BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O20 (833 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal prote... 354 4e-98 AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical... 33 0.33 Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 30 2.3 Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 30 2.3 AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 30 2.3 AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 30 2.3 AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 30 2.3 AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 29 3.1 Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 29 4.1 Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 29 4.1 U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 5.4 U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 29 5.4 U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 28 7.2 U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 28 7.2 Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 28 9.5 Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 28 9.5 Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 28 9.5 Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 28 9.5 Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 9.5 Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 9.5 Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 28 9.5 Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 28 9.5 AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical ... 28 9.5 >U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal protein, small subunitprotein 3 protein. Length = 247 Score = 354 bits (871), Expect = 4e-98 Identities = 173/244 (70%), Positives = 200/244 (81%), Gaps = 4/244 (1%) Frame = +3 Query: 27 MAVN-NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSV 203 MA N N++KK+K V G+FKAELN FL +ELAEDGYSGVEVR TP R+E+IIMATRTQ+V Sbjct: 1 MAANQNVTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNV 60 Query: 204 LGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRA 383 LGE+GRRI+ELTSVVQKRF E SVELYAEKV+ RGLCA+AQ ESLRYKL+GGLAVRRA Sbjct: 61 LGERGRRIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRA 120 Query: 384 CYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 563 CYGVLRFIMESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P NDY+ A RHV LR Sbjct: 121 CYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLR 180 Query: 564 QGVLGIKVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTS---EVRSXAPGPXP 734 QGV+GIKVKIMLP+D +G NGP+ PDH+ + EP++E +P EP S E + P Sbjct: 181 QGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQHKEEKKDVQVPAA 240 Query: 735 XPVA 746 PVA Sbjct: 241 QPVA 244 >AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical protein F25E5.1 protein. Length = 1062 Score = 32.7 bits (71), Expect = 0.33 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +3 Query: 621 NGPKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXPVAAXR 755 NGPKK + +L+T P E V E + +P P P +A R Sbjct: 998 NGPKKSKNQMMLITFPSREIVEEEEPPQEAEQSPSPDPEKIAKRR 1042 >Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical protein C05C10.2b protein. Length = 1553 Score = 29.9 bits (64), Expect = 2.3 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +3 Query: 18 VAIMAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGY 131 +A +I KK F GDG F E E+ +DGY Sbjct: 885 IAARLSRDIPKKFSFKGDGEFFVSQREVFENEILDDGY 922 >Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical protein C05C10.2a protein. Length = 1551 Score = 29.9 bits (64), Expect = 2.3 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +3 Query: 18 VAIMAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGY 131 +A +I KK F GDG F E E+ +DGY Sbjct: 885 IAARLSRDIPKKFSFKGDGEFFVSQREVFENEILDDGY 922 >AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and belle-like helicase protein1, isoform c protein. Length = 660 Score = 29.9 bits (64), Expect = 2.3 Identities = 17/41 (41%), Positives = 18/41 (43%) Frame = -2 Query: 745 ATGXGXGPGAXERTSLVGSRGTGSSLGSVTRMWSGCGFFGP 623 A G G GA R G G SSL S + G GF GP Sbjct: 584 AYGGSFGGGAPRRPFTNGGFGAHSSLSSTSNSGGGGGFSGP 624 >AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and belle-like helicase protein1, isoform b protein. Length = 644 Score = 29.9 bits (64), Expect = 2.3 Identities = 17/41 (41%), Positives = 18/41 (43%) Frame = -2 Query: 745 ATGXGXGPGAXERTSLVGSRGTGSSLGSVTRMWSGCGFFGP 623 A G G GA R G G SSL S + G GF GP Sbjct: 568 AYGGSFGGGAPRRPFTNGGFGAHSSLSSTSNSGGGGGFSGP 608 >AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and belle-like helicase protein1, isoform a protein. Length = 641 Score = 29.9 bits (64), Expect = 2.3 Identities = 17/41 (41%), Positives = 18/41 (43%) Frame = -2 Query: 745 ATGXGXGPGAXERTSLVGSRGTGSSLGSVTRMWSGCGFFGP 623 A G G GA R G G SSL S + G GF GP Sbjct: 565 AYGGSFGGGAPRRPFTNGGFGAHSSLSSTSNSGGGGGFSGP 605 >AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical protein Y18D10A.1 protein. Length = 1634 Score = 29.5 bits (63), Expect = 3.1 Identities = 13/40 (32%), Positives = 25/40 (62%) Frame = +3 Query: 192 TQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATR 311 + S+ G+KG+ +REL + + K ++ E++ + AE A R Sbjct: 396 SSSIHGKKGKTVRELQTEMMKGESVKEKAARMRAEASAGR 435 >Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical protein M88.5b protein. Length = 704 Score = 29.1 bits (62), Expect = 4.1 Identities = 14/54 (25%), Positives = 25/54 (46%) Frame = +3 Query: 114 LAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 275 L G G + IR+E+ + ++G+ G+ +REL + IPE+ Sbjct: 543 LPSSGMDGDRSHMLRIRTEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPEE 596 >Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical protein M88.5a protein. Length = 828 Score = 29.1 bits (62), Expect = 4.1 Identities = 14/54 (25%), Positives = 25/54 (46%) Frame = +3 Query: 114 LAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 275 L G G + IR+E+ + ++G+ G+ +REL + IPE+ Sbjct: 667 LPSSGMDGDRSHMLRIRTEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPEE 720 >U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein B0496.3a protein. Length = 1551 Score = 28.7 bits (61), Expect = 5.4 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -2 Query: 679 GSSLGSVTRMWSGCGFFGPXLPCWSHGNMILTLI 578 GS L + + +G + GP + CWS G ++ TL+ Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267 >U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein B0496.3b protein. Length = 1592 Score = 28.7 bits (61), Expect = 5.4 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -2 Query: 679 GSSLGSVTRMWSGCGFFGPXLPCWSHGNMILTLI 578 GS L + + +G + GP + CWS G ++ TL+ Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267 >U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein F57F4.4 protein. Length = 2090 Score = 28.3 bits (60), Expect = 7.2 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = +2 Query: 533 QHCYQTCASQARSTRNQGQNHVA 601 Q CY CAS ST Q QNH A Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821 >U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) interacting proteinprotein 1 protein. Length = 2153 Score = 28.3 bits (60), Expect = 7.2 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = +2 Query: 533 QHCYQTCASQARSTRNQGQNHVA 601 Q CY CAS ST Q QNH A Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821 >Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical protein Y57G11A.2 protein. Length = 640 Score = 27.9 bits (59), Expect = 9.5 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +3 Query: 657 VTEPKDEPVPLEPTSEVRSXAPGPXPXP 740 V EP +EP P SE+ S P P P P Sbjct: 547 VPEPTEEP-PTPTDSEIDSPTPAPAPGP 573 >Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical protein Y57G11A.2 protein. Length = 640 Score = 27.9 bits (59), Expect = 9.5 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +3 Query: 657 VTEPKDEPVPLEPTSEVRSXAPGPXPXP 740 V EP +EP P SE+ S P P P P Sbjct: 547 VPEPTEEP-PTPTDSEIDSPTPAPAPGP 573 >Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical protein R11A8.7b protein. Length = 2584 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%) Frame = +3 Query: 636 PQPDHILVTEPKDEPVPL---EPTSE 704 P+P+ ++++EP EPVP+ EP E Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672 >Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical protein R11A8.7a protein. Length = 2606 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%) Frame = +3 Query: 636 PQPDHILVTEPKDEPVPL---EPTSE 704 P+P+ ++++EP EPVP+ EP E Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672 >Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein R11A8.7d protein. Length = 1427 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%) Frame = +3 Query: 636 PQPDHILVTEPKDEPVPL---EPTSE 704 P+P+ ++++EP EPVP+ EP E Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493 >Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein R11A8.7c protein. Length = 1405 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%) Frame = +3 Query: 636 PQPDHILVTEPKDEPVPL---EPTSE 704 P+P+ ++++EP EPVP+ EP E Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493 >Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein R11A8.7b protein. Length = 2584 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%) Frame = +3 Query: 636 PQPDHILVTEPKDEPVPL---EPTSE 704 P+P+ ++++EP EPVP+ EP E Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672 >Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein R11A8.7a protein. Length = 2606 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%) Frame = +3 Query: 636 PQPDHILVTEPKDEPVPL---EPTSE 704 P+P+ ++++EP EPVP+ EP E Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672 >AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical protein F19B10.4 protein. Length = 464 Score = 27.9 bits (59), Expect = 9.5 Identities = 17/55 (30%), Positives = 23/55 (41%) Frame = +2 Query: 533 QHCYQTCASQARSTRNQGQNHVAVGPARQXRPEEATTRPHPGDRAQGRARAPRAD 697 Q C Q S +S N + GPA++ RPE P DR + + R D Sbjct: 113 QSCLQNELSALKSANNAMKTSKN-GPAKEHRPENGKLSPETLDRGKEENQEGRQD 166 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,068,762 Number of Sequences: 27780 Number of extensions: 394736 Number of successful extensions: 1629 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1562 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2072006206 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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