BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O15 (848 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_0727 - 10742899-10744375,10744470-10744933,10745412-10745477 29 4.7 04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348 29 6.2 01_01_0653 - 4981517-4981738,4981841-4981976,4982066-4982121,498... 29 6.2 >03_02_0727 - 10742899-10744375,10744470-10744933,10745412-10745477 Length = 668 Score = 29.1 bits (62), Expect = 4.7 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = -1 Query: 677 PRSTRT*PADPQEVAC*GKPRASPSL*VP-VSNRTARSRDSTAEA 546 PR T + P + +A KP+A P+ VP + +R A + +TA+A Sbjct: 551 PRQTESAPCAKRSMASKAKPKAKPAATVPSMMSRKAATTTTTAKA 595 >04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348 Length = 662 Score = 28.7 bits (61), Expect = 6.2 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +2 Query: 632 KQLLVDLLVKYVSTGDYDKAVTTTKXLKDDNV-GFVIEELI 751 K+LLV ++ +Y STGD + A + + L D + I++LI Sbjct: 87 KRLLVPVIEEYFSTGDVELAASELRSLGSDQFHSYFIKKLI 127 >01_01_0653 - 4981517-4981738,4981841-4981976,4982066-4982121, 4982228-4982284,4982373-4982450,4982533-4982619, 4982707-4982767,4982862-4982950,4983048-4983145, 4983242-4983341,4983983-4984042 Length = 347 Score = 28.7 bits (61), Expect = 6.2 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -2 Query: 757 SVDQLLDNKTDVIIFQXLRGSHCLVVVPGRHVL 659 SVD+L+D DV+ F L CL V G ++L Sbjct: 100 SVDELVDQVADVLDFFGLGSVMCLGVTAGAYIL 132 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,150,411 Number of Sequences: 37544 Number of extensions: 422743 Number of successful extensions: 1196 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1196 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2362209084 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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