BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O12 (839 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 49 9e-06 X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 38 0.017 AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L lon... 30 3.4 AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, ... 30 3.4 AY102651-1|AAM27480.1| 602|Drosophila melanogaster GH01517p pro... 29 6.0 AE014297-1927|AAF55121.3| 602|Drosophila melanogaster CG33485-P... 29 6.0 BT001591-1|AAN71346.1| 760|Drosophila melanogaster RE27138p pro... 29 7.9 AY071846-1|AAL60055.1| 760|Drosophila melanogaster hepatocyte g... 29 7.9 AY051789-1|AAK93213.1| 760|Drosophila melanogaster LD30575p pro... 29 7.9 AE014134-454|AAF51222.1| 647|Drosophila melanogaster CG2903-PA,... 29 7.9 AE014134-453|AAN10412.2| 760|Drosophila melanogaster CG2903-PC,... 29 7.9 AE014134-452|AAF51221.2| 760|Drosophila melanogaster CG2903-PB,... 29 7.9 >AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease/reverse transcriptase protein. Length = 989 Score = 48.8 bits (111), Expect = 9e-06 Identities = 20/38 (52%), Positives = 28/38 (73%) Frame = +3 Query: 171 TAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW 284 TA +L+R++PNVGGP ARRL + V ++ LY AP+W Sbjct: 744 TAAALARIMPNVGGPRLPARRLLVAVSKATLLYAAPIW 781 Score = 36.3 bits (80), Expect = 0.052 Identities = 18/54 (33%), Positives = 30/54 (55%) Frame = +1 Query: 265 YTARPYGATPXTRQNVAALRRPQRAIAVKAIRGYRTVSFEAACLLAGAPPWDLE 426 Y A + + + + R R +A++ IRG+RT+S +AA L+G P DL+ Sbjct: 776 YAAPIWSCVSTKKTYLDSARAVSRTMALRLIRGFRTISDDAAHALSGITPIDLD 829 >X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Drosophila melanogasterDNA for type I retrotransposable element R1Dm. ). Length = 1021 Score = 37.9 bits (84), Expect = 0.017 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = +1 Query: 298 TRQNVAALRRP---QRAIAVKAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYR 453 T + VAA RR QR I + + RTVS A +L GAPP DL A+ LA Y+ Sbjct: 802 TAEQVAAQRRLASCQRLILLGCLSVCRTVSTVALQVLGGAPPLDLAAKLLAIKYK 856 Score = 30.3 bits (65), Expect = 3.4 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +3 Query: 162 LMATAGSLSRLLPNVGGPDQVARR-LYMGVVRSMALYGAPVW 284 + G+L+R+L G ARR +Y G++ L+GAPVW Sbjct: 758 MTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLFGAPVW 799 >AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L long isoform protein. Length = 5322 Score = 30.3 bits (65), Expect = 3.4 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 188 PAPSKRRGSRSGGAPPLHGGGAVDGT 265 PAP GS SG P H A+DG+ Sbjct: 2802 PAPGSASGSNSGNTTPAHKSSALDGS 2827 >AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, isoform A protein. Length = 5322 Score = 30.3 bits (65), Expect = 3.4 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 188 PAPSKRRGSRSGGAPPLHGGGAVDGT 265 PAP GS SG P H A+DG+ Sbjct: 2802 PAPGSASGSNSGNTTPAHKSSALDGS 2827 >AY102651-1|AAM27480.1| 602|Drosophila melanogaster GH01517p protein. Length = 602 Score = 29.5 bits (63), Expect = 6.0 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%) Frame = +1 Query: 217 IRWRAASTWGWCGRWHYTARP-----YGATPXTRQNVAALRRPQRA 339 +RW+ W WC RWH+ + P +R+ AA R+P A Sbjct: 558 LRWQ----WRWCWRWHWKGTQQQDPRHYLKPQSRRVAAACRQPYEA 599 >AE014297-1927|AAF55121.3| 602|Drosophila melanogaster CG33485-PA protein. Length = 602 Score = 29.5 bits (63), Expect = 6.0 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%) Frame = +1 Query: 217 IRWRAASTWGWCGRWHYTARP-----YGATPXTRQNVAALRRPQRA 339 +RW+ W WC RWH+ + P +R+ AA R+P A Sbjct: 558 LRWQ----WRWCWRWHWKGTQQQDPRHYLKPQSRRVAAACRQPYEA 599 >BT001591-1|AAN71346.1| 760|Drosophila melanogaster RE27138p protein. Length = 760 Score = 29.1 bits (62), Expect = 7.9 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 537 GPPRLEPPRSNXSFAGAP-----FPPRAEVXTPPVIGSERLRLQVPGWR----PGEQARR 385 G P++ PP FA P P + + PP I + Q+PG + PG+Q ++ Sbjct: 613 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 672 Query: 384 LEG 376 + G Sbjct: 673 IPG 675 >AY071846-1|AAL60055.1| 760|Drosophila melanogaster hepatocyte growth factor-regulatedtyrosine kinase substrate protein. Length = 760 Score = 29.1 bits (62), Expect = 7.9 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 537 GPPRLEPPRSNXSFAGAP-----FPPRAEVXTPPVIGSERLRLQVPGWR----PGEQARR 385 G P++ PP FA P P + + PP I + Q+PG + PG+Q ++ Sbjct: 613 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 672 Query: 384 LEG 376 + G Sbjct: 673 IPG 675 >AY051789-1|AAK93213.1| 760|Drosophila melanogaster LD30575p protein. Length = 760 Score = 29.1 bits (62), Expect = 7.9 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 537 GPPRLEPPRSNXSFAGAP-----FPPRAEVXTPPVIGSERLRLQVPGWR----PGEQARR 385 G P++ PP FA P P + + PP I + Q+PG + PG+Q ++ Sbjct: 613 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 672 Query: 384 LEG 376 + G Sbjct: 673 IPG 675 >AE014134-454|AAF51222.1| 647|Drosophila melanogaster CG2903-PA, isoform A protein. Length = 647 Score = 29.1 bits (62), Expect = 7.9 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 537 GPPRLEPPRSNXSFAGAP-----FPPRAEVXTPPVIGSERLRLQVPGWR----PGEQARR 385 G P++ PP FA P P + + PP I + Q+PG + PG+Q ++ Sbjct: 500 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 559 Query: 384 LEG 376 + G Sbjct: 560 IPG 562 >AE014134-453|AAN10412.2| 760|Drosophila melanogaster CG2903-PC, isoform C protein. Length = 760 Score = 29.1 bits (62), Expect = 7.9 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 537 GPPRLEPPRSNXSFAGAP-----FPPRAEVXTPPVIGSERLRLQVPGWR----PGEQARR 385 G P++ PP FA P P + + PP I + Q+PG + PG+Q ++ Sbjct: 613 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 672 Query: 384 LEG 376 + G Sbjct: 673 IPG 675 >AE014134-452|AAF51221.2| 760|Drosophila melanogaster CG2903-PB, isoform B protein. Length = 760 Score = 29.1 bits (62), Expect = 7.9 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 537 GPPRLEPPRSNXSFAGAP-----FPPRAEVXTPPVIGSERLRLQVPGWR----PGEQARR 385 G P++ PP FA P P + + PP I + Q+PG + PG+Q ++ Sbjct: 613 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 672 Query: 384 LEG 376 + G Sbjct: 673 IPG 675 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,137,487 Number of Sequences: 53049 Number of extensions: 672385 Number of successful extensions: 2771 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2401 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2762 length of database: 24,988,368 effective HSP length: 84 effective length of database: 20,532,252 effective search space used: 4003789140 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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