Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O21
         (848 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    31   0.033
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    26   1.3  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            25   3.8  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.9  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 31.5 bits (68), Expect = 0.033
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 643 VXYPVKGPVHVPAPYPVYKEVXXTXKVHVDRPYPV 747
           V  PV   V VP P+PV   V    KV++ +PYP+
Sbjct: 166 VPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPL 200



 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 356 PYPVRKENPLPRESARSPTLPRCQTCPLP 442
           PYP+  E P P E  +   +P  +  P+P
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPVP 259



 Score = 23.4 bits (48), Expect = 8.9
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +1

Query: 625 LPSXEKVXYPVKGPVHVPAPYPVYKEVXXTXKVHVDRPYP 744
           +P    +  P    V++P PYP+   V    K+ + +  P
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIP 217


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 356 PYPVRKENPLPRESARSPTLPRCQTCPLP 442
           P   R E  + R +  SP L +  TCP+P
Sbjct: 37  PRTRRSEAVMTRSTPSSPRLAQASTCPVP 65


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 561 HIYLDGDGSVDWDMYWVRHLLFDWV 487
           +I+L  DGS+ W    VR LLF+ V
Sbjct: 78  NIFLKTDGSLLWKNKPVRELLFEGV 102


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 489 PSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFMFQS 605
           P+R+     ST P+   R R     + LPR +R F F S
Sbjct: 275 PARRRSR--STRPTSWPRSRPTSKPKRLPRRRRPFFFSS 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,182
Number of Sequences: 2352
Number of extensions: 10912
Number of successful extensions: 76
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)