Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O13
(825 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 142 2e-34
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 122 5e-28
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 56 5e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 54 1e-07
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 52 6e-07
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 44 2e-04
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 42 5e-04
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 42 5e-04
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 42 6e-04
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_50778| Best HMM Match : PA14 (HMM E-Value=0.00025) 30 2.0
SB_55017| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_30585| Best HMM Match : Myotub-related (HMM E-Value=2.9e-17) 29 3.5
SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 142 bits (345), Expect = 2e-34
Identities = 81/200 (40%), Positives = 117/200 (58%), Gaps = 4/200 (2%)
Frame = +1
Query: 160 DKNA-RDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDN 336
+KN R+ A A+ N G G+QIWRI+ F+ +++D G FY GDSYIIL T ++
Sbjct: 455 EKNVKREAAATEIAWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKES 514
Query: 337 -RNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQT 513
+ L +D+H+WIG++STQDE G AA TV LD +QHRE G ES LF SYF++
Sbjct: 515 GEDELKYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKPIQHREVQGFESKLFKSYFKS 574
Query: 514 PLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGK--RDVRVRQVDPXIASMNKGDVFVLDLX 687
L L+GG SGF HV + R+ +V+G + V +V +S+ DVF+LD
Sbjct: 575 -LTILKGGVDSGFRHVKPQE-YKPRLLRVRGTTVSNCVVEEVLLARSSLCSEDVFILDKG 632
Query: 688 NDIYVFVGXKAKNVEXLKAI 747
++Y++VG K E + +
Sbjct: 633 LNLYLWVGVKCDKDEKFRGM 652
Score = 80.6 bits (190), Expect = 1e-15
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 8/160 (5%)
Frame = +1
Query: 265 VAQKDIGKFYKGDSYIILRTTSD-NRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKF 441
V + D GKFY GDSYIIL T D + L +D+H+WIG++STQDE G AA TV LD
Sbjct: 880 VLRDDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELDIYP 939
Query: 442 GGAAVQH----RETMGHESALFLSYFQTPLNYLEGGNPSGFNHV---VTNAGAQKRMFQV 600
V+ R+++ + L +T + G+ F V V++A Q ++ ++
Sbjct: 940 KSVKVEEVPFVRKSLNSDDVFILDKGKT---IYQKGDYDDFEPVLLRVSDASGQMKLTEM 996
Query: 601 KGKRDVRVRQVDPXIASMNKGDVFVLDLXNDIYVFVGXKA 720
K K R+ + D ++ DVF+ D N ++V+ G KA
Sbjct: 997 K-KGKGRITRND-----FDEKDVFLFDTGNVLFVYSGNKA 1030
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 122 bits (293), Expect = 5e-28
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Frame = +1
Query: 145 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 324
++ ++ + + A+ A+ N G G+QIWRI F+ ++ G+FY GDSYIIL T
Sbjct: 496 LSEVTHEVKKSAAEGEVAWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWT 555
Query: 325 TSDNRNN--LSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFL 498
+ + L +D+H+WIGR STQDE G AA TV LD VQHRE M HES +F
Sbjct: 556 YEEKEDTEKLCYDLHFWIGRGSTQDEYGTAAYKTVELDTYLNDVPVQHREIMNHESDMFK 615
Query: 499 SYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRD 615
+YF++ + YL+GG +GFN V + R+ +V G ++
Sbjct: 616 TYFKS-ITYLKGGAETGFNQVKPKE-YKPRILKVSGDKN 652
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 55.6 bits (128), Expect = 5e-08
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 211 GRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQ 390
GR+ V +R+ + + G F+ GDSY+++ T R I++W G +S
Sbjct: 155 GRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDSRV 214
Query: 391 DESGAAAILTVGLD-DKFGGAAVQ 459
E GAAA LTV LD + FGG AVQ
Sbjct: 215 FEKGAAAKLTVDLDNNNFGGDAVQ 238
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 160 DKNAR-DKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 324
+KN + + A+ PA+ G+ GVQ+WRI F+ ++D G FY GDSYI+L T
Sbjct: 347 EKNVKKESAEGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 52.0 bits (119), Expect = 6e-07
Identities = 39/134 (29%), Positives = 61/134 (45%)
Frame = +1
Query: 316 LRTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALF 495
L+T D + L W I+YWIG+E++ RE G ES F
Sbjct: 260 LKTELDETDQLFWQIYYWIGKEAS-------------------------REEQGDESEEF 294
Query: 496 LSYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPXIASMNKGDVFV 675
F + Y+EGG SGF + V + R+F++ + V + V P ++S++ F+
Sbjct: 295 HELFDNDIAYIEGGTASGF-YSVEDQIYITRLFRLLKDKRVLLEPVLPDVSSLDPTFTFI 353
Query: 676 LDLXNDIYVFVGXK 717
LD IY++ G K
Sbjct: 354 LDAGLKIYIWSGAK 367
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 48.0 bits (109), Expect = 9e-06
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Frame = +1
Query: 187 VHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT----TSDNRNNL-- 348
V AF G+ G++IWRI+ + + K G FY GDSYI L S N+ ++
Sbjct: 3 VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICLSVELHYKSLNKGDVFI 62
Query: 349 ---SWDIHYWIGRESTQDESGAAAILTVGL-DDKFGGAAVQHRETMGHESALFLSYFQTP 516
+I+ W G + ++ E + + D++ GG A H + L +F
Sbjct: 63 LDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIIDECKDKGLESKFFDAL 122
Query: 517 LNYLEGGNPSGFNHVV---TNAGAQKRMFQVKGKRDVRVRQVDPXIAS-MNKGDVFVLDL 684
+ E G + A + M G+ ++R + P S ++ D F+LD
Sbjct: 123 GSRGEIAEDLGTTRSLRKPARAPSLSTMSDASGELEMREIEAKPLKKSNLDTNDCFILDC 182
Query: 685 XND-IYVFVG 711
+ ++V+VG
Sbjct: 183 GSSGVFVWVG 192
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 649 SMNKGDVFVLDLXNDIYVFVGXKAKNVEXLKAI 747
S+NKGDVF+LD +IY + G + VE +K I
Sbjct: 54 SLNKGDVFILDDGLNIYCWNGSQCSRVERMKGI 86
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 289 FYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDK-FGGAAVQHR 465
FY GDSY+IL D N +H G+ ++ DE AA + +DD+ FGG A Q
Sbjct: 677 FYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAIAIDDEYFGGKAKQTV 736
Query: 466 ETMGHESALF 495
+ E F
Sbjct: 737 QVCCREKVQF 746
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 42.3 bits (95), Expect = 5e-04
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Frame = +1
Query: 205 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL--------RTTSDNRNNLSWDI 360
N+ T GV +W I + + ++ G F+ G+ Y+I R +D ++ +
Sbjct: 214 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 273
Query: 361 --------HYWIGRESTQDESGAAAILTVGLDDKFG 444
+W G + T +E GAAA++ V LD++ G
Sbjct: 274 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 309
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 42.3 bits (95), Expect = 5e-04
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Frame = +1
Query: 205 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL--------RTTSDNRNNLSWDI 360
N+ T GV +W I + + ++ G F+ G+ Y+I R +D ++ +
Sbjct: 1769 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 1828
Query: 361 --------HYWIGRESTQDESGAAAILTVGLDDKFG 444
+W G + T +E GAAA++ V LD++ G
Sbjct: 1829 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 1864
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 604 GKRDVRVRQVDPXIASMNKGDVFVLDLXNDIYVFVGXKAKNVEXLK 741
G+R+++ R ++P S N GD +VL ++++ +VG A +E K
Sbjct: 1457 GRRNIQTRLIEPCQKSFNSGDCYVLVTKDELFAWVGKHANAIERAK 1502
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 355 DIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQT 513
++H+W+G E + +E AA V L K G VQ+RE G+E+ F FQ+
Sbjct: 22 NLHFWVGSECSAEEYCTAAYKAVELFVKLEGKPVQYREAEGYETEEFRKCFQS 74
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 364 YWIGRESTQDESGAAAILTVGLDDKFG-GAAVQHRETMGHESALFLSY 504
+W G +ST +E GAAA++TV +D + G +H T+ + F Y
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIY 244
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 364 YWIGRESTQDESGAAAILTVGLDDKFG 444
+W G +ST +E GAAA++TV +D + G
Sbjct: 37 FWQGHDSTVNEKGAAALMTVEIDSEKG 63
>SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 457 QHRETMGHESALFLSYFQTPLNYLEGGNPSGFN---HVVTNAGAQKRMFQVKGKRDVRVR 627
Q R E FL F+ L LEGG +GF T KRMF VKG D+ +
Sbjct: 38 QVRVVQYKEPEHFLRIFRGRLIILEGGKGAGFRAGCEEDTYDHEGKRMFHVKGTTDLNAK 97
Query: 628 QV 633
+
Sbjct: 98 AI 99
>SB_50778| Best HMM Match : PA14 (HMM E-Value=0.00025)
Length = 1266
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 452 RSSTERPWVTKALCSYHISRHP*TIWREGIRPVLTTSSRTREPRNECSRSRGSEMSALDK 631
R + +P+V++ +P T+ GIRP+L +S+ PR + R+ G+ S D
Sbjct: 295 RPTENQPYVSRGPLEIQ-PHNPTTMQNAGIRPMLASSAGIALPRKQQKRNTGAPDSCGDA 353
Query: 632 S 634
S
Sbjct: 354 S 354
>SB_55017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 379 PDRSSSGCPMTDCCDCPRSSVK*CMNLLCR--IFLCPSEQRVL 257
PD+ ++ P T C DCP M ++ R IF C E +VL
Sbjct: 57 PDKRTNTLPFTHCYDCPLIITSVYMGIMGRRGIFQCMLEVQVL 99
>SB_30585| Best HMM Match : Myotub-related (HMM E-Value=2.9e-17)
Length = 488
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 580 QKRMFQVKGKRDVRVRQVDPXIASMNKGDVFVLDLXNDI 696
+KR + VKG DVR R P S+ D V+DL NDI
Sbjct: 88 RKRRYHVKGSNDVRKRSGSPS-GSITTDDESVVDL-NDI 124
>SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +1
Query: 232 IWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRN--NLSWDIHY--WIGR 378
IWR+Q Q +IG + ++ SD R +LSW H+ W+ R
Sbjct: 160 IWRLQRARNSDSCQSEIGVNFNSRPQLVTNEKSDTRTCLSLSWLSHFSRWLPR 212
>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 242 YRTSNQYPLLRRT*ENSTKEIHTSFYGRPRTIATICHGTSTTGSV 376
Y N L++ + S KE++ F +P A +C G +T GSV
Sbjct: 150 YAEHNADTLVKYSLSPSAKELYFKF-SKPNEDAPLCQGAATAGSV 193
>SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 173 VTKLRSTRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEI 304
+T + RLL +A +P+ K R++N+Y ++ +N K I
Sbjct: 129 ITSTKEERLLVSTASKPIVKLSYNRSNNKYSYTGQSDDNLLKNI 172
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,947,213
Number of Sequences: 59808
Number of extensions: 516070
Number of successful extensions: 1420
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2311562737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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