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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O20
         (833 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g35530.1 68418.m04226 40S ribosomal protein S3 (RPS3C)             351   4e-97
At3g53870.1 68416.m05951 40S ribosomal protein S3 (RPS3B) riboso...   348   3e-96
At2g31610.1 68415.m03862 40S ribosomal protein S3 (RPS3A)             347   4e-96
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila...    32   0.54 
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila...    32   0.54 
At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel...    31   0.94 
At2g25150.1 68415.m03008 transferase family protein similar to 1...    31   0.94 
At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel...    30   1.6  
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t...    29   5.0  
At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid t...    29   5.0  
At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P...    28   6.6  
At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel...    28   6.6  
At3g47400.1 68416.m05154 pectinesterase family protein similar t...    28   6.6  
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex...    28   6.6  
At3g24540.1 68416.m03082 protein kinase family protein contains ...    28   8.8  
At1g61080.1 68414.m06877 proline-rich family protein                   28   8.8  
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro...    28   8.8  
At1g20130.1 68414.m02518 family II extracellular lipase, putativ...    28   8.8  
At1g09830.1 68414.m01105 phosphoribosylamine--glycine ligase (PU...    28   8.8  

>At5g35530.1 68418.m04226 40S ribosomal protein S3 (RPS3C)
          Length = 248

 Score =  351 bits (862), Expect = 4e-97
 Identities = 168/226 (74%), Positives = 189/226 (83%)
 Frame = +3

Query: 42  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221
           ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 5   ISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64

Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401
           RIRELTS+VQKRF  P+ SVELYAEKVA RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65  RIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124

Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581
           F+MESGA+GCEV+VSGKLR  RAKSMKF DG M+ SG P  +Y++ A RHVLLRQGVLG+
Sbjct: 125 FVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGL 184

Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSXA 719
           KVKIML WD +G  GP  P PD +++  PK++ V + P   V   A
Sbjct: 185 KVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAA 230


>At3g53870.1 68416.m05951 40S ribosomal protein S3 (RPS3B) ribosomal
           protein S3a - Xenopus laevis, PIR:R3XL3A
          Length = 249

 Score =  348 bits (855), Expect = 3e-96
 Identities = 170/236 (72%), Positives = 194/236 (82%)
 Frame = +3

Query: 42  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221
           ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 5   ISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64

Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401
           RIRELTS+VQKRF  P  SVELYAEKV  RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65  RIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124

Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581
           F+MESGA+GCEV+VSGKLR  RAKSMKF DG M+ SG P  +Y+++A RHVLLRQGVLGI
Sbjct: 125 FVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGI 184

Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXPVAA 749
           KVK+ML WD +G +GPK P PD +++  PK+E     P ++V + A      P+ A
Sbjct: 185 KVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAP-AQVAAPAALVADAPLTA 239


>At2g31610.1 68415.m03862 40S ribosomal protein S3 (RPS3A)
          Length = 250

 Score =  347 bits (854), Expect = 4e-96
 Identities = 168/218 (77%), Positives = 185/218 (84%)
 Frame = +3

Query: 42  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221
           ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 5   ISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64

Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401
           RIRELTS+VQKRF  P  SVELYAEKV  RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65  RIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124

Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581
           F+MESGA+GCEV+VSGKLR  RAKSMKF DG M+ SG P  +Y++ A RHVLLRQGVLGI
Sbjct: 125 FVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGI 184

Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEP 695
           KVKIML WD  G +GPK P PD +++  PKD+ V   P
Sbjct: 185 KVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAP 222


>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
           to SPOP (novel nuclear speckle-type protein)
           (SP:O43791)   [Homo sapiens]; contains Pfam PF00651 :
           BTB/POZ domain; contains Pfam PF00917: MATH domain
          Length = 295

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 239 SQLTDSASFLSEHTLCPGGHNNDLRADGSD 150
           S+L +  + LSEH+L   GH  +L ADG D
Sbjct: 255 SELLEYVARLSEHSLTSSGHRKELFADGCD 284


>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
           to SPOP (novel nuclear speckle-type protein)
           (SP:O43791)   [Homo sapiens]; contains Pfam PF00651 :
           BTB/POZ domain; contains Pfam PF00917: MATH domain
          Length = 406

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 239 SQLTDSASFLSEHTLCPGGHNNDLRADGSD 150
           S+L +  + LSEH+L   GH  +L ADG D
Sbjct: 366 SELLEYVARLSEHSLTSSGHRKELFADGCD 395


>At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel,
           putative (CNGC16) similar to cyclic nucleotide and
           calmodulin-regulated ion channel (cngc6) GI:4581207 from
           [Arabidopsis thaliana]
          Length = 705

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = -1

Query: 338 FGLGDSAKTTSSHLFSIQFYRLLWNVESLLYYGSQLTDSASFLSEHTL 195
           FG   +   TSS  F   FY L W + +L  YG  L  +AS LS  T+
Sbjct: 309 FGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSL--AASTLSSETI 354


>At2g25150.1 68415.m03008 transferase family protein similar to
           10-deacetylbaccatin III-10-O-acetyl transferase
           [gi:6746554], 2-debenzoyl-7,13-diacetylbaccatin
           III-2-O-benzoyl transferase [gi:11559716] from Taxus
           cuspidata; contains Pfam transferase family domain
           PF00248; contains EST gb:R65039
          Length = 461

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 170 LRADGSDPDFHAGVAVLGQLPSEELIEFRLENSISNK 60
           L+   SDP    GV V+ +LP + ++EF+ E +   K
Sbjct: 418 LKPSKSDPSMEGGVKVIMKLPRDAMVEFKREMATMKK 454


>At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel,
           putative (CNGC17) similar to cyclic nucleotide and
           calmodulin-regulated ion channel cngc5 GI:4581205 from
           [Arabidopsis thaliana]
          Length = 720

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 338 FGLGDSAKTTSSHLFSIQFYRLLWNVESLLYYGSQLTDSASFLSEHT 198
           FG   +    SS  F   FY L W ++ L  YG  L+ +  F+ E T
Sbjct: 333 FGNAITKNVVSSQFFERYFYCLWWGLQQLSSYGQNLS-TTMFMGETT 378


>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein identical to
           pEARLI 1 (Accession No. L43080): an Arabidopsis member
           of a conserved gene family (PGF95-099), Plant Physiol.
           109 (4), 1497 (1995); contains Pfam protease
           inhibitor/seed storage/LTP family domain PF00234
          Length = 168

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
 Frame = +3

Query: 636 PQPDHILVTEPKDEPVPLE-----PTSEVRSXA-PGPXPXPVAAXR 755
           P P H  V  PK +PVP       P+  V S + P P P PV   R
Sbjct: 32  PSPKHKPVPSPKPKPVPSPKPKPVPSPSVPSPSVPSPNPRPVTPPR 77


>At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to pEARLI
           1 (Accession No. L43080): an Arabidopsis member of a
           conserved gene family (PGF95-099), Plant Physiol. 109
           (4), 1497 (1995); contains Pfam protease inhibitor/seed
           storage/LTP family domain PF00234
          Length = 161

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = +3

Query: 633 KPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXPVAAXR 755
           KP P    V  PK +PV   P    R   P P P PV   R
Sbjct: 31  KPSPKPKPVPSPKPKPVQCPPPP--RPSVPSPNPRPVTPPR 69


>At5g18570.1 68418.m02195 GTP1/OBG family protein similar to
           SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
           subtilis}; contains Pfam profile PF01018: GTP1/OBG
           family
          Length = 681

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
 Frame = +3

Query: 375 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG--LMIHSGDPCNDYVNTATR 548
           RRA         +SG R   VV +G  R  +  + +++D      H  D C   VN + +
Sbjct: 578 RRAAINEFEVFRDSGTRAWHVVGAGLQRFVQMTNWRYMDSDKRFQHVLDACG--VNKSLK 635

Query: 549 HVLLRQGVLGIKVKIMLPWDQQGXNGPKKP 638
           ++ +++G   I  ++ L W     NG  +P
Sbjct: 636 NMGVKEGDTVIVGEMELIW-HDSANGSSRP 664


>At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel,
           putative (CNGC18) similar to cyclic nucleotide and
           calmodulin-regulated ion channel (cngc6) GI:4581207 from
           [Arabidopsis thaliana]
          Length = 706

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = -1

Query: 398 ENTIASTTYSETSDKLVS*RFGLGDSAKTT---SSHLFSIQFYRLLWNVESLLYYGSQLT 228
           +N     ++ + +    + +FG+   A TT   ++   S   Y L W + +L  YG  +T
Sbjct: 278 QNVTQVLSHCDATSSTTNFKFGMFAEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNIT 337

Query: 227 DSASFLSEHTLC 192
            S  +L E   C
Sbjct: 338 TSV-YLGETLFC 348


>At3g47400.1 68416.m05154 pectinesterase family protein similar to
           pectinesterase (EC 3.1.1.11) from Vitis vinifera
           GI:15081598, Lycopersicon esculentum SP|Q43143
           SP|P14280; contains Pfam profile PF01095 pectinesterase
          Length = 594

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 624 GPKKPQP-DHILVTEPKDEPVPLEPTSEVRSXAPGPXPXPVAA 749
           G   P P DH +   P+  P P  PTS   + +P P P PVAA
Sbjct: 31  GTDAPPPWDHNVSPPPETAPSP-TPTSSPSTTSP-PSPGPVAA 71


>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 956

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 633 KPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740
           KPQP      +P++ P P  P  E       P P P
Sbjct: 535 KPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQP 570



 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 633 KPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740
           KPQP      +P++ P P  P  E       P P P
Sbjct: 551 KPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQP 586


>At3g24540.1 68416.m03082 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 509

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
 Frame = +3

Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVR-SXAPGPXP 734
           K ++   W Q   +    P P  + V EP     P  P + V  S +P P P
Sbjct: 24  KTQLKSRWQQITMSSASSPPPPQVFVPEPLFSEPPPPPKAPVNVSLSPPPPP 75


>At1g61080.1 68414.m06877 proline-rich family protein 
          Length = 907

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = +3

Query: 597 LPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740
           +P    G  GP  P P   L       P P  P   + + A GP P P
Sbjct: 580 MPMGNSGSGGPPPPPPPMPLANGATPPPPP--PPMAMANGAAGPPPPP 625


>At1g31810.1 68414.m03904 formin homology 2 domain-containing
           protein / FH2 domain-containing protein low similarity
           to SP|P48608 Diaphanous protein {Drosophila
           melanogaster}; contains Pfam profile PF02181: Formin
           Homology 2(FH2) Domain
          Length = 1201

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +3

Query: 627 PKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740
           P  P P   +   PK    P  P S  R  AP P P P
Sbjct: 683 PPPPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPP 720


>At1g20130.1 68414.m02518 family II extracellular lipase, putative
           contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
          Length = 1006

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = +3

Query: 627 PKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740
           PK   P     T PK +P P  P     +  P P P P
Sbjct: 60  PKPVPPPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVP 97


>At1g09830.1 68414.m01105 phosphoribosylamine--glycine ligase (PUR2)
           Identical to phosphoribosylamine--glycine ligase,
           chloroplast [precursor] SP:P52420 from [Arabidopsis
           thaliana]
          Length = 532

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 417 GARGCEVVVSGKLRGQRAKSMKFVDG 494
           G+ GC+VVV   L G+ A     VDG
Sbjct: 273 GSAGCQVVVEEFLEGEEASFFALVDG 298


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,424,867
Number of Sequences: 28952
Number of extensions: 376875
Number of successful extensions: 1228
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1921616800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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