Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O22
(892 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15403| Best HMM Match : CH (HMM E-Value=0) 35 0.077
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 35 0.10
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 34 0.18
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 33 0.41
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.41
SB_4593| Best HMM Match : Ion_trans (HMM E-Value=2.9e-40) 32 0.72
SB_3798| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 0.95
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 1.7
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 2.2
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 2.2
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 30 2.2
SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_27078| Best HMM Match : Kazal_2 (HMM E-Value=7.6e-07) 29 3.8
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_20126| Best HMM Match : TSP_1 (HMM E-Value=0.0041) 29 5.1
SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 29 6.7
SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8) 29 6.7
SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11) 29 6.7
SB_12223| Best HMM Match : ShTK (HMM E-Value=1.8e-09) 29 6.7
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 28 8.8
SB_5648| Best HMM Match : rve (HMM E-Value=6.1e-13) 28 8.8
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 35.1 bits (77), Expect = 0.077
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 464 ASCRXV-SAVCGSDGQTXRSLCKLRRXACRXPXKHLVVH 577
A+C V S VCG+DG T +LC+LR +CR V+H
Sbjct: 1311 AACPLVKSRVCGTDGITYDNLCRLRAESCRRYQPVNVLH 1349
Score = 32.3 bits (70), Expect = 0.54
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 461 AASCRXVSAVCGSDGQTXRSLCKLRRXACR 550
AA R + VCGSDG T +LC L C+
Sbjct: 726 AACTREYAPVCGSDGNTYNNLCLLTAARCQ 755
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 34.7 bits (76), Expect = 0.10
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXACRXPXKHLVVHXHGTLXKXXXDGVRL-RWRQXVXSXXXSLG 664
+CGSDG + S C +R AC+ +++ V HG + +R R+ + + +
Sbjct: 1621 ICGSDGVSYLSACAMRATACQ-QNRNITVAHHGACERVSCGNIRCPRFSMCISAQEGGIK 1679
Query: 665 CPLXTXC 685
C C
Sbjct: 1680 CSCPIYC 1686
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 473 RXVSAVCGSDGQTXRSLCKLRRXACR 550
+ S VCGSDG+T + CKLR +C+
Sbjct: 515 KEASPVCGSDGKTYENECKLRVESCK 540
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXACRXPXKHLVV 574
VCGSDG++ S C+LR+ AC K +V
Sbjct: 1693 VCGSDGKSYGSECELRKEACEAKIKLTLV 1721
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCG DG T ++LC L R AC
Sbjct: 590 VCGDDGVTYQNLCHLLREAC 609
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 470 CRXV--SAVCGSDGQTXRSLCKLRRXAC 547
CR + + VCG DG++ S C L+R AC
Sbjct: 1756 CRTLKYTPVCGDDGKSYLSTCMLKRLAC 1783
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 485 AVCGSDGQTXRSLCKLRRXACR 550
AVC SD +T +S C +R ACR
Sbjct: 1229 AVCASDMKTYQSECHMRVEACR 1250
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 479 VSAVCGSDGQTXRSLCKLRRXACRXPXK 562
+ VCGSDG+ RS C L +C K
Sbjct: 1298 IEPVCGSDGKDYRSRCFLEVTSCALKIK 1325
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 485 AVCGSDGQTXRSLCKLRRXACRXPXKHLVVHXHG 586
AVCGS+G+T + C LR +C+ K +VV G
Sbjct: 1901 AVCGSNGRTYINDCLLRSDSCKL-RKTIVVLQKG 1933
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 34.3 bits (75), Expect = 0.13
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCG+DG+T R+LC++R+ +C
Sbjct: 4248 VCGADGKTYRNLCEIRKASC 4267
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXACRXPXKHLVVHXHG 586
VCGSDG+T ++ C+L+R AC K++ V G
Sbjct: 3981 VCGSDGKTYKNECELKRAACE-SKKNVTVASQG 4012
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 467 SC-RXVSAVCGSDGQTXRSLCKLRRXACR 550
SC + VCGSDG+ ++CKLR+ AC+
Sbjct: 276 SCPNMLDPVCGSDGKNYDNVCKLRQNACK 304
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 467 SCRXV-SAVCGSDGQTXRSLCKLRRXACR 550
SC + VCGSDG+ + C LR+ AC+
Sbjct: 113 SCPNILDPVCGSDGKNYDNECNLRQNACK 141
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 467 SCRXVSA-VCGSDGQTXRSLCKLRRXACR 550
SC ++ VCGSDG+T + C+LR+ AC+
Sbjct: 5623 SCPSINKPVCGSDGKTYNNECELRQYACK 5651
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 467 SCRXV-SAVCGSDGQTXRSLCKLRRXACR 550
SC + VCGSDG+ + C LR+ AC+
Sbjct: 5792 SCPNILDPVCGSDGKNYDNECNLRQNACK 5820
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 482 SAVCGSDGQTXRSLCKLRRXAC 547
S +CGSDG+T + C++ R +C
Sbjct: 5163 SPLCGSDGKTYDNQCEMERASC 5184
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 32.7 bits (71), Expect = 0.41
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 479 VSAVCGSDGQTXRSLCKLRRXACRXPXKHLVVHXHGT 589
+ VCG++GQT +LC ++ CR +H HG+
Sbjct: 223 IDQVCGTNGQTFDNLCLFKKHVCRIKGNFSYLH-HGS 258
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 32.7 bits (71), Expect = 0.41
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 479 VSAVCGSDGQTXRSLCKLRRXAC 547
+S VCGSDG+ + C+LR+ AC
Sbjct: 1763 ISPVCGSDGKIYKDDCELRKTAC 1785
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCG+DG+T + C++R AC
Sbjct: 1306 VCGTDGKTYGNKCEMRASAC 1325
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 482 SAVCGSDGQTXRSLCKLRRXACR 550
S VCGSDG + C +R AC+
Sbjct: 1376 SPVCGSDGNMYSNECAMRAAACK 1398
>SB_4593| Best HMM Match : Ion_trans (HMM E-Value=2.9e-40)
Length = 1120
Score = 31.9 bits (69), Expect = 0.72
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 633 CLHRKRTPSXXXLXKVPWXCTTKCLXGXRQACRRNLHSERXVCPSL-PHTALTXRHDAAQ 457
CLHR R + V CT CL R R ++ S R VC ++ H R+ +
Sbjct: 824 CLHRIRNKRRLSVISVRHVCTAVCLHRIRNKRRLSVISVRHVCTAVCLHRIRNKRYLSVN 883
Query: 456 THLA 445
T LA
Sbjct: 884 TCLA 887
>SB_3798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 31.5 bits (68), Expect = 0.95
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXACRXPXKHLVVH 577
+CG+DG+T S C LR +C + + H
Sbjct: 232 ICGTDGRTYSSFCALREHSCNVGRLYSIKH 261
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXACR 550
VCG+DG T SLC+LR C+
Sbjct: 143 VCGADGVTYGSLCRLRVATCK 163
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 31.5 bits (68), Expect = 0.95
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 479 VSAVCGSDGQTXRSLCKLRRXAC 547
V VCG+DG T +LC LR AC
Sbjct: 606 VKPVCGTDGVTYDNLCSLRLKAC 628
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXACR 550
VCGSDG+T + C +R +C+
Sbjct: 1079 VCGSDGKTYNNECLMRAASCK 1099
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 467 SCRXVSA-VCGSDGQTXRSLCKLRRXACR 550
SC ++ VCGSDG S C L++ AC+
Sbjct: 287 SCPLINIPVCGSDGAQYDSECALQQQACQ 315
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCGSD T S C+LRR AC
Sbjct: 229 VCGSDNVTYASECQLRRAAC 248
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 473 RXVSAVCGSDGQTXRSLCKLRRXAC 547
+ V VCGSDG+T + C LR AC
Sbjct: 1655 KIVKQVCGSDGKTYDNECVLRMAAC 1679
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VC SDG T S+C++ R AC
Sbjct: 3015 VCASDGLTYPSVCEMHRTAC 3034
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCGSD +T + C++R+ AC
Sbjct: 619 VCGSDSKTYPNECRMRQEAC 638
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXACRXPXKHLVVHXHG 586
VCG+DG+ + C LRR ACR + VH G
Sbjct: 744 VCGTDGREYLNRCFLRRNACRTQTS-IKVHKWG 775
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 482 SAVCGSDGQTXRSLCKLRRXACRXPXKHLVVH 577
S VCG DG+T S C + AC+ V H
Sbjct: 812 SPVCGQDGRTYSSTCAMDARACQAQTSIAVKH 843
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 479 VSAVCGSDGQTXRSLCKLRRXAC 547
+ VCGSDG T + C+L R AC
Sbjct: 89 IKPVCGSDGVTYPNHCELHRIAC 111
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 479 VSAVCGSDGQTXRSLCKLRRXACRXPXKHLVVHXHGT 589
V VC ++G+T +LC+L++ C H HG+
Sbjct: 334 VDQVCATNGETFDNLCRLKKHVCHIKGNFTFYH-HGS 369
>SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 352
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCGSDG T RS C LR C
Sbjct: 306 VCGSDGVTYRSKCHLRVAKC 325
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXACRXP 556
VCGSDG+T + C+L C P
Sbjct: 247 VCGSDGKTYTNGCELATAKCALP 269
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 464 ASCRXVSAVCGSDGQTXRSLCKLRRXACR 550
A R + VCG+D +T ++C L R AC+
Sbjct: 121 ACTRELMPVCGTDQKTYDNMCLLERAACK 149
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXACR 550
VCGSD +T +LC L AC+
Sbjct: 207 VCGSDNKTYANLCNLEVEACK 227
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 464 ASCRXVSAVCGSDGQTXRSLCKLRRXACR 550
A R + VCGSDG+T + C L +C+
Sbjct: 45 ACTREYAPVCGSDGKTYPNPCALEVESCK 73
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 479 VSAVCGSDGQTXRSLCKLRRXACRXPXKHLVVHXHGT 589
V VC ++G+T +LC+L++ C H HG+
Sbjct: 68 VDQVCATNGETFDNLCRLKKHVCHIKGNFTFYH-HGS 103
>SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 269 ECCTGASRSPAAXSPKDYDSGEIFFYKVLSGGVPCNACAES 391
+ C R+PA P Y + FY+ SG CNAC ++
Sbjct: 65 QSCAKPHRTPAHTHPLYYVNSSEVFYQSTSGVWRCNACLKT 105
>SB_27078| Best HMM Match : Kazal_2 (HMM E-Value=7.6e-07)
Length = 54
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCG+DG S CKLR AC
Sbjct: 14 VCGTDGNDYPSRCKLRYQAC 33
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +2
Query: 350 VLSGGVPCNACAE-SCAGMSXXXXXXXXXXXXXXXXXXAASCRXVSAVCGSDGQTXRSLC 526
V S G+ + C+E +C+ + + +C SDG T S C
Sbjct: 15 VSSSGIKQDPCSEKTCSNQGEECVINSFGMAECRCTSTCSPAQPSDRLCASDGITYNSKC 74
Query: 527 KLRRXAC 547
+L + AC
Sbjct: 75 ELNKTAC 81
>SB_20126| Best HMM Match : TSP_1 (HMM E-Value=0.0041)
Length = 448
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 426 QRRPAPQDIPAHDSAQALHGTPPE 355
+R PAP DIPA + G PPE
Sbjct: 48 RRLPAPNDIPAFQAGNPFLGYPPE 71
>SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)
Length = 1724
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 464 ASCRXVSAVCGSDGQTXRSLCKLRRXACRXPXKHLVVHXHGT 589
A R + VCGSDG+T + C ++ AC K + V GT
Sbjct: 50 ACTREYAPVCGSDGKTYPTECVMQVDAC-SKNKDIKVAFKGT 90
>SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8)
Length = 551
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -2
Query: 549 RQACRRNLHSERXVCPSLPHTALTXRHDAAQTHLARPPLTTQ 424
R C LH R C PH A T +THLAR T Q
Sbjct: 162 RTPCEHRLHLARIPCEHRPHLAKTPWEH--RTHLARTSNTYQ 201
>SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11)
Length = 502
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 461 AASCRXVSAVCGSDGQTXRSLCKLRRXAC 547
A C VC DG +LCK+R+ AC
Sbjct: 409 AMECPEGVPVCADDGLIYGNLCKMRQSAC 437
>SB_12223| Best HMM Match : ShTK (HMM E-Value=1.8e-09)
Length = 542
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -2
Query: 633 CLHRKRTPSXXXLXKVPWXCTTKCLXGXRQACRRNLHSERXVCPSLPHTAL 481
CLH P VP C R C NLH+ PS+P L
Sbjct: 33 CLHNLHNPDTRH-PSVPGNTLVNCDYAIRLVCLHNLHNPDTRHPSIPGNTL 82
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -2
Query: 633 CLHRKRTPSXXXLXKVPWXCTTKCLXGXRQACRRNLHSERXVCPSLPHTAL 481
CLH P VP C R C NLH+ PS+P L
Sbjct: 153 CLHNLHNPDTHH-PSVPGNTLVNCDYAIRLVCLHNLHNPDTRHPSIPGNTL 202
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -2
Query: 633 CLHRKRTPSXXXLXKVPWXCTTKCLXGXRQACRRNLHSERXVCPSLPHTAL 481
CLH P VP C R C NLH+ PS+P L
Sbjct: 213 CLHNLHNPDTRH-PSVPGNTLVNCDYAIRLVCLHNLHNPDTRHPSIPGNTL 262
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -2
Query: 633 CLHRKRTPSXXXLXKVPWXCTTKCLXGXRQACRRNLHSERXVCPSLPHTAL 481
CLH P VP C R C NLH+ PS+P L
Sbjct: 303 CLHNLHNPDTHH-PSVPGNTLVNCDYAIRLVCLHNLHNPDTRHPSIPGNTL 352
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = -2
Query: 633 CLHRKRTPSXXXLXKVPWXCTTKCLXGXRQACRRNLHSERXVCPSLPHTAL 481
CLH P +P C R C NLH+ PS+P L
Sbjct: 63 CLHNLHNPDTRH-PSIPGNTLVNCDYAIRLVCLHNLHNPDTRHPSIPGNTL 112
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 479 VSAVCGSDGQTXRSLCKLRRXACRXPXKHLVVHXHG 586
V VC ++G+T +LC L++ C H HG
Sbjct: 111 VDQVCATNGETFDNLCLLKKHVCHIKGNFTFYH-HG 145
>SB_5648| Best HMM Match : rve (HMM E-Value=6.1e-13)
Length = 1606
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 494 RTPRSLCGTTPRKHTWRDRLSPRNGVRRRK 405
RT R G P+ WR PR+ +RR++
Sbjct: 841 RTQRPTAGLRPQGRRWRPHSRPRSALRRQR 870
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,349,783
Number of Sequences: 59808
Number of extensions: 384952
Number of successful extensions: 1104
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2550281014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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