BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O21 (848 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_1319 + 26117353-26117784 29 4.7 07_03_0579 + 19649978-19650442 28 8.2 07_03_0568 - 19593265-19593729 28 8.2 07_01_0766 - 5885207-5885791,5885874-5886224,5886252-5886269,588... 28 8.2 03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 28 8.2 >08_02_1319 + 26117353-26117784 Length = 143 Score = 29.1 bits (62), Expect = 4.7 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +3 Query: 459 KGTSSRTATLPSRKEGALPSTCPSRQTRPRQGICARTL 572 +GTS L ++ + P TCP++ RP +RT+ Sbjct: 87 RGTSKPDKYLKAKSDSVRPRTCPAKSGRPPGASSSRTV 124 >07_03_0579 + 19649978-19650442 Length = 154 Score = 28.3 bits (60), Expect = 8.2 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = +3 Query: 474 RTATLPSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFM 596 R A + +G P+ P+ PR ++LPRLK + + Sbjct: 99 RVAVKDVKLQGPRPAPTPANMAAPRPTTAGKSLPRLKMQML 139 >07_03_0568 - 19593265-19593729 Length = 154 Score = 28.3 bits (60), Expect = 8.2 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = +3 Query: 474 RTATLPSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFM 596 R A + +G P+ P+ PR ++LPRLK + + Sbjct: 99 RVAVKDVKLQGPRPAPTPANMAAPRPTTAGKSLPRLKMQML 139 >07_01_0766 - 5885207-5885791,5885874-5886224,5886252-5886269, 5886339-5886541,5886632-5886890,5887052-5887264, 5887357-5887482,5887590-5887727,5887817-5888162, 5888254-5888520,5888983-5889172,5889264-5889363, 5889444-5889694,5889990-5890182,5890313-5890336 Length = 1087 Score = 28.3 bits (60), Expect = 8.2 Identities = 13/50 (26%), Positives = 22/50 (44%) Frame = +2 Query: 395 SARSPTLPRCQTCPLPS*RDCQGYQFTYRNPTQSKRRCLTQYMSQSTDPS 544 +A C C P R C Y++ ++ TQ+ +C T+Y P+ Sbjct: 29 TAEGDVFAACDVCGFPVCRPC--YEYERKDGTQACPQCKTKYKRHKGSPA 76 >03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886, 3099148-3099224,3099501-3099540,3099737-3099802, 3100305-3100706,3100777-3100888,3101445-3101530, 3101607-3101672 Length = 544 Score = 28.3 bits (60), Expect = 8.2 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = +3 Query: 552 GICARTLPRLKRKFMFQSKCTCPL--LTQXRKSTLPRX---RSRTCACSLPRIQR 701 G+ +R P K + Q+ C CP L Q KS L R TCAC++P Q+ Sbjct: 160 GMLSRVDPNRK---VTQAICICPTRELAQQNKSVLMRMGKFTGITCACAIPPAQK 211 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,279,717 Number of Sequences: 37544 Number of extensions: 322624 Number of successful extensions: 864 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 821 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 864 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2362209084 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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