Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O19
(828 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 285 2e-77
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 283 1e-76
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 241 6e-64
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 224 8e-59
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 133 2e-31
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 2e-25
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 93 2e-19
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 9e-09
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 8e-04
SB_43628| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.1
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 3.5
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.6
SB_13309| Best HMM Match : EGF (HMM E-Value=0) 29 4.6
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.6
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 29 4.6
SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_14570| Best HMM Match : Mab-21 (HMM E-Value=0.00069) 29 6.1
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 6.1
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 285 bits (700), Expect = 2e-77
Identities = 133/162 (82%), Positives = 147/162 (90%)
Frame = +1
Query: 157 HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 336
HGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D
Sbjct: 23 HGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPV 82
Query: 337 VQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNA 516
V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +A
Sbjct: 83 VARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDA 142
Query: 517 VITVPAYFNDSQRQATKDAGTTSGLNVLRIINEPTAAAIAYG 642
V+TVPAYF+DSQRQATKDAGT +GLNVLRIINEPTAAAIAYG
Sbjct: 143 VVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Score = 81.4 bits (192), Expect = 8e-16
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = +2
Query: 665 ERNVLIFDLGGGXFDVSILTIEDGIFEVXSTAGDXXLGGXXFXNRXVXXFXXEF 826
ERNVLI+DLGGG FDVS+LTIEDGIFEV STAGD LGG F N+ V F +F
Sbjct: 192 ERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQF 245
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2
Query: 89 MAKAPAVGIDLGTT 130
MAK PAVGIDLGTT
Sbjct: 1 MAKTPAVGIDLGTT 14
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 283 bits (694), Expect = 1e-76
Identities = 132/162 (81%), Positives = 149/162 (91%)
Frame = +1
Query: 157 HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 336
+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DAT
Sbjct: 23 NGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDAT 82
Query: 337 VQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNA 516
VQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +A
Sbjct: 83 VQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSA 142
Query: 517 VITVPAYFNDSQRQATKDAGTTSGLNVLRIINEPTAAAIAYG 642
VITVPAYFNDSQRQATKDAGT +GLNVLR+INEPTAAA+AYG
Sbjct: 143 VITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYG 184
Score = 80.2 bits (189), Expect = 2e-15
Identities = 40/56 (71%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +2
Query: 662 GERNVLIFDLGGGXFDVSILTIEDG-IFEVXSTAGDXXLGGXXFXNRXVXXFXXEF 826
GE+NVLIFDLGGG FDVSILTI+DG +FEV STAGD LGG F NR V F EF
Sbjct: 191 GEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEF 246
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 89 MAKAPAVGIDLGTT 130
M KAPA+GIDLGTT
Sbjct: 1 MGKAPAIGIDLGTT 14
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 241 bits (589), Expect = 6e-64
Identities = 117/167 (70%), Positives = 138/167 (82%), Gaps = 1/167 (0%)
Frame = +1
Query: 157 HGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDA 333
+G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP NT+FDAKRLIGR ++D
Sbjct: 720 NGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDT 779
Query: 334 TVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQN 513
+VQ D+K +PF+VV KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +
Sbjct: 780 SVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTH 839
Query: 514 AVITVPAYFNDSQRQATKDAGTTSGLNVLRIINEPTAAAIAYGS*QK 654
AV+TVPAYFND+QRQATKDAG +GL V+RIINEPTAAAIAYG +K
Sbjct: 840 AVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK 886
Score = 68.5 bits (160), Expect = 6e-12
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +2
Query: 662 GERNVLIFDLGGGXFDVSILTIEDGIFEVXSTAGDXXLGGXXFXNRXVXXF 814
GE+N+L+FDLGGG FDVS+LTI++G+FEV +T GD LGG F + F
Sbjct: 888 GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHF 938
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 224 bits (547), Expect = 8e-59
Identities = 116/165 (70%), Positives = 126/165 (76%), Gaps = 25/165 (15%)
Frame = +1
Query: 157 HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 336
HGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D
Sbjct: 23 HGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPG 82
Query: 337 VQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV----------------------- 447
V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 83 VKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAE 142
Query: 448 --SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 576
SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 143 EISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
Score = 117 bits (282), Expect = 1e-26
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +1
Query: 442 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTTSGLNVLRIINEPT 621
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG SGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 622 AAAIAYG 642
AAAIAYG
Sbjct: 271 AAAIAYG 277
Score = 77.8 bits (183), Expect = 1e-14
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +2
Query: 665 ERNVLIFDLGGGXFDVSILTIEDGIFEVXSTAGDXXLGGXXFXNRXVXXFXXEF 826
ERNVLIFDLGGG FDVS+L+IEDGIFEV ST GD LGG F N V F +F
Sbjct: 285 ERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQF 338
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 89 MAKAPAVGIDLGTT 130
M KAPA+GIDLGTT
Sbjct: 1 MTKAPAIGIDLGTT 14
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 133 bits (321), Expect = 2e-31
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Frame = +1
Query: 160 GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 339
G+++I +++ ++ PS VAFTD L+G+ A +Q +NP NTI+DAKR IG+ F +
Sbjct: 53 GRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQEL 112
Query: 340 QADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNA 516
K + F V +D G V KG PEE+ V+ K++ AE L TV A
Sbjct: 113 LEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKA 172
Query: 517 VITVPAYFNDSQRQATKDAGTTSGLNVLRIINEPTAAAIAYG 642
V++VPA F+ QR AT A + +G+ VLR+INEPTAAA+AYG
Sbjct: 173 VMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYG 214
Score = 48.4 bits (110), Expect = 7e-06
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +2
Query: 662 GERNVLIFDLGGGXFDVSILTIEDGIFEVXSTAGDXXLGGXXFXNR 799
G NV++ DLGGG DVS+L I+ G+F + AG+ LGG F R
Sbjct: 220 GVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNAR 265
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 113 bits (272), Expect = 2e-25
Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
Frame = +1
Query: 274 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 450
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 451 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTTSGLNVLRIINEPTAAA 630
+M+ T++K TAE L V + VI+VP+Y+ D QR+ DA T+GLN LR++N+ TA +
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237
Query: 631 IAYG 642
+AYG
Sbjct: 238 LAYG 241
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 160 GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 264
G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 21 GGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +2
Query: 668 RNVLIFDLGGGXFDVSILTIEDGIFEVXSTAGDXXLGGXXFXNRXVXXFXXEF 826
RNV+ D+G V I G +V STA + LGG F V F EF
Sbjct: 253 RNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEF 305
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 93.1 bits (221), Expect = 2e-19
Identities = 55/106 (51%), Positives = 70/106 (66%), Gaps = 24/106 (22%)
Frame = +1
Query: 397 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 576
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 577 TTSGLN------------------------VLRIINEPTAAAIAYG 642
T +GL+ VLRIINEPTAAAIAYG
Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYG 107
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/84 (39%), Positives = 50/84 (59%)
Frame = +1
Query: 391 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 570
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 571 AGTTSGLNVLRIINEPTAAAIAYG 642
A GLNVL+I+N TA A+ YG
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYG 150
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 58.0 bits (134), Expect = 9e-09
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 674 VLIFDLGGGXFDVSILTIEDGIFEVXSTAGDXXLGGXXFXNRXVXXFXXEF 826
+ ++DLGGG FD+SIL I+ G+FEV +T GD LGG F N + EF
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEF 52
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 160 GKVEIIANDQGNRTTPSYVAFTDTERLI 243
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +2
Query: 665 ERNVLIFDLGGGXFDVSILTIEDGIFEVXSTAGDXXLGGXXF 790
+ VL++ LGG DV++L++ +G+++V +T D LGG F
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNF 194
>SB_43628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 31.1 bits (67), Expect = 1.1
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Frame = -2
Query: 530 GTVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCF 351
G +T + + R V +FV ++ L+ G VLS P+ T+ L+ S
Sbjct: 41 GNSLTLYIVLSNRRLRTVPNLFVVSLALSDLGMGVLSMPMCITV-------LSVSGWPFG 93
Query: 350 MSACTVASSNLRPMRRLASNIVLLGFIATWFLAASP--MRRSVSVNAT*DGVVLLPWSLA 177
SAC M ++ + L + +F P R+ ++ AT +L W LA
Sbjct: 94 DSACQYNGFIAVTMGVSSTQTLALTSVNRYFKVVKPSLYRKYFTMRAT-IICILSSWFLA 152
Query: 176 MISTFPXLEDTNARVXWYPDRFL 108
++T P L + +R+ ++P +++
Sbjct: 153 TLATIPYLA-SGSRMIFHPGKYV 174
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 169 EIIANDQGNRTTPSYVAFT-DTERL 240
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 177 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 347
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 295 RILCCWGSSPPGSWRH 248
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_13309| Best HMM Match : EGF (HMM E-Value=0)
Length = 718
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Frame = -1
Query: 582 GGTCIFCGLSLRVIEVRGN-RDNCILHSFAKISF-------GSFLHFRKHHGTDFLGEKG 427
GG C G S+ V + G+ RD+ + H A S+ GSF HGT + G KG
Sbjct: 193 GGWCSHSGSSIYVGDFNGDKRDDLMCHDTAGKSWVMLAQAGGSFSGSSSWHGTGWCGHKG 252
Query: 426 FVF 418
F
Sbjct: 253 SQF 255
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 295 RILCCWGSSPPGSWRH 248
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 680 IFDLGGGXFDVSILTIEDGIFEV 748
+FDLG G ++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = -1
Query: 699 PPPRSKISTFRSPVPFLSRPVSNRSS----SRFIDDSENVQA 586
P P+S + RSP+PFLS V+ R S R + + E V+A
Sbjct: 84 PSPQSYKPSLRSPMPFLSPDVNKRLSFNVRKRSVLEQEEVEA 125
>SB_14570| Best HMM Match : Mab-21 (HMM E-Value=0.00069)
Length = 639
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 236 RSVSVNAT*DGVVLLPWSLAMISTFPXLEDTNARVXWYPDRFLLRVLL 93
R + + +G + + LA P ED N +V W PDR L++ ++
Sbjct: 34 RDLDTGSLTEGFCIPRFFLAKSDKDPFGEDPNEKVYWQPDRDLMKEVI 81
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 35 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 121
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -2
Query: 485 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 306
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 305 RLASNIVL 282
++++ VL
Sbjct: 1166 KISNATVL 1173
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,259,895
Number of Sequences: 59808
Number of extensions: 529000
Number of successful extensions: 1474
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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