Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O22
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 33 0.36
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 32 0.63
AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical ... 32 0.63
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 5.9
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 5.9
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 5.9
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81557-5|CAB04533.1| 345|Caenorhabditis elegans Hypothetical pr... 28 7.8
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 28 7.8
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 28 7.8
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXACR 550
VCGSDG T +LC+L+ AC+
Sbjct: 819 VCGSDGTTYSNLCELKMFACK 839
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCGSDG+T + C+L+ AC
Sbjct: 483 VCGSDGKTYSNECRLQNAAC 502
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCG+DG T S C +++ AC
Sbjct: 559 VCGTDGVTYSSECHMKKSAC 578
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 31.9 bits (69), Expect = 0.63
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCGSDG T +LC+L+ AC
Sbjct: 880 VCGSDGTTYSNLCELKMFAC 899
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCGSDG+T + C+L+ AC
Sbjct: 475 VCGSDGKTYSNECRLQNAAC 494
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 488 VCGSDGQTXRSLCKLRRXAC 547
VCG+DG T S C +++ AC
Sbjct: 551 VCGTDGVTYSSECHMKKSAC 570
>AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical
protein Y64G10A.1 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = -2
Query: 591 KVPWXCTTKCLXGXRQ-ACRRNLHSERXVCPSLPHTALTXRHDAAQTHLARPPLTTQR 421
K+ W T KCL G AC + CP P TA + A + P T Q+
Sbjct: 134 KIEWNRTRKCLSGGYNCACVGESEQTKFECPCTPMTAFPTGNTACSGLTKKVPYTIQK 191
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 417 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 325
P P P HD A GTPP R + + PL
Sbjct: 562 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 592
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 417 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 325
P P P HD A GTPP R + + PL
Sbjct: 853 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 883
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 417 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 325
P P P HD A GTPP R + + PL
Sbjct: 868 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 898
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 417 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 325
P P P HD A GTPP R + + PL
Sbjct: 868 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 898
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 417 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 325
P P P HD A GTPP R + + PL
Sbjct: 562 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 592
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 417 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 325
P P P HD A GTPP R + + PL
Sbjct: 853 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 883
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 417 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 325
P P P HD A GTPP R + + PL
Sbjct: 868 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 898
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 417 PAPQDIPAHDSAQALHGTPPERTL*KNISPL 325
P P P HD A GTPP R + + PL
Sbjct: 868 PPPPIPPTHDEMMAPRGTPPSRRSSETMVPL 898
>Z81557-5|CAB04533.1| 345|Caenorhabditis elegans Hypothetical
protein F59A1.10 protein.
Length = 345
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 443 DRLSPRNGVRRRKTFRHMILHKHYTVLLP 357
DR SPR G R FR++ LHK + P
Sbjct: 71 DRESPRRGGYRDNWFRNLSLHKWFAEYFP 99
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -2
Query: 573 TTKCLXGXRQACRRNLHSERXVCPSLPHTALTXRHDAAQTHLARPPLTTQRRPAP 409
+T+C +Q+CR+ S V P + T + PP TT PAP
Sbjct: 77 STQCAPACQQSCRQQCQSAPAVSQCQPMCQQQCQSQC--TPMYNPPATTTTTPAP 129
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -2
Query: 573 TTKCLXGXRQACRRNLHSERXVCPSLPHTALTXRHDAAQTHLARPPLTTQRRPAP 409
+T+C +Q+CR+ S V P + T + PP TT PAP
Sbjct: 77 STQCAPACQQSCRQQCQSAPAVSQCQPMCQQQCQSQC--TPMYNPPATTTTTPAP 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,606,221
Number of Sequences: 27780
Number of extensions: 276687
Number of successful extensions: 684
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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