BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O20 (833 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g35530.1 68418.m04226 40S ribosomal protein S3 (RPS3C) 351 4e-97 At3g53870.1 68416.m05951 40S ribosomal protein S3 (RPS3B) riboso... 348 3e-96 At2g31610.1 68415.m03862 40S ribosomal protein S3 (RPS3A) 347 4e-96 At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 32 0.54 At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 32 0.54 At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel... 31 0.94 At2g25150.1 68415.m03008 transferase family protein similar to 1... 31 0.94 At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel... 30 1.6 At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 29 5.0 At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid t... 29 5.0 At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P... 28 6.6 At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel... 28 6.6 At3g47400.1 68416.m05154 pectinesterase family protein similar t... 28 6.6 At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 6.6 At3g24540.1 68416.m03082 protein kinase family protein contains ... 28 8.8 At1g61080.1 68414.m06877 proline-rich family protein 28 8.8 At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 8.8 At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 8.8 At1g09830.1 68414.m01105 phosphoribosylamine--glycine ligase (PU... 28 8.8 >At5g35530.1 68418.m04226 40S ribosomal protein S3 (RPS3C) Length = 248 Score = 351 bits (862), Expect = 4e-97 Identities = 168/226 (74%), Positives = 189/226 (83%) Frame = +3 Query: 42 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221 ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR Sbjct: 5 ISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64 Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401 RIRELTS+VQKRF P+ SVELYAEKVA RGLCAIAQAESLRYKL+GGLAVRRACYGVLR Sbjct: 65 RIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124 Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581 F+MESGA+GCEV+VSGKLR RAKSMKF DG M+ SG P +Y++ A RHVLLRQGVLG+ Sbjct: 125 FVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGL 184 Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSXA 719 KVKIML WD +G GP P PD +++ PK++ V + P V A Sbjct: 185 KVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAA 230 >At3g53870.1 68416.m05951 40S ribosomal protein S3 (RPS3B) ribosomal protein S3a - Xenopus laevis, PIR:R3XL3A Length = 249 Score = 348 bits (855), Expect = 3e-96 Identities = 170/236 (72%), Positives = 194/236 (82%) Frame = +3 Query: 42 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221 ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR Sbjct: 5 ISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64 Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401 RIRELTS+VQKRF P SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLR Sbjct: 65 RIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124 Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581 F+MESGA+GCEV+VSGKLR RAKSMKF DG M+ SG P +Y+++A RHVLLRQGVLGI Sbjct: 125 FVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGI 184 Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXPVAA 749 KVK+ML WD +G +GPK P PD +++ PK+E P ++V + A P+ A Sbjct: 185 KVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAP-AQVAAPAALVADAPLTA 239 >At2g31610.1 68415.m03862 40S ribosomal protein S3 (RPS3A) Length = 250 Score = 347 bits (854), Expect = 4e-96 Identities = 168/218 (77%), Positives = 185/218 (84%) Frame = +3 Query: 42 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221 ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR Sbjct: 5 ISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64 Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401 RIRELTS+VQKRF P SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLR Sbjct: 65 RIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124 Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581 F+MESGA+GCEV+VSGKLR RAKSMKF DG M+ SG P +Y++ A RHVLLRQGVLGI Sbjct: 125 FVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGI 184 Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEP 695 KVKIML WD G +GPK P PD +++ PKD+ V P Sbjct: 185 KVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAP 222 >At3g06190.2 68416.m00712 speckle-type POZ protein-related similar to SPOP (novel nuclear speckle-type protein) (SP:O43791) [Homo sapiens]; contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain Length = 295 Score = 31.9 bits (69), Expect = 0.54 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 239 SQLTDSASFLSEHTLCPGGHNNDLRADGSD 150 S+L + + LSEH+L GH +L ADG D Sbjct: 255 SELLEYVARLSEHSLTSSGHRKELFADGCD 284 >At3g06190.1 68416.m00711 speckle-type POZ protein-related similar to SPOP (novel nuclear speckle-type protein) (SP:O43791) [Homo sapiens]; contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain Length = 406 Score = 31.9 bits (69), Expect = 0.54 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 239 SQLTDSASFLSEHTLCPGGHNNDLRADGSD 150 S+L + + LSEH+L GH +L ADG D Sbjct: 366 SELLEYVARLSEHSLTSSGHRKELFADGCD 395 >At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel, putative (CNGC16) similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from [Arabidopsis thaliana] Length = 705 Score = 31.1 bits (67), Expect = 0.94 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = -1 Query: 338 FGLGDSAKTTSSHLFSIQFYRLLWNVESLLYYGSQLTDSASFLSEHTL 195 FG + TSS F FY L W + +L YG L +AS LS T+ Sbjct: 309 FGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSL--AASTLSSETI 354 >At2g25150.1 68415.m03008 transferase family protein similar to 10-deacetylbaccatin III-10-O-acetyl transferase [gi:6746554], 2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase [gi:11559716] from Taxus cuspidata; contains Pfam transferase family domain PF00248; contains EST gb:R65039 Length = 461 Score = 31.1 bits (67), Expect = 0.94 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -1 Query: 170 LRADGSDPDFHAGVAVLGQLPSEELIEFRLENSISNK 60 L+ SDP GV V+ +LP + ++EF+ E + K Sbjct: 418 LKPSKSDPSMEGGVKVIMKLPRDAMVEFKREMATMKK 454 >At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel, putative (CNGC17) similar to cyclic nucleotide and calmodulin-regulated ion channel cngc5 GI:4581205 from [Arabidopsis thaliana] Length = 720 Score = 30.3 bits (65), Expect = 1.6 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -1 Query: 338 FGLGDSAKTTSSHLFSIQFYRLLWNVESLLYYGSQLTDSASFLSEHT 198 FG + SS F FY L W ++ L YG L+ + F+ E T Sbjct: 333 FGNAITKNVVSSQFFERYFYCLWWGLQQLSSYGQNLS-TTMFMGETT 378 >At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein identical to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 Length = 168 Score = 28.7 bits (61), Expect = 5.0 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Frame = +3 Query: 636 PQPDHILVTEPKDEPVPLE-----PTSEVRSXA-PGPXPXPVAAXR 755 P P H V PK +PVP P+ V S + P P P PV R Sbjct: 32 PSPKHKPVPSPKPKPVPSPKPKPVPSPSVPSPSVPSPNPRPVTPPR 77 >At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 Length = 161 Score = 28.7 bits (61), Expect = 5.0 Identities = 16/41 (39%), Positives = 17/41 (41%) Frame = +3 Query: 633 KPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXPVAAXR 755 KP P V PK +PV P R P P P PV R Sbjct: 31 KPSPKPKPVPSPKPKPVQCPPPP--RPSVPSPNPRPVTPPR 69 >At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P20964 Spo0B-associated GTP-binding protein {Bacillus subtilis}; contains Pfam profile PF01018: GTP1/OBG family Length = 681 Score = 28.3 bits (60), Expect = 6.6 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%) Frame = +3 Query: 375 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG--LMIHSGDPCNDYVNTATR 548 RRA +SG R VV +G R + + +++D H D C VN + + Sbjct: 578 RRAAINEFEVFRDSGTRAWHVVGAGLQRFVQMTNWRYMDSDKRFQHVLDACG--VNKSLK 635 Query: 549 HVLLRQGVLGIKVKIMLPWDQQGXNGPKKP 638 ++ +++G I ++ L W NG +P Sbjct: 636 NMGVKEGDTVIVGEMELIW-HDSANGSSRP 664 >At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel, putative (CNGC18) similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from [Arabidopsis thaliana] Length = 706 Score = 28.3 bits (60), Expect = 6.6 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Frame = -1 Query: 398 ENTIASTTYSETSDKLVS*RFGLGDSAKTT---SSHLFSIQFYRLLWNVESLLYYGSQLT 228 +N ++ + + + +FG+ A TT ++ S Y L W + +L YG +T Sbjct: 278 QNVTQVLSHCDATSSTTNFKFGMFAEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNIT 337 Query: 227 DSASFLSEHTLC 192 S +L E C Sbjct: 338 TSV-YLGETLFC 348 >At3g47400.1 68416.m05154 pectinesterase family protein similar to pectinesterase (EC 3.1.1.11) from Vitis vinifera GI:15081598, Lycopersicon esculentum SP|Q43143 SP|P14280; contains Pfam profile PF01095 pectinesterase Length = 594 Score = 28.3 bits (60), Expect = 6.6 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +3 Query: 624 GPKKPQP-DHILVTEPKDEPVPLEPTSEVRSXAPGPXPXPVAA 749 G P P DH + P+ P P PTS + +P P P PVAA Sbjct: 31 GTDAPPPWDHNVSPPPETAPSP-TPTSSPSTTSP-PSPGPVAA 71 >At3g19020.1 68416.m02415 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 956 Score = 28.3 bits (60), Expect = 6.6 Identities = 12/36 (33%), Positives = 15/36 (41%) Frame = +3 Query: 633 KPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740 KPQP +P++ P P P E P P P Sbjct: 535 KPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQP 570 Score = 28.3 bits (60), Expect = 6.6 Identities = 12/36 (33%), Positives = 15/36 (41%) Frame = +3 Query: 633 KPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740 KPQP +P++ P P P E P P P Sbjct: 551 KPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQP 586 >At3g24540.1 68416.m03082 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 509 Score = 27.9 bits (59), Expect = 8.8 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%) Frame = +3 Query: 582 KVKIMLPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVR-SXAPGPXP 734 K ++ W Q + P P + V EP P P + V S +P P P Sbjct: 24 KTQLKSRWQQITMSSASSPPPPQVFVPEPLFSEPPPPPKAPVNVSLSPPPPP 75 >At1g61080.1 68414.m06877 proline-rich family protein Length = 907 Score = 27.9 bits (59), Expect = 8.8 Identities = 15/48 (31%), Positives = 18/48 (37%) Frame = +3 Query: 597 LPWDQQGXNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740 +P G GP P P L P P P + + A GP P P Sbjct: 580 MPMGNSGSGGPPPPPPPMPLANGATPPPPP--PPMAMANGAAGPPPPP 625 >At1g31810.1 68414.m03904 formin homology 2 domain-containing protein / FH2 domain-containing protein low similarity to SP|P48608 Diaphanous protein {Drosophila melanogaster}; contains Pfam profile PF02181: Formin Homology 2(FH2) Domain Length = 1201 Score = 27.9 bits (59), Expect = 8.8 Identities = 14/38 (36%), Positives = 15/38 (39%) Frame = +3 Query: 627 PKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740 P P P + PK P P S R AP P P P Sbjct: 683 PPPPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPP 720 >At1g20130.1 68414.m02518 family II extracellular lipase, putative contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566) Length = 1006 Score = 27.9 bits (59), Expect = 8.8 Identities = 13/38 (34%), Positives = 15/38 (39%) Frame = +3 Query: 627 PKKPQPDHILVTEPKDEPVPLEPTSEVRSXAPGPXPXP 740 PK P T PK +P P P + P P P P Sbjct: 60 PKPVPPPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVP 97 >At1g09830.1 68414.m01105 phosphoribosylamine--glycine ligase (PUR2) Identical to phosphoribosylamine--glycine ligase, chloroplast [precursor] SP:P52420 from [Arabidopsis thaliana] Length = 532 Score = 27.9 bits (59), Expect = 8.8 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 417 GARGCEVVVSGKLRGQRAKSMKFVDG 494 G+ GC+VVV L G+ A VDG Sbjct: 273 GSAGCQVVVEEFLEGEEASFFALVDG 298 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,424,867 Number of Sequences: 28952 Number of extensions: 376875 Number of successful extensions: 1228 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1084 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1207 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1921616800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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