BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O14 (826 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 42 8e-05 SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 34 0.028 SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 31 0.20 SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.61 SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces... 27 4.3 SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 7.5 SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple ca... 26 7.5 SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyc... 26 7.5 SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 26 7.5 SPCC290.02 |rpc34||DNA-directed RNA polymerase III complex subun... 26 7.5 SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 25 9.9 SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 25 9.9 SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces pombe... 25 9.9 SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 25 9.9 SPAC27F1.08 |pdt1||Nramp family manganese ion transporter|Schizo... 25 9.9 >SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 579 Score = 42.3 bits (95), Expect = 8e-05 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Frame = +2 Query: 572 VPTYEVLDKR-DTLDEFKILFNKIKKIGIRVIVDLIPNYVFTNHTWFVQSENS-TEPYTD 745 V Y+ +D R TL++ L + + +++++DL+ N+ H WF +S +S T P D Sbjct: 73 VSDYKQIDSRYGTLEDLDRLMKALHERDMKLVMDLVLNHTSDQHEWFKESRSSKTNPKRD 132 Query: 746 YFIW 757 ++ W Sbjct: 133 WYFW 136 >SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1098 Score = 33.9 bits (74), Expect = 0.028 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +2 Query: 656 RVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFIWTKE 766 R I+D++ NY+F+ + V E E YTD+F KE Sbjct: 456 RAILDILNNYIFSCPLFLVTPEELEEQYTDFFKKLKE 492 >SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 670 Score = 31.1 bits (67), Expect = 0.20 Identities = 28/89 (31%), Positives = 37/89 (41%) Frame = -2 Query: 480 PTRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSS 301 PT PSS S T+TA S T T + T SS Y+S SS Sbjct: 464 PTSAPSSVSSFTSSNSSY-TTTLTA-------SNTTVTFTGTGTGSATATSSSPYYSNSS 515 Query: 300 LVIPVNCRLLASSSIFASPFLWSPTTYFA 214 +++P S S F+S SPT+ F+ Sbjct: 516 IIVPTTVSTSGSVSSFSSS--PSPTSSFS 542 >SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 317 Score = 29.5 bits (63), Expect = 0.61 Identities = 15/58 (25%), Positives = 31/58 (53%) Frame = -2 Query: 477 TRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTS 304 TR SSY + S + + ++ +P+S S+++ ++ +S + K SS+ S+S Sbjct: 139 TRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSS 196 Score = 25.4 bits (53), Expect = 9.9 Identities = 21/77 (27%), Positives = 37/77 (48%) Frame = -2 Query: 429 LGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVNCRLLASSSIFA 250 L A + I+ +S+ T ++T+ + SS+YF TSS P + +SSS + Sbjct: 108 LQACSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSS 167 Query: 249 SPFLWSPTTYFASDMST 199 S S ++ +S S+ Sbjct: 168 SSSKSSSSSKSSSSSSS 184 >SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 279 Score = 26.6 bits (56), Expect = 4.3 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -3 Query: 608 VCHVCRALRKSALGRTRPE 552 VC +C +L K+A+GR RP+ Sbjct: 102 VCGLCVSLLKNAVGRPRPD 120 >SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 463 Score = 25.8 bits (54), Expect = 7.5 Identities = 13/53 (24%), Positives = 22/53 (41%) Frame = -2 Query: 450 LGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVI 292 +G+G P + A+ P + S +T N+T S T ST + + Sbjct: 150 VGNGNPSCVGIAVLAVLPQPISSSSTYNSTTSSYHNSTSTPPPTITSTKASTV 202 >SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple cancers-1 homolog 2|Schizosaccharomyces pombe|chr 2|||Manual Length = 676 Score = 25.8 bits (54), Expect = 7.5 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Frame = +2 Query: 581 YEVLDKRDTLDEFKILFNKIKKIGIRVIVDLIPNYVFTNHTWFV----QSENSTEPYTDY 748 Y+ +D+ D I+ K I IRVI + + WF+ Q NS + Y+ + Sbjct: 217 YDSIDELDFSVLNSIVSLDAKDIYIRVICSFVNTGFIDSTNWFLNSFNQRRNSLQLYSSW 276 Query: 749 FI 754 FI Sbjct: 277 FI 278 >SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyces pombe|chr 1|||Manual Length = 517 Score = 25.8 bits (54), Expect = 7.5 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +2 Query: 362 VLFWVAWLCMLAGAIAVI 415 VL W AWLC +G + + Sbjct: 278 VLIWFAWLCFNSGTLLTV 295 >SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosaccharomyces pombe|chr 2|||Manual Length = 2609 Score = 25.8 bits (54), Expect = 7.5 Identities = 15/62 (24%), Positives = 29/62 (46%) Frame = -2 Query: 438 GPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVNCRLLASSS 259 GP +G+R + + + + T + + +QK S +Y + SL +P LL ++ Sbjct: 523 GPSIGSRNQSTPSTLAPNVAETDALVSENTGAASQKTSKSYKTNDSLKVPPLVPLLIGTT 582 Query: 258 IF 253 F Sbjct: 583 RF 584 >SPCC290.02 |rpc34||DNA-directed RNA polymerase III complex subunit Rpc34|Schizosaccharomyces pombe|chr 3|||Manual Length = 301 Score = 25.8 bits (54), Expect = 7.5 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +2 Query: 590 LDKRDTLDEFKILFNKIKKIGIRVIVDLIPNYVFTNHTWFVQSENSTE 733 L+ ++ + K + N +KI ++ DL+P+ T WF E E Sbjct: 125 LESKNLVKSIKSVKNPTRKI--YMLYDLVPSTELTGGPWFTDQELDVE 170 >SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1666 Score = 25.4 bits (53), Expect = 9.9 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Frame = -1 Query: 700 MVGEHVVRYQINNHSYSDLLNFVKQNFEFVQCVTFVEHF----VSRHLDEHAL 554 MV + Q NH+Y+DLL ++ + +HF ++R L++H+L Sbjct: 1447 MVAIQHLNIQAVNHAYNDLLIEMEDYQSLQDSIENYDHFDAIALARRLEKHSL 1499 >SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 817 Score = 25.4 bits (53), Expect = 9.9 Identities = 10/32 (31%), Positives = 17/32 (53%) Frame = +2 Query: 272 NKRQFTGMTREEVLKYADDPFWVNLRWSLFVL 367 N G+TREE+ YA+ + WS++ + Sbjct: 318 NNNPDDGLTREEMAPYAERVLVYPVNWSVYTM 349 >SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces pombe|chr 2|||Manual Length = 377 Score = 25.4 bits (53), Expect = 9.9 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%) Frame = +3 Query: 459 TNSVPWSDW-TWSMPSNHKIYNRIW 530 T+S+P D W PS ++YN +W Sbjct: 210 TSSIPKVDGKNWEYPSPQQMYNAMW 234 >SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 343 Score = 25.4 bits (53), Expect = 9.9 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = -1 Query: 487 VQSDQGTEFVPCPGFGRAALGC-AYNDCNSPGEHAQPGHPE 368 VQS QG P PG ++ YND NS G H+ E Sbjct: 247 VQSVQGRPLAPIPGRRPLSISSDLYNDSNS-GSHSNDDSDE 286 >SPAC27F1.08 |pdt1||Nramp family manganese ion transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 521 Score = 25.4 bits (53), Expect = 9.9 Identities = 12/47 (25%), Positives = 23/47 (48%) Frame = +2 Query: 278 RQFTGMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIV 418 R + T EE + + +L W++ ++ W WL + A + +IV Sbjct: 467 RVVSDSTNEETGQLIRETHDYSLGWTMTIVTWAIWLFLTALNLLLIV 513 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,090,065 Number of Sequences: 5004 Number of extensions: 64462 Number of successful extensions: 224 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 213 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 222 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 404442380 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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