Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O12
(839 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 109 8e-23
UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera... 71 4e-11
UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetic... 49 1e-04
UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1... 49 2e-04
UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetic... 48 2e-04
UniRef50_UPI00015B460B Cluster: PREDICTED: similar to Putative 1... 46 0.001
UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-direct... 45 0.002
UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|R... 44 0.004
UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetic... 42 0.025
UniRef50_UPI00015B47DE Cluster: PREDICTED: similar to has homolo... 41 0.045
UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetic... 40 0.059
UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles g... 40 0.10
UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles g... 39 0.14
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 38 0.24
UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1 retr... 38 0.31
UniRef50_UPI00005A02EC Cluster: PREDICTED: hypothetical protein ... 37 0.72
UniRef50_UPI00015B47FC Cluster: PREDICTED: similar to non-LTR re... 36 1.3
UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles g... 36 1.3
UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 36 1.7
UniRef50_Q03272 Cluster: Retrovirus-related Pol polyprotein from... 36 1.7
UniRef50_A0VI04 Cluster: Putative uncharacterized protein; n=1; ... 35 2.9
UniRef50_Q0UJP4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 35 2.9
UniRef50_UPI0000EBE020 Cluster: PREDICTED: similar to coiled-coi... 34 3.9
UniRef50_UPI0000E1FA77 Cluster: PREDICTED: hypothetical protein;... 34 3.9
UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles g... 34 3.9
UniRef50_Q3SF04 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_A3Q0V1 Cluster: Putative esterase; n=5; Mycobacterium|R... 33 6.8
UniRef50_Q5N7A6 Cluster: Epstein-Barr virus EBNA-1-like protein;... 33 6.8
UniRef50_Q7NXK3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_Q1R069 Cluster: Twin-arginine translocation pathway sig... 33 8.9
UniRef50_A7CFA3 Cluster: Putative uncharacterized protein precur... 33 8.9
UniRef50_A5P062 Cluster: Putative uncharacterized protein; n=2; ... 33 8.9
UniRef50_A4RQ84 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_A1CQX4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from... 33 8.9
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep:
Reverse transcriptase - Bombyx mori (Silk moth)
Length = 1076
Score = 109 bits (262), Expect = 8e-23
Identities = 53/94 (56%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Frame = +1
Query: 277 PYGATPXTRQNVAA-LRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYR 453
P A P R +A LRRPQR +A++ IRGYRTVSFEAAC+LAG PPW+LEAE+LAADYR
Sbjct: 824 PVWAEPRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLAGTPPWELEAESLAADYR 883
Query: 454 WRXDLXXXXXXXXXXXXXXXXXLQSRRSVLEAWS 555
WR +L SRRSVLE+WS
Sbjct: 884 WRSELRARGVARVPESELRARKAHSRRSVLESWS 917
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +3
Query: 162 LMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284
LM TAGSLSRLLPN+GGPDQV RRLY GVVRSMALYGAPVW
Sbjct: 786 LMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYGAPVW 826
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +2
Query: 65 RSGVGVTGLRYLGLKLDGRWNFRAHFEKLGPRADG 169
R GVGV L+YLGL LD RW FRAHF +L PR G
Sbjct: 755 RIGVGVQ-LKYLGLVLDSRWAFRAHFAELVPRLMG 788
Score = 35.9 bits (79), Expect = 1.3
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 558 RLADPSAGLRTVXAVRPVLXDWV 626
RLA+P+ GLRTV AV PV DWV
Sbjct: 919 RLANPTWGLRTVEAVYPVFDDWV 941
>UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9;
Obtectomera|Rep: Reverse transcriptase - Papilio xuthus
Length = 1053
Score = 70.9 bits (166), Expect = 4e-11
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +1
Query: 319 LRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWR 459
L RPQR +A++ IRGYRTVS++AAC LAG+ PW LEAE LAA + WR
Sbjct: 816 LHRPQRTMAIRMIRGYRTVSYDAACTLAGSLPWVLEAEILAAIHTWR 862
Score = 66.5 bits (155), Expect = 8e-10
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +3
Query: 162 LMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296
LM TA +L LLPNVGGP RRL+ GVV+SMALYGAPVW AL
Sbjct: 764 LMRTAAALGSLLPNVGGPKAACRRLFTGVVQSMALYGAPVWSGAL 808
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +2
Query: 35 GAHLVIRRRPRSGVGV---TGLRYLGLKLDGRWNFRAHFEKLGPR 160
GAH+V+ GV + + +RYLGL LDGRW F HF +LGP+
Sbjct: 724 GAHIVV-----GGVNINIQSHIRYLGLMLDGRWTFEGHFRQLGPK 763
>UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 973
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 171 TAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296
T +LSR++PN+GGP R+L GV SM LYG VW AL
Sbjct: 726 TISALSRIMPNIGGPGSNRRKLLAGVATSMLLYGCEVWHTAL 767
Score = 37.1 bits (82), Expect = 0.55
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1
Query: 298 TRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAE 432
T++NV L R I + YRTVS EAA ++ G PP L E
Sbjct: 769 TKKNVVVLESTHRRILARVACAYRTVSTEAAQVITGVPPARLLVE 813
>UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1;
Drosophila melanogaster|Rep: Endonuclease/reverse
transcriptase - Drosophila melanogaster (Fruit fly)
Length = 989
Score = 48.8 bits (111), Expect = 2e-04
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +3
Query: 171 TAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284
TA +L+R++PNVGGP ARRL + V ++ LY AP+W
Sbjct: 744 TAAALARIMPNVGGPRLPARRLLVAVSKATLLYAAPIW 781
Score = 36.3 bits (80), Expect = 0.96
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 265 YTARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLE 426
Y A + + + + R R +A++ IRG+RT+S +AA L+G P DL+
Sbjct: 776 YAAPIWSCVSTKKTYLDSARAVSRTMALRLIRGFRTISDDAAHALSGITPIDLD 829
>UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Hypothetical 115 kDa protein in
type I retrotransposable element R1DM (ORF 2), partial -
Tribolium castaneum
Length = 2033
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 141 LRSWALVLMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296
++ A+ + T +LS ++PN+GGP RR+ V S LYGAP+W +A+
Sbjct: 1370 IQQTAIKVEKTITALSSVMPNIGGPSSSKRRMLSSVAHSAMLYGAPIWHNAM 1421
>UniRef50_UPI00015B460B Cluster: PREDICTED: similar to Putative 115
kDa protein in type-1 retrotransposable element R1DM
(Putative 115 kDa protein in type I retrotransposable
element R1DM) (ORF 2); n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Putative 115 kDa protein in type-1
retrotransposable element R1DM (Putative 115 kDa protein
in type I retrotransposable element R1DM) (ORF 2) -
Nasonia vitripennis
Length = 680
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = +1
Query: 319 LRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRXDL 468
L R QR + ++R RTVS EA ++AG+ PWDLE L+A Y+ R DL
Sbjct: 448 LNRCQRYVLYASVRVCRTVSTEAMQVIAGSLPWDLECLRLSALYKVRKDL 497
>UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 932
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +3
Query: 171 TAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284
T +LSRL+PN GG RR+ + V RS LYGA +W
Sbjct: 683 TMAALSRLMPNTGGAKPYRRRMLVAVARSQILYGAEIW 720
Score = 33.5 bits (73), Expect = 6.8
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 265 YTARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAE 432
Y A +G+ +++ L R QR ++ YRT S EA ++AG P L E
Sbjct: 715 YGAEIWGSRHLKSKSLEKLERAQRTALLRVTSAYRTTSNEALQVIAGTKPMALAIE 770
>UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|Rep:
Reverse transcriptase - Anopheles gambiae (African
malaria mosquito)
Length = 1049
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +3
Query: 162 LMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296
+M +L+ PN+GGP RRL+ S+ YGAPVW H L
Sbjct: 790 VMKAINALAAFTPNIGGPCSSIRRLHANCAISVLRYGAPVWAHIL 834
Score = 34.7 bits (76), Expect = 2.9
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +1
Query: 301 RQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYR 453
+Q+ + + R +A++ YRT+S+EA C++A P + E + ++R
Sbjct: 837 KQHQNTVNKVHRKLAMRVTSAYRTISYEAVCVIASMMPLCITLEEDSKNFR 887
>UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=6; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1057
Score = 41.5 bits (93), Expect = 0.025
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 174 AGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284
A L RL+PNV GP R++ VV S+ +Y AP+W
Sbjct: 672 AAMLGRLMPNVKGPSPSKRKVMAEVVNSIVMYAAPIW 708
>UniRef50_UPI00015B47DE Cluster: PREDICTED: similar to has homology
with reverse transcriptase; 5 end of coding region for
ORF2 undetermined; putative; n=3; Nasonia
vitripennis|Rep: PREDICTED: similar to has homology with
reverse transcriptase; 5 end of coding region for ORF2
undetermined; putative - Nasonia vitripennis
Length = 883
Score = 40.7 bits (91), Expect = 0.045
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +3
Query: 183 LSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296
LSRL+ NV GP RRL M S+ LYGA VW +
Sbjct: 168 LSRLMANVRGPRPTVRRLLMANTNSILLYGAEVWADVM 205
>UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=2; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1208
Score = 40.3 bits (90), Expect = 0.059
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 183 LSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284
L RL+PNV GP R++ VV S+ +Y AP+W
Sbjct: 744 LGRLMPNVKGPSPSKRKVMAEVVNSIVMYAAPIW 777
>UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 973
Score = 39.5 bits (88), Expect = 0.10
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 180 SLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296
SL +++PN+GGP RRL V S Y A +W H L
Sbjct: 735 SLIQIMPNIGGPKSSWRRLLADVAFSRLRYNAAIWAHVL 773
Score = 34.3 bits (75), Expect = 3.9
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 256 RWHYTARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPP 414
R Y A + ++N R R +A++ +R Y+T+S A C++A P
Sbjct: 761 RLRYNAAIWAHVLVLKENRQLANRVHRLLAMRVVRAYKTISHVAVCVIASMVP 813
>UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1009
Score = 39.1 bits (87), Expect = 0.14
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 180 SLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296
+L R++PN GP RR+ V + Y +P+WCH L
Sbjct: 739 TLVRMMPNKAGPSSNVRRVIALTVVAKVRYASPIWCHTL 777
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 38.3 bits (85), Expect = 0.24
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 310 VAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADY 450
+ L QR IA K + YRTVS +A +LAG P DL A+ Y
Sbjct: 1298 IKQLAAVQRGIAQKVCKAYRTVSLNSALILAGMLPLDLRVREAASLY 1344
>UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1
retrotransposable element R1DM; n=13; Drosophila|Rep:
Putative 115 kDa protein in type-1 retrotransposable
element R1DM - Drosophila melanogaster (Fruit fly)
Length = 1021
Score = 37.9 bits (84), Expect = 0.31
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 298 TRQNVAALRRP---QRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYR 453
T + VAA RR QR I + + RTVS A +L GAPP DL A+ LA Y+
Sbjct: 802 TAEQVAAQRRLASCQRLILLGCLSVCRTVSTVALQVLGGAPPLDLAAKLLAIKYK 856
>UniRef50_UPI00005A02EC Cluster: PREDICTED: hypothetical protein
XP_862750; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_862750 - Canis familiaris
Length = 273
Score = 36.7 bits (81), Expect = 0.72
Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = -1
Query: 257 RPHHPHVEAARHLIGTPDVWKEPAQRAGRCHQHEGPTSQSERGSSTDRPV*GRGTEDRSP 78
RP P + A L G P W A R R H+H Q+ ++T P E +
Sbjct: 31 RPPPPQIGARASLTGLPGHWLGSALRCQRRHRHHRCLEQAVSVTTTLPP----RPETSTA 86
Query: 77 RPLIADAS*SRGGH---PSGGARPGP 9
RPL D S S G P GG GP
Sbjct: 87 RPLRPDRSLSETGSDWPPGGGNHAGP 112
>UniRef50_UPI00015B47FC Cluster: PREDICTED: similar to non-LTR
retrotransposon R1Bmks ORF2 protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to non-LTR
retrotransposon R1Bmks ORF2 protein - Nasonia
vitripennis
Length = 986
Score = 35.9 bits (79), Expect = 1.3
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 271 ARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDL 423
AR G T Q+ QR I ++ + YRTVS +A C++A A P DL
Sbjct: 814 ARGGGDLVRTNQHRQTFLSIQRTILLRVTKAYRTVSGDALCVIARAIPLDL 864
>UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1173
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 165 MATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHA 293
+ TA +L L+ N GP RRL VV S+ Y APVW A
Sbjct: 776 LRTAKALGCLMRNHSGPKCAKRRLLASVVDSILRYAAPVWHEA 818
>UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1201
Score = 35.5 bits (78), Expect = 1.7
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 180 SLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHALXPPE 308
+++RL+PN+ GP RL V S Y APVW A+ E
Sbjct: 836 AVNRLMPNLHGPRTSMSRLLANVADSTMRYAAPVWHEAIGNQE 878
Score = 33.5 bits (73), Expect = 6.8
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 319 LRRPQRAIAVKAIRGYRTVSFEAACLLAGAPP 414
LRR QR A+ R +RTV +E A LLAG P
Sbjct: 883 LRRVQRKSAIGLARTFRTVRYETAVLLAGLLP 914
>UniRef50_Q03272 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 4
(Retrovirus-related Pol polyprotein from type I
retrotransposable element R1 4) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease]; n=1; Nasonia
vitripennis|Rep: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 4
(Retrovirus-related Pol polyprotein from type I
retrotransposable element R1 4) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease] - Nasonia
vitripennis (Parasitic wasp)
Length = 392
Score = 35.5 bits (78), Expect = 1.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 334 RAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWR 459
R I + R YR+ S+EAAC+LAG P ++ A Y R
Sbjct: 172 RQILIAITRCYRSTSYEAACVLAGTLPICIQLRVSVAKYHLR 213
>UniRef50_A0VI04 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 640
Score = 34.7 bits (76), Expect = 2.9
Identities = 38/119 (31%), Positives = 51/119 (42%)
Frame = -1
Query: 359 RIALTAIARCGRRSAATFWRVQGVAPYGRAV*CHRPHHPHVEAARHLIGTPDVWKEPAQR 180
R+ L +ARC AA R++G AP + C R H P + R GT + P R
Sbjct: 300 RVRLGPLARCEAAKAAGRGRLRGRAP---LLACPRAHAP---SGR---GTGQA-RVPHAR 349
Query: 179 AGRCHQHEGPTSQSERGSSTDRPV*GRGTEDRSPRPLIADAS*SRGGHPSGGARPGPCQ 3
G +H P S + RG + R RG DR +P A + R P G PC+
Sbjct: 350 CGLACRH--PLSGAGRGPAPHR----RGAADRWTQPGPAGHAPDRRDGPQPGRAQAPCR 402
>UniRef50_Q0UJP4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 485
Score = 34.7 bits (76), Expect = 2.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 7 HGPGRAPPDGCPPRDQEASAIRGRGDRSSVPRPQTGRSVELP 132
+GP PP P ++ RGRGDR P PQ ++ P
Sbjct: 10 YGPNNPPPPPMGPPPGKSGRARGRGDRGEPPHPQDSQTSSGP 51
>UniRef50_UPI0000EBE020 Cluster: PREDICTED: similar to coiled-coil
domain containing 66; n=1; Bos taurus|Rep: PREDICTED:
similar to coiled-coil domain containing 66 - Bos taurus
Length = 492
Score = 34.3 bits (75), Expect = 3.9
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 10 GPGRAPPDGCPPRDQEASAIRGRGDRSSVPRPQTGRSV-ELPRSL*EVGP 156
G GR P PP+ ++A + RGR + PRPQ RS L RSL GP
Sbjct: 238 GRGRRPRGRHPPQSRDARS-RGRSQTCAPPRPQPRRSARSLARSLALRGP 286
>UniRef50_UPI0000E1FA77 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 113
Score = 34.3 bits (75), Expect = 3.9
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = -3
Query: 543 QHGPPRLEPPRSNXSFAGAPFPPRAEVXTPPVIGSERLRLQVPGWRPGEQARRLEGDGA 367
+ G P PP A P PP PP +G R R +VP +AR G GA
Sbjct: 54 RRGAPSPPPPEPEPEPAHPPAPPPPPPEQPPSLGPRRRRGRVPAVAARARARAPAGGGA 112
>UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1248
Score = 34.3 bits (75), Expect = 3.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 183 LSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHA 293
++ ++ N GP RRL GV ++ YGAP+W A
Sbjct: 765 VTNVMRNHSGPRVAKRRLLAGVSEAIIRYGAPIWAEA 801
>UniRef50_Q3SF04 Cluster: Putative uncharacterized protein; n=1;
Thiobacillus denitrificans ATCC 25259|Rep: Putative
uncharacterized protein - Thiobacillus denitrificans
(strain ATCC 25259)
Length = 310
Score = 33.5 bits (73), Expect = 6.8
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = -1
Query: 242 HVEAARHLIGTPDVWKEPAQRAGRCHQHEGPTSQSERGSSTDRPV*GRGTEDRSPRPLIA 63
H +AA G D W++ AQ G Q G + G R G G +R P
Sbjct: 96 HDDAASWQSGAQDHWRQGAQERGGPGQ--GGYGELSYGQGGQRRGQGEGAYERGPEAFGQ 153
Query: 62 DAS*SRGGHPSGGARPG 12
SRGG+ G PG
Sbjct: 154 WQGGSRGGYGQPGHEPG 170
>UniRef50_A3Q0V1 Cluster: Putative esterase; n=5; Mycobacterium|Rep:
Putative esterase - Mycobacterium sp. (strain JLS)
Length = 450
Score = 33.5 bits (73), Expect = 6.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 93 GTSASNWTVGGTSALTLRSWALVLMATAGSLSR-LLPNVGGPDQVARRLYMGVVRSMALY 269
G W++GGT A+ L L +T ++ L PN G +Q RLY G + A Y
Sbjct: 291 GWGVVGWSMGGTCAVDLSVMHPELFSTFEDIAGDLTPNAGTKEQTIARLYGGNTAAWAAY 350
>UniRef50_Q5N7A6 Cluster: Epstein-Barr virus EBNA-1-like protein;
n=1; Oryza sativa (japonica cultivar-group)|Rep:
Epstein-Barr virus EBNA-1-like protein - Oryza sativa
subsp. japonica (Rice)
Length = 195
Score = 33.5 bits (73), Expect = 6.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 152 GPRADGNGRLFEPAPSKRRGSRSGGAPPLHGGGAVDG 262
GP D GR+ + +G R G PP H GG G
Sbjct: 46 GPNGDRGGRMTPAGGKREKGGRERGLPPCHFGGKGGG 82
>UniRef50_Q7NXK3 Cluster: Putative uncharacterized protein; n=1;
Chromobacterium violaceum|Rep: Putative uncharacterized
protein - Chromobacterium violaceum
Length = 132
Score = 33.1 bits (72), Expect = 8.9
Identities = 20/56 (35%), Positives = 22/56 (39%)
Frame = -1
Query: 194 EPAQRAGRCHQHEGPTSQSERGSSTDRPV*GRGTEDRSPRPLIADAS*SRGGHPSG 27
EP QR G GP SE+G + G G R AS S GG P G
Sbjct: 59 EPGQRPGTAAGRRGPPQLSEQGGDIRVQLVGGGAVGHGSRAGTGRASISDGGEPGG 114
>UniRef50_Q1R069 Cluster: Twin-arginine translocation pathway
signal; n=4; Gammaproteobacteria|Rep: Twin-arginine
translocation pathway signal - Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 227
Score = 33.1 bits (72), Expect = 8.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 519 PPRSNXSFAGAPFPPRAEVXTPPVIGSERLRLQVPGWR 406
P S+ S+AG+P P + PP G+ R+ L V G R
Sbjct: 43 PALSSVSYAGSPDDPDTQTDAPPAEGARRITLTVNGRR 80
>UniRef50_A7CFA3 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia pickettii 12D|Rep: Putative
uncharacterized protein precursor - Ralstonia pickettii
12D
Length = 489
Score = 33.1 bits (72), Expect = 8.9
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +2
Query: 71 GVGVTGLRYLG---LKLDGRWNFRAHFEKLGPRADGNGRLFEPAPSKRRGSRSGGAPPLH 241
GVG TG +L ++ GRW LG R N R +PAP+ + + APP
Sbjct: 115 GVGATGDHWLAGVDKEIAGRWTAYGGASTLG-RYHSNSRPADPAPAATPPTSNSDAPPPS 173
Query: 242 GGGA 253
G A
Sbjct: 174 GNNA 177
>UniRef50_A5P062 Cluster: Putative uncharacterized protein; n=2;
Proteobacteria|Rep: Putative uncharacterized protein -
Methylobacterium sp. 4-46
Length = 829
Score = 33.1 bits (72), Expect = 8.9
Identities = 42/138 (30%), Positives = 48/138 (34%), Gaps = 4/138 (2%)
Frame = +1
Query: 13 PGRAPPDGCP----PRDQEASAIRGRGDRSSVPRPQTGRSVELPRSL*EVGPSC*WQRPA 180
PG AP P PR RGRG R P P GR PR+ W P
Sbjct: 668 PGPAPTGTSPHSPAPRRPARDRGRGRGGRGRRPAPD-GRGRASPRARRTRNGRRSWPGPP 726
Query: 181 L*AGSFQTSGVPIRWRAASTWGWCGRWHYTARPYGATPXTRQNVAALRRPQRAIAVKAIR 360
+ + S P R CGR + P TR AA RRP A R
Sbjct: 727 PAPRAPRRSAGPARPARRRRSRRCGRSSRSPAGRRRAPGTRPRRAAGRRP----ASGPCR 782
Query: 361 GYRTVSFEAACLLAGAPP 414
R + C +GAPP
Sbjct: 783 WRRRRAGAPRCRGSGAPP 800
>UniRef50_A4RQ84 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 508
Score = 33.1 bits (72), Expect = 8.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 540 HGPPRLEPPRSNXSFAGAPFPPRA 469
H PPRL P + + +G PFPP A
Sbjct: 233 HSPPRLSPGKRGVAISGLPFPPLA 256
>UniRef50_A1CQX4 Cluster: Putative uncharacterized protein; n=1;
Aspergillus clavatus|Rep: Putative uncharacterized
protein - Aspergillus clavatus
Length = 498
Score = 33.1 bits (72), Expect = 8.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 477 PRAEVXTPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSS 358
P AE P V+G+ R++ P RP E + DG VS+
Sbjct: 91 PGAENQNPNVVGTAHARVEAPVTRPAETGAESKNDGGVSA 130
>UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 (Retrovirus-related
Pol polyprotein from type I retrotransposable element
R1) [Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease]; n=1; Bradysia coprophila|Rep:
Retrovirus-related Pol polyprotein from type-1
retrotransposable element R1 (Retrovirus-related Pol
polyprotein from type I retrotransposable element R1)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Sciara coprophila (Fungus gnat)
Length = 1004
Score = 33.1 bits (72), Expect = 8.9
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 319 LRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEA--EALAADYR 453
L R QR + ++ RTVS E +L G PWDLEA L +++R
Sbjct: 788 LNRCQRLVLYASLNVCRTVSTERMQVLHGELPWDLEATRRGLLSEFR 834
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,852,947
Number of Sequences: 1657284
Number of extensions: 13724798
Number of successful extensions: 58694
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 51953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58543
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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