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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O21
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical...    30   1.8  

>AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical
           protein F41E6.11 protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +1

Query: 625 LPSXEKVXYPVKGPVHVPAPYPVYKEVXXTXKVHVDRPYPVHFPTXAXPVXNP 783
           +P   +V  P++ PV VP P PVY+    T       P P   P  A P   P
Sbjct: 158 VPVPVQVPVPIRVPVPVPVPTPVYQ---PTYCAVPPCPAPAATPVYAQPAPRP 207



 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 670 HVPAPYPVYKEVXXTXKVHVDRPYPVHFPT 759
           HVP P PV   V     V V  P PV+ PT
Sbjct: 155 HVPVPVPVQVPVPIRVPVPVPVPTPVYQPT 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,793,907
Number of Sequences: 27780
Number of extensions: 247515
Number of successful extensions: 717
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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