BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O12 (839 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 109 8e-23 UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera... 71 4e-11 UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetic... 49 1e-04 UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1... 49 2e-04 UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetic... 48 2e-04 UniRef50_UPI00015B460B Cluster: PREDICTED: similar to Putative 1... 46 0.001 UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-direct... 45 0.002 UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|R... 44 0.004 UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetic... 42 0.025 UniRef50_UPI00015B47DE Cluster: PREDICTED: similar to has homolo... 41 0.045 UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetic... 40 0.059 UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles g... 40 0.10 UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles g... 39 0.14 UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 38 0.24 UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1 retr... 38 0.31 UniRef50_UPI00005A02EC Cluster: PREDICTED: hypothetical protein ... 37 0.72 UniRef50_UPI00015B47FC Cluster: PREDICTED: similar to non-LTR re... 36 1.3 UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles g... 36 1.3 UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 36 1.7 UniRef50_Q03272 Cluster: Retrovirus-related Pol polyprotein from... 36 1.7 UniRef50_A0VI04 Cluster: Putative uncharacterized protein; n=1; ... 35 2.9 UniRef50_Q0UJP4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 35 2.9 UniRef50_UPI0000EBE020 Cluster: PREDICTED: similar to coiled-coi... 34 3.9 UniRef50_UPI0000E1FA77 Cluster: PREDICTED: hypothetical protein;... 34 3.9 UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles g... 34 3.9 UniRef50_Q3SF04 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8 UniRef50_A3Q0V1 Cluster: Putative esterase; n=5; Mycobacterium|R... 33 6.8 UniRef50_Q5N7A6 Cluster: Epstein-Barr virus EBNA-1-like protein;... 33 6.8 UniRef50_Q7NXK3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9 UniRef50_Q1R069 Cluster: Twin-arginine translocation pathway sig... 33 8.9 UniRef50_A7CFA3 Cluster: Putative uncharacterized protein precur... 33 8.9 UniRef50_A5P062 Cluster: Putative uncharacterized protein; n=2; ... 33 8.9 UniRef50_A4RQ84 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9 UniRef50_A1CQX4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9 UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from... 33 8.9 >UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep: Reverse transcriptase - Bombyx mori (Silk moth) Length = 1076 Score = 109 bits (262), Expect = 8e-23 Identities = 53/94 (56%), Positives = 62/94 (65%), Gaps = 1/94 (1%) Frame = +1 Query: 277 PYGATPXTRQNVAA-LRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYR 453 P A P R +A LRRPQR +A++ IRGYRTVSFEAAC+LAG PPW+LEAE+LAADYR Sbjct: 824 PVWAEPRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLAGTPPWELEAESLAADYR 883 Query: 454 WRXDLXXXXXXXXXXXXXXXXXLQSRRSVLEAWS 555 WR +L SRRSVLE+WS Sbjct: 884 WRSELRARGVARVPESELRARKAHSRRSVLESWS 917 Score = 82.2 bits (194), Expect = 1e-14 Identities = 37/41 (90%), Positives = 38/41 (92%) Frame = +3 Query: 162 LMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284 LM TAGSLSRLLPN+GGPDQV RRLY GVVRSMALYGAPVW Sbjct: 786 LMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYGAPVW 826 Score = 46.0 bits (104), Expect = 0.001 Identities = 23/35 (65%), Positives = 25/35 (71%) Frame = +2 Query: 65 RSGVGVTGLRYLGLKLDGRWNFRAHFEKLGPRADG 169 R GVGV L+YLGL LD RW FRAHF +L PR G Sbjct: 755 RIGVGVQ-LKYLGLVLDSRWAFRAHFAELVPRLMG 788 Score = 35.9 bits (79), Expect = 1.3 Identities = 16/23 (69%), Positives = 18/23 (78%) Frame = +3 Query: 558 RLADPSAGLRTVXAVRPVLXDWV 626 RLA+P+ GLRTV AV PV DWV Sbjct: 919 RLANPTWGLRTVEAVYPVFDDWV 941 >UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera|Rep: Reverse transcriptase - Papilio xuthus Length = 1053 Score = 70.9 bits (166), Expect = 4e-11 Identities = 31/47 (65%), Positives = 38/47 (80%) Frame = +1 Query: 319 LRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWR 459 L RPQR +A++ IRGYRTVS++AAC LAG+ PW LEAE LAA + WR Sbjct: 816 LHRPQRTMAIRMIRGYRTVSYDAACTLAGSLPWVLEAEILAAIHTWR 862 Score = 66.5 bits (155), Expect = 8e-10 Identities = 31/45 (68%), Positives = 34/45 (75%) Frame = +3 Query: 162 LMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296 LM TA +L LLPNVGGP RRL+ GVV+SMALYGAPVW AL Sbjct: 764 LMRTAAALGSLLPNVGGPKAACRRLFTGVVQSMALYGAPVWSGAL 808 Score = 46.0 bits (104), Expect = 0.001 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%) Frame = +2 Query: 35 GAHLVIRRRPRSGVGV---TGLRYLGLKLDGRWNFRAHFEKLGPR 160 GAH+V+ GV + + +RYLGL LDGRW F HF +LGP+ Sbjct: 724 GAHIVV-----GGVNINIQSHIRYLGLMLDGRWTFEGHFRQLGPK 763 >UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetical 115 kDa protein in type I retrotransposable element R1DM (ORF 2); n=1; Tribolium castaneum|Rep: PREDICTED: similar to Hypothetical 115 kDa protein in type I retrotransposable element R1DM (ORF 2) - Tribolium castaneum Length = 973 Score = 49.2 bits (112), Expect = 1e-04 Identities = 22/42 (52%), Positives = 27/42 (64%) Frame = +3 Query: 171 TAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296 T +LSR++PN+GGP R+L GV SM LYG VW AL Sbjct: 726 TISALSRIMPNIGGPGSNRRKLLAGVATSMLLYGCEVWHTAL 767 Score = 37.1 bits (82), Expect = 0.55 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +1 Query: 298 TRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAE 432 T++NV L R I + YRTVS EAA ++ G PP L E Sbjct: 769 TKKNVVVLESTHRRILARVACAYRTVSTEAAQVITGVPPARLLVE 813 >UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1; Drosophila melanogaster|Rep: Endonuclease/reverse transcriptase - Drosophila melanogaster (Fruit fly) Length = 989 Score = 48.8 bits (111), Expect = 2e-04 Identities = 20/38 (52%), Positives = 28/38 (73%) Frame = +3 Query: 171 TAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284 TA +L+R++PNVGGP ARRL + V ++ LY AP+W Sbjct: 744 TAAALARIMPNVGGPRLPARRLLVAVSKATLLYAAPIW 781 Score = 36.3 bits (80), Expect = 0.96 Identities = 18/54 (33%), Positives = 30/54 (55%) Frame = +1 Query: 265 YTARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLE 426 Y A + + + + R R +A++ IRG+RT+S +AA L+G P DL+ Sbjct: 776 YAAPIWSCVSTKKTYLDSARAVSRTMALRLIRGFRTISDDAAHALSGITPIDLD 829 >UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetical 115 kDa protein in type I retrotransposable element R1DM (ORF 2), partial; n=1; Tribolium castaneum|Rep: PREDICTED: similar to Hypothetical 115 kDa protein in type I retrotransposable element R1DM (ORF 2), partial - Tribolium castaneum Length = 2033 Score = 48.4 bits (110), Expect = 2e-04 Identities = 20/52 (38%), Positives = 32/52 (61%) Frame = +3 Query: 141 LRSWALVLMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296 ++ A+ + T +LS ++PN+GGP RR+ V S LYGAP+W +A+ Sbjct: 1370 IQQTAIKVEKTITALSSVMPNIGGPSSSKRRMLSSVAHSAMLYGAPIWHNAM 1421 >UniRef50_UPI00015B460B Cluster: PREDICTED: similar to Putative 115 kDa protein in type-1 retrotransposable element R1DM (Putative 115 kDa protein in type I retrotransposable element R1DM) (ORF 2); n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Putative 115 kDa protein in type-1 retrotransposable element R1DM (Putative 115 kDa protein in type I retrotransposable element R1DM) (ORF 2) - Nasonia vitripennis Length = 680 Score = 46.0 bits (104), Expect = 0.001 Identities = 24/50 (48%), Positives = 32/50 (64%) Frame = +1 Query: 319 LRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRXDL 468 L R QR + ++R RTVS EA ++AG+ PWDLE L+A Y+ R DL Sbjct: 448 LNRCQRYVLYASVRVCRTVSTEAMQVIAGSLPWDLECLRLSALYKVRKDL 497 >UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase) - Tribolium castaneum Length = 932 Score = 45.2 bits (102), Expect = 0.002 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = +3 Query: 171 TAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284 T +LSRL+PN GG RR+ + V RS LYGA +W Sbjct: 683 TMAALSRLMPNTGGAKPYRRRMLVAVARSQILYGAEIW 720 Score = 33.5 bits (73), Expect = 6.8 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +1 Query: 265 YTARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAE 432 Y A +G+ +++ L R QR ++ YRT S EA ++AG P L E Sbjct: 715 YGAEIWGSRHLKSKSLEKLERAQRTALLRVTSAYRTTSNEALQVIAGTKPMALAIE 770 >UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|Rep: Reverse transcriptase - Anopheles gambiae (African malaria mosquito) Length = 1049 Score = 44.4 bits (100), Expect = 0.004 Identities = 19/45 (42%), Positives = 25/45 (55%) Frame = +3 Query: 162 LMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296 +M +L+ PN+GGP RRL+ S+ YGAPVW H L Sbjct: 790 VMKAINALAAFTPNIGGPCSSIRRLHANCAISVLRYGAPVWAHIL 834 Score = 34.7 bits (76), Expect = 2.9 Identities = 14/51 (27%), Positives = 29/51 (56%) Frame = +1 Query: 301 RQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYR 453 +Q+ + + R +A++ YRT+S+EA C++A P + E + ++R Sbjct: 837 KQHQNTVNKVHRKLAMRVTSAYRTISYEAVCVIASMMPLCITLEEDSKNFR 887 >UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetical 115 kDa protein in type I retrotransposable element R1DM (ORF 2); n=6; Tribolium castaneum|Rep: PREDICTED: similar to Hypothetical 115 kDa protein in type I retrotransposable element R1DM (ORF 2) - Tribolium castaneum Length = 1057 Score = 41.5 bits (93), Expect = 0.025 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +3 Query: 174 AGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284 A L RL+PNV GP R++ VV S+ +Y AP+W Sbjct: 672 AAMLGRLMPNVKGPSPSKRKVMAEVVNSIVMYAAPIW 708 >UniRef50_UPI00015B47DE Cluster: PREDICTED: similar to has homology with reverse transcriptase; 5 end of coding region for ORF2 undetermined; putative; n=3; Nasonia vitripennis|Rep: PREDICTED: similar to has homology with reverse transcriptase; 5 end of coding region for ORF2 undetermined; putative - Nasonia vitripennis Length = 883 Score = 40.7 bits (91), Expect = 0.045 Identities = 19/38 (50%), Positives = 22/38 (57%) Frame = +3 Query: 183 LSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296 LSRL+ NV GP RRL M S+ LYGA VW + Sbjct: 168 LSRLMANVRGPRPTVRRLLMANTNSILLYGAEVWADVM 205 >UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetical 115 kDa protein in type I retrotransposable element R1DM (ORF 2); n=2; Tribolium castaneum|Rep: PREDICTED: similar to Hypothetical 115 kDa protein in type I retrotransposable element R1DM (ORF 2) - Tribolium castaneum Length = 1208 Score = 40.3 bits (90), Expect = 0.059 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +3 Query: 183 LSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284 L RL+PNV GP R++ VV S+ +Y AP+W Sbjct: 744 LGRLMPNVKGPSPSKRKVMAEVVNSIVMYAAPIW 777 >UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles gambiae|Rep: Reverse transcriptase - Anopheles gambiae (African malaria mosquito) Length = 973 Score = 39.5 bits (88), Expect = 0.10 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +3 Query: 180 SLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296 SL +++PN+GGP RRL V S Y A +W H L Sbjct: 735 SLIQIMPNIGGPKSSWRRLLADVAFSRLRYNAAIWAHVL 773 Score = 34.3 bits (75), Expect = 3.9 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +1 Query: 256 RWHYTARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPP 414 R Y A + ++N R R +A++ +R Y+T+S A C++A P Sbjct: 761 RLRYNAAIWAHVLVLKENRQLANRVHRLLAMRVVRAYKTISHVAVCVIASMVP 813 >UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles gambiae|Rep: Reverse transcriptase - Anopheles gambiae (African malaria mosquito) Length = 1009 Score = 39.1 bits (87), Expect = 0.14 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +3 Query: 180 SLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHAL 296 +L R++PN GP RR+ V + Y +P+WCH L Sbjct: 739 TLVRMMPNKAGPSSNVRRVIALTVVAKVRYASPIWCHTL 777 >UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3 protein - Bombyx mori (Silk moth) Length = 1682 Score = 38.3 bits (85), Expect = 0.24 Identities = 20/47 (42%), Positives = 25/47 (53%) Frame = +1 Query: 310 VAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADY 450 + L QR IA K + YRTVS +A +LAG P DL A+ Y Sbjct: 1298 IKQLAAVQRGIAQKVCKAYRTVSLNSALILAGMLPLDLRVREAASLY 1344 >UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1 retrotransposable element R1DM; n=13; Drosophila|Rep: Putative 115 kDa protein in type-1 retrotransposable element R1DM - Drosophila melanogaster (Fruit fly) Length = 1021 Score = 37.9 bits (84), Expect = 0.31 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = +1 Query: 298 TRQNVAALRRP---QRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYR 453 T + VAA RR QR I + + RTVS A +L GAPP DL A+ LA Y+ Sbjct: 802 TAEQVAAQRRLASCQRLILLGCLSVCRTVSTVALQVLGGAPPLDLAAKLLAIKYK 856 >UniRef50_UPI00005A02EC Cluster: PREDICTED: hypothetical protein XP_862750; n=1; Canis lupus familiaris|Rep: PREDICTED: hypothetical protein XP_862750 - Canis familiaris Length = 273 Score = 36.7 bits (81), Expect = 0.72 Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 3/86 (3%) Frame = -1 Query: 257 RPHHPHVEAARHLIGTPDVWKEPAQRAGRCHQHEGPTSQSERGSSTDRPV*GRGTEDRSP 78 RP P + A L G P W A R R H+H Q+ ++T P E + Sbjct: 31 RPPPPQIGARASLTGLPGHWLGSALRCQRRHRHHRCLEQAVSVTTTLPP----RPETSTA 86 Query: 77 RPLIADAS*SRGGH---PSGGARPGP 9 RPL D S S G P GG GP Sbjct: 87 RPLRPDRSLSETGSDWPPGGGNHAGP 112 >UniRef50_UPI00015B47FC Cluster: PREDICTED: similar to non-LTR retrotransposon R1Bmks ORF2 protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to non-LTR retrotransposon R1Bmks ORF2 protein - Nasonia vitripennis Length = 986 Score = 35.9 bits (79), Expect = 1.3 Identities = 20/51 (39%), Positives = 27/51 (52%) Frame = +1 Query: 271 ARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDL 423 AR G T Q+ QR I ++ + YRTVS +A C++A A P DL Sbjct: 814 ARGGGDLVRTNQHRQTFLSIQRTILLRVTKAYRTVSGDALCVIARAIPLDL 864 >UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles gambiae|Rep: Reverse transcriptase - Anopheles gambiae (African malaria mosquito) Length = 1173 Score = 35.9 bits (79), Expect = 1.3 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = +3 Query: 165 MATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHA 293 + TA +L L+ N GP RRL VV S+ Y APVW A Sbjct: 776 LRTAKALGCLMRNHSGPKCAKRRLLASVVDSILRYAAPVWHEA 818 >UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles gambiae|Rep: Reverse transcriptase - Anopheles gambiae (African malaria mosquito) Length = 1201 Score = 35.5 bits (78), Expect = 1.7 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +3 Query: 180 SLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHALXPPE 308 +++RL+PN+ GP RL V S Y APVW A+ E Sbjct: 836 AVNRLMPNLHGPRTSMSRLLANVADSTMRYAAPVWHEAIGNQE 878 Score = 33.5 bits (73), Expect = 6.8 Identities = 17/32 (53%), Positives = 20/32 (62%) Frame = +1 Query: 319 LRRPQRAIAVKAIRGYRTVSFEAACLLAGAPP 414 LRR QR A+ R +RTV +E A LLAG P Sbjct: 883 LRRVQRKSAIGLARTFRTVRYETAVLLAGLLP 914 >UniRef50_Q03272 Cluster: Retrovirus-related Pol polyprotein from type-1 retrotransposable element R1 4 (Retrovirus-related Pol polyprotein from type I retrotransposable element R1 4) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease]; n=1; Nasonia vitripennis|Rep: Retrovirus-related Pol polyprotein from type-1 retrotransposable element R1 4 (Retrovirus-related Pol polyprotein from type I retrotransposable element R1 4) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nasonia vitripennis (Parasitic wasp) Length = 392 Score = 35.5 bits (78), Expect = 1.7 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 334 RAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWR 459 R I + R YR+ S+EAAC+LAG P ++ A Y R Sbjct: 172 RQILIAITRCYRSTSYEAACVLAGTLPICIQLRVSVAKYHLR 213 >UniRef50_A0VI04 Cluster: Putative uncharacterized protein; n=1; Delftia acidovorans SPH-1|Rep: Putative uncharacterized protein - Delftia acidovorans SPH-1 Length = 640 Score = 34.7 bits (76), Expect = 2.9 Identities = 38/119 (31%), Positives = 51/119 (42%) Frame = -1 Query: 359 RIALTAIARCGRRSAATFWRVQGVAPYGRAV*CHRPHHPHVEAARHLIGTPDVWKEPAQR 180 R+ L +ARC AA R++G AP + C R H P + R GT + P R Sbjct: 300 RVRLGPLARCEAAKAAGRGRLRGRAP---LLACPRAHAP---SGR---GTGQA-RVPHAR 349 Query: 179 AGRCHQHEGPTSQSERGSSTDRPV*GRGTEDRSPRPLIADAS*SRGGHPSGGARPGPCQ 3 G +H P S + RG + R RG DR +P A + R P G PC+ Sbjct: 350 CGLACRH--PLSGAGRGPAPHR----RGAADRWTQPGPAGHAPDRRDGPQPGRAQAPCR 402 >UniRef50_Q0UJP4 Cluster: Predicted protein; n=1; Phaeosphaeria nodorum|Rep: Predicted protein - Phaeosphaeria nodorum (Septoria nodorum) Length = 485 Score = 34.7 bits (76), Expect = 2.9 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +1 Query: 7 HGPGRAPPDGCPPRDQEASAIRGRGDRSSVPRPQTGRSVELP 132 +GP PP P ++ RGRGDR P PQ ++ P Sbjct: 10 YGPNNPPPPPMGPPPGKSGRARGRGDRGEPPHPQDSQTSSGP 51 >UniRef50_UPI0000EBE020 Cluster: PREDICTED: similar to coiled-coil domain containing 66; n=1; Bos taurus|Rep: PREDICTED: similar to coiled-coil domain containing 66 - Bos taurus Length = 492 Score = 34.3 bits (75), Expect = 3.9 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +1 Query: 10 GPGRAPPDGCPPRDQEASAIRGRGDRSSVPRPQTGRSV-ELPRSL*EVGP 156 G GR P PP+ ++A + RGR + PRPQ RS L RSL GP Sbjct: 238 GRGRRPRGRHPPQSRDARS-RGRSQTCAPPRPQPRRSARSLARSLALRGP 286 >UniRef50_UPI0000E1FA77 Cluster: PREDICTED: hypothetical protein; n=1; Pan troglodytes|Rep: PREDICTED: hypothetical protein - Pan troglodytes Length = 113 Score = 34.3 bits (75), Expect = 3.9 Identities = 20/59 (33%), Positives = 24/59 (40%) Frame = -3 Query: 543 QHGPPRLEPPRSNXSFAGAPFPPRAEVXTPPVIGSERLRLQVPGWRPGEQARRLEGDGA 367 + G P PP A P PP PP +G R R +VP +AR G GA Sbjct: 54 RRGAPSPPPPEPEPEPAHPPAPPPPPPEQPPSLGPRRRRGRVPAVAARARARAPAGGGA 112 >UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles gambiae|Rep: Reverse transcriptase - Anopheles gambiae (African malaria mosquito) Length = 1248 Score = 34.3 bits (75), Expect = 3.9 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +3 Query: 183 LSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHA 293 ++ ++ N GP RRL GV ++ YGAP+W A Sbjct: 765 VTNVMRNHSGPRVAKRRLLAGVSEAIIRYGAPIWAEA 801 >UniRef50_Q3SF04 Cluster: Putative uncharacterized protein; n=1; Thiobacillus denitrificans ATCC 25259|Rep: Putative uncharacterized protein - Thiobacillus denitrificans (strain ATCC 25259) Length = 310 Score = 33.5 bits (73), Expect = 6.8 Identities = 24/77 (31%), Positives = 30/77 (38%) Frame = -1 Query: 242 HVEAARHLIGTPDVWKEPAQRAGRCHQHEGPTSQSERGSSTDRPV*GRGTEDRSPRPLIA 63 H +AA G D W++ AQ G Q G + G R G G +R P Sbjct: 96 HDDAASWQSGAQDHWRQGAQERGGPGQ--GGYGELSYGQGGQRRGQGEGAYERGPEAFGQ 153 Query: 62 DAS*SRGGHPSGGARPG 12 SRGG+ G PG Sbjct: 154 WQGGSRGGYGQPGHEPG 170 >UniRef50_A3Q0V1 Cluster: Putative esterase; n=5; Mycobacterium|Rep: Putative esterase - Mycobacterium sp. (strain JLS) Length = 450 Score = 33.5 bits (73), Expect = 6.8 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +3 Query: 93 GTSASNWTVGGTSALTLRSWALVLMATAGSLSR-LLPNVGGPDQVARRLYMGVVRSMALY 269 G W++GGT A+ L L +T ++ L PN G +Q RLY G + A Y Sbjct: 291 GWGVVGWSMGGTCAVDLSVMHPELFSTFEDIAGDLTPNAGTKEQTIARLYGGNTAAWAAY 350 >UniRef50_Q5N7A6 Cluster: Epstein-Barr virus EBNA-1-like protein; n=1; Oryza sativa (japonica cultivar-group)|Rep: Epstein-Barr virus EBNA-1-like protein - Oryza sativa subsp. japonica (Rice) Length = 195 Score = 33.5 bits (73), Expect = 6.8 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = +2 Query: 152 GPRADGNGRLFEPAPSKRRGSRSGGAPPLHGGGAVDG 262 GP D GR+ + +G R G PP H GG G Sbjct: 46 GPNGDRGGRMTPAGGKREKGGRERGLPPCHFGGKGGG 82 >UniRef50_Q7NXK3 Cluster: Putative uncharacterized protein; n=1; Chromobacterium violaceum|Rep: Putative uncharacterized protein - Chromobacterium violaceum Length = 132 Score = 33.1 bits (72), Expect = 8.9 Identities = 20/56 (35%), Positives = 22/56 (39%) Frame = -1 Query: 194 EPAQRAGRCHQHEGPTSQSERGSSTDRPV*GRGTEDRSPRPLIADAS*SRGGHPSG 27 EP QR G GP SE+G + G G R AS S GG P G Sbjct: 59 EPGQRPGTAAGRRGPPQLSEQGGDIRVQLVGGGAVGHGSRAGTGRASISDGGEPGG 114 >UniRef50_Q1R069 Cluster: Twin-arginine translocation pathway signal; n=4; Gammaproteobacteria|Rep: Twin-arginine translocation pathway signal - Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB13768) Length = 227 Score = 33.1 bits (72), Expect = 8.9 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -3 Query: 519 PPRSNXSFAGAPFPPRAEVXTPPVIGSERLRLQVPGWR 406 P S+ S+AG+P P + PP G+ R+ L V G R Sbjct: 43 PALSSVSYAGSPDDPDTQTDAPPAEGARRITLTVNGRR 80 >UniRef50_A7CFA3 Cluster: Putative uncharacterized protein precursor; n=1; Ralstonia pickettii 12D|Rep: Putative uncharacterized protein precursor - Ralstonia pickettii 12D Length = 489 Score = 33.1 bits (72), Expect = 8.9 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Frame = +2 Query: 71 GVGVTGLRYLG---LKLDGRWNFRAHFEKLGPRADGNGRLFEPAPSKRRGSRSGGAPPLH 241 GVG TG +L ++ GRW LG R N R +PAP+ + + APP Sbjct: 115 GVGATGDHWLAGVDKEIAGRWTAYGGASTLG-RYHSNSRPADPAPAATPPTSNSDAPPPS 173 Query: 242 GGGA 253 G A Sbjct: 174 GNNA 177 >UniRef50_A5P062 Cluster: Putative uncharacterized protein; n=2; Proteobacteria|Rep: Putative uncharacterized protein - Methylobacterium sp. 4-46 Length = 829 Score = 33.1 bits (72), Expect = 8.9 Identities = 42/138 (30%), Positives = 48/138 (34%), Gaps = 4/138 (2%) Frame = +1 Query: 13 PGRAPPDGCP----PRDQEASAIRGRGDRSSVPRPQTGRSVELPRSL*EVGPSC*WQRPA 180 PG AP P PR RGRG R P P GR PR+ W P Sbjct: 668 PGPAPTGTSPHSPAPRRPARDRGRGRGGRGRRPAPD-GRGRASPRARRTRNGRRSWPGPP 726 Query: 181 L*AGSFQTSGVPIRWRAASTWGWCGRWHYTARPYGATPXTRQNVAALRRPQRAIAVKAIR 360 + + S P R CGR + P TR AA RRP A R Sbjct: 727 PAPRAPRRSAGPARPARRRRSRRCGRSSRSPAGRRRAPGTRPRRAAGRRP----ASGPCR 782 Query: 361 GYRTVSFEAACLLAGAPP 414 R + C +GAPP Sbjct: 783 WRRRRAGAPRCRGSGAPP 800 >UniRef50_A4RQ84 Cluster: Putative uncharacterized protein; n=1; Magnaporthe grisea|Rep: Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea) Length = 508 Score = 33.1 bits (72), Expect = 8.9 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 540 HGPPRLEPPRSNXSFAGAPFPPRA 469 H PPRL P + + +G PFPP A Sbjct: 233 HSPPRLSPGKRGVAISGLPFPPLA 256 >UniRef50_A1CQX4 Cluster: Putative uncharacterized protein; n=1; Aspergillus clavatus|Rep: Putative uncharacterized protein - Aspergillus clavatus Length = 498 Score = 33.1 bits (72), Expect = 8.9 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -3 Query: 477 PRAEVXTPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSS 358 P AE P V+G+ R++ P RP E + DG VS+ Sbjct: 91 PGAENQNPNVVGTAHARVEAPVTRPAETGAESKNDGGVSA 130 >UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from type-1 retrotransposable element R1 (Retrovirus-related Pol polyprotein from type I retrotransposable element R1) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease]; n=1; Bradysia coprophila|Rep: Retrovirus-related Pol polyprotein from type-1 retrotransposable element R1 (Retrovirus-related Pol polyprotein from type I retrotransposable element R1) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Sciara coprophila (Fungus gnat) Length = 1004 Score = 33.1 bits (72), Expect = 8.9 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = +1 Query: 319 LRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEA--EALAADYR 453 L R QR + ++ RTVS E +L G PWDLEA L +++R Sbjct: 788 LNRCQRLVLYASLNVCRTVSTERMQVLHGELPWDLEATRRGLLSEFR 834 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 617,852,947 Number of Sequences: 1657284 Number of extensions: 13724798 Number of successful extensions: 58694 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 51953 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 58543 length of database: 575,637,011 effective HSP length: 100 effective length of database: 409,908,611 effective search space used: 73373641369 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -