BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O15 (848 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ926083-1|ABI50612.1| 130|Homo sapiens immunoglobulin heavy ch... 32 2.3 DQ005303-1|AAY26952.1| 132|Homo sapiens AF4 non-allergic immuno... 31 4.0 DQ535044-1|ABG38424.1| 120|Homo sapiens immunglobulin heavy cha... 31 5.3 DQ524090-1|ABI35602.1| 120|Homo sapiens immunoglobulin heavy ch... 31 5.3 AY607399-1|AAT02014.1| 114|Homo sapiens non-productive immunogl... 31 5.3 Z37327-1|CAA85579.1| 130|Homo sapiens Immunoglobulin heavy chai... 30 9.2 Z11946-1|CAA78003.1| 124|Homo sapiens immunoglobulin variable r... 30 9.2 >DQ926083-1|ABI50612.1| 130|Homo sapiens immunoglobulin heavy chain variable region protein. Length = 130 Score = 32.3 bits (70), Expect = 2.3 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = +2 Query: 149 TAQYKLLKLPITGEL-IEHVDYWGEGSIV 232 T+ Y + P+ GE E VDYWG+G++V Sbjct: 92 TSMYYCTRFPLAGEFSAELVDYWGQGTLV 120 >DQ005303-1|AAY26952.1| 132|Homo sapiens AF4 non-allergic immunoglobulin epsilon heavy chain variable region protein. Length = 132 Score = 31.5 bits (68), Expect = 4.0 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 149 TAQYKLLKLPITGELIEHVDYWGEGSIVNG 238 TA Y K P L ++ DYWG+G++V G Sbjct: 91 TAVYYCAKSPEHYPLADYFDYWGQGTLVTG 120 >DQ535044-1|ABG38424.1| 120|Homo sapiens immunglobulin heavy chain variable region protein. Length = 120 Score = 31.1 bits (67), Expect = 5.3 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +2 Query: 149 TAQYKLLKLPITGELIEHVDYWGEGSIV 232 TA Y ++P ++ H DYWG+G++V Sbjct: 92 TAVYYCARIPPMIVVVRHFDYWGQGTLV 119 >DQ524090-1|ABI35602.1| 120|Homo sapiens immunoglobulin heavy chain variable region protein. Length = 120 Score = 31.1 bits (67), Expect = 5.3 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 149 TAQYKLLKLPITGELIEHVDYWGEGSIV 232 TA Y +L GEL+ DYWG+G++V Sbjct: 89 TAVYYCARLLWFGELLHTFDYWGQGTLV 116 >AY607399-1|AAT02014.1| 114|Homo sapiens non-productive immunoglobulin heavy chain CDR3 protein. Length = 114 Score = 31.1 bits (67), Expect = 5.3 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%) Frame = +2 Query: 149 TAQYKLLKLPITGELIE--HVDYWGEGSIV 232 TA Y P GEL+E + DYWG+G++V Sbjct: 81 TAVYYCASAPWIGELLERYYFDYWGQGTLV 110 >Z37327-1|CAA85579.1| 130|Homo sapiens Immunoglobulin heavy chain variable region protein. Length = 130 Score = 30.3 bits (65), Expect = 9.2 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +2 Query: 149 TAQYKLLKLPITGELIEHVDYWGEGSIV 232 TA Y + + G L+ + DYWG+G++V Sbjct: 91 TAVYYCARALLRGPLVYYFDYWGQGTLV 118 >Z11946-1|CAA78003.1| 124|Homo sapiens immunoglobulin variable region protein. Length = 124 Score = 30.3 bits (65), Expect = 9.2 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = +2 Query: 170 KLPITGELIEHVDYWGEGSIV 232 ++ I G +I H DYWG+G++V Sbjct: 100 RIAIFGVVIPHFDYWGQGTLV 120 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 111,701,299 Number of Sequences: 237096 Number of extensions: 2281893 Number of successful extensions: 11206 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 10573 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11206 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10761200974 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -