PA PL Sbjct: 290 TPALPTIPQAPSGAPAKTPSVAPAAPSPRPL 320 >SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 290 Score = 28.3 bits (60), Expect = 8.3 Identities = 21/114 (18%), Positives = 48/114 (42%), Gaps = 3/114 (2%) Frame = -1 Query: 582 KSVKTQYFSENKNKNHSDE*PRLLSSTTHACISHDAYGETGSQTRESYSQTSTQVDEPFV 403 +++ + + ++N NH++ +S H ++ + S S T+T P Sbjct: 170 QNINSSNNNNDQNNNHNNNNNN--NSNNHNNHKNNNHNNNNSNNNNSNDHTATTTT-PTA 226 Query: 402 KGVVGWLLEG---TSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHRHGGNTSS 250 K +L S+ +++DQ D NN +++ N+ + + H + N + Sbjct: 227 KTTPATVLVQQNINSSNNNNDQNNDHNNNNNNNNNNYNNHNINHSHNNSNNNKN 280 >SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) Length = 1026 Score = 28.3 bits (60), Expect = 8.3 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -2 Query: 497 TPASPTMPMAKPAARPENPTAKPAPKWMNPL 405 TPA PT+P A A + P+ PA PL Sbjct: 966 TPALPTIPQAPSGAPAKTPSVAPAAPSPRPL 996 >SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) Length = 1774 Score = 28.3 bits (60), Expect = 8.3 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Frame = -1 Query: 405 VKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHH--RHGGNTSS*LGSPI 232 VKG++ EG ++ S ++ T+ RN + R + GG+ P Sbjct: 781 VKGILTATKEGDGDRQSSSRSTQPE-TKRGRRNKDARKETRSDKSGKKGGDAGDDPSDPD 839 Query: 231 GSSQGAEDDSRRRPHNSK 178 +E+D R+ HN K Sbjct: 840 EEKDESEEDQERKRHNKK 857 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,512,000 Number of Sequences: 59808 Number of extensions: 665063 Number of successful extensions: 2218 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 1789 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2171 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2407378809 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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