BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O12 (839 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC063316-1|AAH63316.1| 369|Homo sapiens FBXL17 protein protein. 31 3.9 BC125155-1|AAI25156.1| 298|Homo sapiens C2orf54 protein protein. 31 5.2 BC125154-1|AAI25155.1| 298|Homo sapiens C2orf54 protein protein. 31 5.2 BC014176-1|AAH14176.1| 640|Homo sapiens ubiquitin specific pept... 31 5.2 AL365205-13|CAI13188.1| 640|Homo sapiens ubiquitin specific pep... 31 5.2 AL365205-12|CAI13186.1| 585|Homo sapiens ubiquitin specific pep... 31 5.2 AL365205-11|CAI13187.1| 688|Homo sapiens ubiquitin specific pep... 31 5.2 AJ586139-1|CAE51939.1| 688|Homo sapiens ubiquitin-specific prot... 31 5.2 BC011805-1|AAH11805.2| 251|Homo sapiens Unknown (protein for IM... 30 9.1 BC008623-1|AAH08623.1| 147|Homo sapiens ROBO3 protein protein. 30 9.1 AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 30 9.1 AL607122-4|CAI14973.1| 319|Homo sapiens forkhead box E3 protein. 30 9.1 AK024697-1|BAB14966.1| 309|Homo sapiens protein ( Homo sapiens ... 30 9.1 AF275722-1|AAF82793.1| 319|Homo sapiens forkhead transcription ... 30 9.1 >BC063316-1|AAH63316.1| 369|Homo sapiens FBXL17 protein protein. Length = 369 Score = 31.5 bits (68), Expect = 3.9 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -3 Query: 537 GPPR-LEPPRSNXSFAGAPFPPRAEVXTPPVIGSERLRLQVPGWRPGEQAR 388 GP R L PP + F G P P AE+ TPP + +R VP P +Q R Sbjct: 165 GPVRFLGPPAAVQLFRG-PTPSPAELPTPPEMVCKRKGAGVPACTPCKQPR 214 >BC125155-1|AAI25156.1| 298|Homo sapiens C2orf54 protein protein. Length = 298 Score = 31.1 bits (67), Expect = 5.2 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +1 Query: 241 WGWCG---RWHYTARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSF 381 WGW RW RP G+ N A+LR Q +++ G+RT+SF Sbjct: 6 WGWGASACRWGPAERPAGSL-----NAASLREEQLHLSLLVSSGWRTISF 50 >BC125154-1|AAI25155.1| 298|Homo sapiens C2orf54 protein protein. Length = 298 Score = 31.1 bits (67), Expect = 5.2 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +1 Query: 241 WGWCG---RWHYTARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSF 381 WGW RW RP G+ N A+LR Q +++ G+RT+SF Sbjct: 6 WGWGAAACRWGPAERPAGSL-----NAASLREEQLHLSLLVSSGWRTISF 50 >BC014176-1|AAH14176.1| 640|Homo sapiens ubiquitin specific peptidase 49 protein. Length = 640 Score = 31.1 bits (67), Expect = 5.2 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +2 Query: 23 RRLMGAHLVIRRRPRSGVGVTGLRYLG 103 RR+ A L +RR+P GVTGLR LG Sbjct: 233 RRVPAATLKLRRQPAMAPGVTGLRNLG 259 >AL365205-13|CAI13188.1| 640|Homo sapiens ubiquitin specific peptidase 49 protein. Length = 640 Score = 31.1 bits (67), Expect = 5.2 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +2 Query: 23 RRLMGAHLVIRRRPRSGVGVTGLRYLG 103 RR+ A L +RR+P GVTGLR LG Sbjct: 233 RRVPAATLKLRRQPAMAPGVTGLRNLG 259 >AL365205-12|CAI13186.1| 585|Homo sapiens ubiquitin specific peptidase 49 protein. Length = 585 Score = 31.1 bits (67), Expect = 5.2 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +2 Query: 23 RRLMGAHLVIRRRPRSGVGVTGLRYLG 103 RR+ A L +RR+P GVTGLR LG Sbjct: 233 RRVPAATLKLRRQPAMAPGVTGLRNLG 259 >AL365205-11|CAI13187.1| 688|Homo sapiens ubiquitin specific peptidase 49 protein. Length = 688 Score = 31.1 bits (67), Expect = 5.2 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +2 Query: 23 RRLMGAHLVIRRRPRSGVGVTGLRYLG 103 RR+ A L +RR+P GVTGLR LG Sbjct: 233 RRVPAATLKLRRQPAMAPGVTGLRNLG 259 >AJ586139-1|CAE51939.1| 688|Homo sapiens ubiquitin-specific proteinase 49 protein. Length = 688 Score = 31.1 bits (67), Expect = 5.2 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +2 Query: 23 RRLMGAHLVIRRRPRSGVGVTGLRYLG 103 RR+ A L +RR+P GVTGLR LG Sbjct: 233 RRVPAATLKLRRQPAMAPGVTGLRNLG 259 >BC011805-1|AAH11805.2| 251|Homo sapiens Unknown (protein for IMAGE:4335840) protein. Length = 251 Score = 30.3 bits (65), Expect = 9.1 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 4/85 (4%) Frame = -1 Query: 257 RPHHPHVEAARHLIGTPDVWKEPAQRAGRCHQHEGPTSQSERGSSTD-RPV*GRGTEDRS 81 RP H R +G P + A+R H GP + E S + +P + ++RS Sbjct: 102 RPAHGPRGGRRGAVGAPQTLEAEAERKALVEAHAGPQPEDEPQYSMEAKPEEHQPQDERS 161 Query: 80 P---RPLIADAS*SRGGHPSGGARP 15 P R A RGG P+ P Sbjct: 162 PLHGRAGAAGIILKRGGLPADHRTP 186 >BC008623-1|AAH08623.1| 147|Homo sapiens ROBO3 protein protein. Length = 147 Score = 30.3 bits (65), Expect = 9.1 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +1 Query: 7 HGPGRAPPDGCPPRDQEAS---AIRGRGDRSSVPRPQTG 114 + PG PP PP ++EAS +R G SS+ R ++G Sbjct: 25 NSPGDLPPPPLPPPEEEASWALELRAAGSMSSLERERSG 63 >AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3 protein. Length = 1386 Score = 30.3 bits (65), Expect = 9.1 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +1 Query: 7 HGPGRAPPDGCPPRDQEAS---AIRGRGDRSSVPRPQTG 114 + PG PP PP ++EAS +R G SS+ R ++G Sbjct: 1262 NSPGDLPPPPLPPPEEEASWALELRAAGSMSSLERERSG 1300 >AL607122-4|CAI14973.1| 319|Homo sapiens forkhead box E3 protein. Length = 319 Score = 30.3 bits (65), Expect = 9.1 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -3 Query: 522 EPPR-SNXSFAGAPFPPRAEVXTPPVIGSERLRLQVPGWRPG 400 EPP + A A FPP A +PP+ RL +P RPG Sbjct: 236 EPPCCAAPDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRPG 277 >AK024697-1|BAB14966.1| 309|Homo sapiens protein ( Homo sapiens cDNA: FLJ21044 fis, clone CAE11659. ). Length = 309 Score = 30.3 bits (65), Expect = 9.1 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +1 Query: 7 HGPGRAPPDGCPPRDQEAS---AIRGRGDRSSVPRPQTG 114 + PG PP PP ++EAS +R G SS+ R ++G Sbjct: 187 NSPGDLPPPPLPPPEEEASWALELRAAGSMSSLERERSG 225 >AF275722-1|AAF82793.1| 319|Homo sapiens forkhead transcription factor protein. Length = 319 Score = 30.3 bits (65), Expect = 9.1 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -3 Query: 522 EPPR-SNXSFAGAPFPPRAEVXTPPVIGSERLRLQVPGWRPG 400 EPP + A A FPP A +PP+ RL +P RPG Sbjct: 236 EPPCCAAPDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRPG 277 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 92,207,476 Number of Sequences: 237096 Number of extensions: 2217834 Number of successful extensions: 7872 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 6605 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7865 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10593928420 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -