BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O12 (839 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 4.1 Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr... 29 4.1 U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.4 U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.4 AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.4 AC103567-7|AAL35730.2| 337|Caenorhabditis elegans Hypothetical ... 29 5.4 Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 28 7.2 U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 9.5 AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 9.5 >Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical protein F52G2.2a protein. Length = 1319 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Frame = -3 Query: 561 SVRPRLQHGPPR-LEPPRSNXSFAGAPFPP 475 S +PR P L PP S SF GAP PP Sbjct: 1223 SYQPRYNGAPSGPLPPPSSQSSFNGAPAPP 1252 >Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical protein F52G2.2b protein. Length = 1129 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Frame = -3 Query: 561 SVRPRLQHGPPR-LEPPRSNXSFAGAPFPP 475 S +PR P L PP S SF GAP PP Sbjct: 1033 SYQPRYNGAPSGPLPPPSSQSSFNGAPAPP 1062 >U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect protein 1, isoformb protein. Length = 1437 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/50 (32%), Positives = 18/50 (36%) Frame = -3 Query: 552 PRLQHGPPRLEPPRSNXSFAGAPFPPRAEVXTPPVIGSERLRLQVPGWRP 403 P + GPP PP G P PP PP+ G PG P Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769 >U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect protein 1, isoforma protein. Length = 1435 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/50 (32%), Positives = 18/50 (36%) Frame = -3 Query: 552 PRLQHGPPRLEPPRSNXSFAGAPFPPRAEVXTPPVIGSERLRLQVPGWRP 403 P + GPP PP G P PP PP+ G PG P Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769 >AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. Length = 1018 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/50 (32%), Positives = 18/50 (36%) Frame = -3 Query: 552 PRLQHGPPRLEPPRSNXSFAGAPFPPRAEVXTPPVIGSERLRLQVPGWRP 403 P + GPP PP G P PP PP+ G PG P Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352 >AC103567-7|AAL35730.2| 337|Caenorhabditis elegans Hypothetical protein Y51F10.3 protein. Length = 337 Score = 28.7 bits (61), Expect = 5.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 200 WKEPAQRAGRCHQHEGPTSQSERGSSTD 117 W AQR R + GP+S + R SS+D Sbjct: 226 WPAQAQRGTRVNPRGGPSSSTHRSSSSD 253 >Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein T07D4.3 protein. Length = 1301 Score = 28.3 bits (60), Expect = 7.2 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 3/58 (5%) Frame = +2 Query: 62 PRSGVGVTGLRYLGLKLDGRWNF-RAHFEKLGP--RADGNGRLFEPAPSKRRGSRSGG 226 P SG+G G G WN R ++ +G R G G + R G R GG Sbjct: 1235 PNSGMGYQNFNNSGYGASGDWNAGRGNYGNVGSGYRGAGGGGGYRGGRGGRGGGRGGG 1292 >U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418 protein. Length = 1829 Score = 27.9 bits (59), Expect = 9.5 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -1 Query: 626 HPVREDRTDRLDGTEAGRRVRQA*DHASSTDRRDWSLRART 504 H +DR L G+RVR+ ++AS DWS + +T Sbjct: 1207 HHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQT 1247 >AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. Length = 1829 Score = 27.9 bits (59), Expect = 9.5 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -1 Query: 626 HPVREDRTDRLDGTEAGRRVRQA*DHASSTDRRDWSLRART 504 H +DR L G+RVR+ ++AS DWS + +T Sbjct: 1207 HHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQT 1247 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,890,126 Number of Sequences: 27780 Number of extensions: 280684 Number of successful extensions: 959 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 834 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 956 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2077023564 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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