Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O15
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     26   0.33 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   1.00 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   4.0  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   4.0  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   9.3  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +2

Query: 263 CYNVNRQYQVVSNGSDKGHKIPNRIPMRDENDCDTRAYIKD 385
           C+  N  Y+V+ NG++    +   + + ++N C  R  +KD
Sbjct: 12  CFERNLSYKVMYNGNNNVTDLVEYVLLNEDNPC-ARKCVKD 51


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 615  TWFSSTSNFLWICWSSTCRPGTTT 686
            TW+SST+   W  W++T    TTT
Sbjct: 1041 TWWSSTTTSPW--WTTTTTRRTTT 1062



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +3

Query: 648 ICWSSTCRPGTTT 686
           +CW S C+ G ++
Sbjct: 760 VCWQSNCKKGASS 772


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 294 SATGPTRVTRSPTGSRCATRTTATP 368
           + T PT+V  S      A R+ ATP
Sbjct: 197 TTTSPTKVKASKASPAAAPRSVATP 221


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +2

Query: 203 VDYWGEGSIVNGGLYSGFRDCYNVNRQYQVVSNGSDKGHKIPNRIPMRDENDCDTRAYIK 382
           V Y GE   + G   +G     N    +   SN +  G +  N IP+  +      AY++
Sbjct: 100 VAYPGELLAILGSSGAGKTTLLNT-LTFHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQ 158

Query: 383 DDSVKIVTL 409
            D + I TL
Sbjct: 159 QDDLFIGTL 167


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +2

Query: 203 VDYWGEGSIVNGGLYSGFRDCYNVNRQYQVVSNGSDKGHKIPNRIPMRDENDCDTRAYIK 382
           V Y GE   + G   +G     N    +   SN +  G +  N IP+  +      AY++
Sbjct: 100 VAYPGELLAILGSSGAGKTTLLNT-LTFHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQ 158

Query: 383 DDSVKIVTL 409
            D + I TL
Sbjct: 159 QDDLFIGTL 167


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 168 SSLYCAVYGSSEYG 127
           +SLY A YG SE G
Sbjct: 277 TSLYAATYGGSEAG 290


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 168 SSLYCAVYGSSEYG 127
           +SLY A YG SE G
Sbjct: 277 TSLYAATYGGSEAG 290


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 246 YNPPLTILPSPQ*STCSISSPVMGS 172
           +N    ++PSP  S   +SSP  GS
Sbjct: 79  HNDGTQLMPSPTVSGSEMSSPGAGS 103


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 246 YNPPLTILPSPQ*STCSISSPVMGS 172
           +N    ++PSP  S   +SSP  GS
Sbjct: 79  HNDGTQLMPSPTVSGSEMSSPGAGS 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,106
Number of Sequences: 336
Number of extensions: 3494
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)