Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O20
(833 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g35530.1 68418.m04226 40S ribosomal protein S3 (RPS3C) 351 4e-97
At3g53870.1 68416.m05951 40S ribosomal protein S3 (RPS3B) riboso... 348 3e-96
At2g31610.1 68415.m03862 40S ribosomal protein S3 (RPS3A) 347 4e-96
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 32 0.54
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 32 0.54
At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel... 31 0.94
At2g25150.1 68415.m03008 transferase family protein similar to 1... 31 0.94
At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel... 30 1.6
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 29 5.0
At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid t... 29 5.0
At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P... 28 6.6
At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel... 28 6.6
At3g47400.1 68416.m05154 pectinesterase family protein similar t... 28 6.6
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 6.6
At3g24540.1 68416.m03082 protein kinase family protein contains ... 28 8.8
At1g61080.1 68414.m06877 proline-rich family protein 28 8.8
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 8.8
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 8.8
At1g09830.1 68414.m01105 phosphoribosylamine--glycine ligase (PU... 28 8.8
>At5g35530.1 68418.m04226 40S ribosomal protein S3 (RPS3C)
Length = 248
Score = 351 bits (862), Expect = 4e-97
Identities = 168/226 (74%), Positives = 189/226 (83%)
Frame = +3
Query: 42 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401
RIRELTS+VQKRF P+ SVELYAEKVA RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581
F+MESGA+GCEV+VSGKLR RAKSMKF DG M+ SG P +Y++ A RHVLLRQGVLG+
Sbjct: 125 FVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGL 184
Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSXA 719
KVKIML WD +G GP P PD +++ PK++ V + P V A
Sbjct: 185 KVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAA 230
>At3g53870.1 68416.m05951 40S ribosomal protein S3 (RPS3B) ribosomal
protein S3a - Xenopus laevis, PIR:R3XL3A
Length = 249
Score = 348 bits (855), Expect = 3e-96
Identities = 170/236 (72%), Positives = 194/236 (82%)
Frame = +3
Query: 42 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401
RIRELTS+VQKRF P SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581
F+MESGA+GCEV+VSGKLR RAKSMKF DG M+ SG P +Y+++A RHVLLRQGVLGI
Sbjct: 125 FVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGI 184
Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXPVAA 749
KVK+ML WD +G +GPK P PD +++ PK+E P ++V + A P+ A
Sbjct: 185 KVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAP-AQVAAPAALVADAPLTA 239
>At2g31610.1 68415.m03862 40S ribosomal protein S3 (RPS3A)
Length = 250
Score = 347 bits (854), Expect = 4e-96
Identities = 168/218 (77%), Positives = 185/218 (84%)
Frame = +3
Query: 42 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401
RIRELTS+VQKRF P SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581
F+MESGA+GCEV+VSGKLR RAKSMKF DG M+ SG P +Y++ A RHVLLRQGVLGI
Sbjct: 125 FVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGI 184
Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEP 695
KVKIML WD G +GPK P PD +++ PKD+ V P
Sbjct: 185 KVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAP 222
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 239 SQLTDSASFLSEHTLCPGGHNNDLRADGSD 150
S+L + + LSEH+L GH +L ADG D
Sbjct: 255 SELLEYVARLSEHSLTSSGHRKELFADGCD 284
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 239 SQLTDSASFLSEHTLCPGGHNNDLRADGSD 150
S+L + + LSEH+L GH +L ADG D
Sbjct: 366 SELLEYVARLSEHSLTSSGHRKELFADGCD 395
>At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel,
putative (CNGC16) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 705
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 338 FGLGDSAKTTSSHLFSIQFYRLLWNVESLLYYGSQLTDSASFLSEHTL 195
FG + TSS F FY L W + +L YG L +AS LS T+
Sbjct: 309 FGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSL--AASTLSSETI 354
>At2g25150.1 68415.m03008 transferase family protein similar to
10-deacetylbaccatin III-10-O-acetyl transferase
[gi:6746554], 2-debenzoyl-7,13-diacetylbaccatin
III-2-O-benzoyl transferase [gi:11559716] from Taxus
cuspidata; contains Pfam transferase family domain
PF00248; contains EST gb:R65039
Length = 461
Score = 31.1 bits (67), Expect = 0.94
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 170 LRADGSDPDFHAGVAVLGQLPSEELIEFRLENSISNK 60
L+ SDP GV V+ +LP + ++EF+ E + K
Sbjct: 418 LKPSKSDPSMEGGVKVIMKLPRDAMVEFKREMATMKK 454
>At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel,
putative (CNGC17) similar to cyclic nucleotide and
calmodulin-regulated ion channel cngc5 GI:4581205 from
[Arabidopsis thaliana]
Length = 720
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 338 FGLGDSAKTTSSHLFSIQFYRLLWNVESLLYYGSQLTDSASFLSEHT 198
FG + SS F FY L W ++ L YG L+ + F+ E T
Sbjct: 333 FGNAITKNVVSSQFFERYFYCLWWGLQQLSSYGQNLS-TTMFMGETT 378
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Frame = +3
Query: 636 PQPDHILVTEPKDEPVPLE-----PTSEVRSXA-PGPXPXPVAAXR 755
P P H V PK +PVP P+ V S + P P P PV R
Sbjct: 32 PSPKHKPVPSPKPKPVPSPKPKPVPSPSVPSPSVPSPNPRPVTPPR 77
>At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 161
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 633 KPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXPVAAXR 755
KP P V PK +PV P R P P P PV R
Sbjct: 31 KPSPKPKPVPSPKPKPVQCPPPP--RPSVPSPNPRPVTPPR 69
>At5g18570.1 68418.m02195 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 681
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 375 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG--LMIHSGDPCNDYVNTATR 548
RRA +SG R VV +G R + + +++D H D C VN + +
Sbjct: 578 RRAAINEFEVFRDSGTRAWHVVGAGLQRFVQMTNWRYMDSDKRFQHVLDACG--VNKSLK 635
Query: 549 HVLLRQGVLGIKVKIMLPWDQQGXNGPKKP 638
++ +++G I ++ L W NG +P
Sbjct: 636 NMGVKEGDTVIVGEMELIW-HDSANGSSRP 664
>At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel,
putative (CNGC18) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 706
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -1
Query: 398 ENTIASTTYSETSDKLVS*RFGLGDSAKTT---SSHLFSIQFYRLLWNVESLLYYGSQLT 228
+N ++ + + + +FG+ A TT ++ S Y L W + +L YG +T
Sbjct: 278 QNVTQVLSHCDATSSTTNFKFGMFAEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNIT 337
Query: 227 DSASFLSEHTLC 192
S +L E C
Sbjct: 338 TSV-YLGETLFC 348
>At3g47400.1 68416.m05154 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Vitis vinifera
GI:15081598, Lycopersicon esculentum SP|Q43143
SP|P14280; contains Pfam profile PF01095 pectinesterase
Length = 594
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 624 GPKKPQP-DHILVTEPKDEPVPLEPTSEVRSXAPGPXPXPVAA 749
G P P DH + P+ P P PTS + +P P P PVAA
Sbjct: 31 GTDAPPPWDHNVSPPPETAPSP-TPTSSPSTTSP-PSPGPVAA 71
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 633 KPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740
KPQP +P++ P P P E P P P
Sbjct: 535 KPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQP 570
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 633 KPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740
KPQP +P++ P P P E P P P
Sbjct: 551 KPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQP 586
>At3g24540.1 68416.m03082 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 509
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +3
Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVR-SXAPGPXP 734
K ++ W Q + P P + V EP P P + V S +P P P
Sbjct: 24 KTQLKSRWQQITMSSASSPPPPQVFVPEPLFSEPPPPPKAPVNVSLSPPPPP 75
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +3
Query: 597 LPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740
+P G GP P P L P P P + + A GP P P
Sbjct: 580 MPMGNSGSGGPPPPPPPMPLANGATPPPPP--PPMAMANGAAGPPPPP 625
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 627 PKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740
P P P + PK P P S R AP P P P
Sbjct: 683 PPPPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPP 720
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 627 PKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740
PK P T PK +P P P + P P P P
Sbjct: 60 PKPVPPPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVP 97
>At1g09830.1 68414.m01105 phosphoribosylamine--glycine ligase (PUR2)
Identical to phosphoribosylamine--glycine ligase,
chloroplast [precursor] SP:P52420 from [Arabidopsis
thaliana]
Length = 532
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 417 GARGCEVVVSGKLRGQRAKSMKFVDG 494
G+ GC+VVV L G+ A VDG
Sbjct: 273 GSAGCQVVVEEFLEGEEASFFALVDG 298
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,424,867
Number of Sequences: 28952
Number of extensions: 376875
Number of successful extensions: 1228
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1921616800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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