Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O15
         (848 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0727 - 10742899-10744375,10744470-10744933,10745412-10745477     29   4.7  
04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348     29   6.2  
01_01_0653 - 4981517-4981738,4981841-4981976,4982066-4982121,498...    29   6.2  

>03_02_0727 - 10742899-10744375,10744470-10744933,10745412-10745477
          Length = 668

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -1

Query: 677 PRSTRT*PADPQEVAC*GKPRASPSL*VP-VSNRTARSRDSTAEA 546
           PR T + P   + +A   KP+A P+  VP + +R A +  +TA+A
Sbjct: 551 PRQTESAPCAKRSMASKAKPKAKPAATVPSMMSRKAATTTTTAKA 595


>04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348
          Length = 662

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 632 KQLLVDLLVKYVSTGDYDKAVTTTKXLKDDNV-GFVIEELI 751
           K+LLV ++ +Y STGD + A +  + L  D    + I++LI
Sbjct: 87  KRLLVPVIEEYFSTGDVELAASELRSLGSDQFHSYFIKKLI 127


>01_01_0653 -
           4981517-4981738,4981841-4981976,4982066-4982121,
           4982228-4982284,4982373-4982450,4982533-4982619,
           4982707-4982767,4982862-4982950,4983048-4983145,
           4983242-4983341,4983983-4984042
          Length = 347

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 757 SVDQLLDNKTDVIIFQXLRGSHCLVVVPGRHVL 659
           SVD+L+D   DV+ F  L    CL V  G ++L
Sbjct: 100 SVDELVDQVADVLDFFGLGSVMCLGVTAGAYIL 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,150,411
Number of Sequences: 37544
Number of extensions: 422743
Number of successful extensions: 1196
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)