BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O12 (839 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 27 0.26 At3g22070.1 68416.m02785 proline-rich family protein contains pr... 29 5.1 At1g53260.1 68414.m06035 hypothetical protein low similarity to ... 29 5.1 At1g13920.1 68414.m01633 remorin family protein contains Pfam do... 28 8.9 >At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to auxin down regulated GB:X69640 GI:296442 from [Glycine max]; contains Pfam profile PF00234: Protease inhibitor/seed storage/LTP family Length = 297 Score = 27.1 bits (57), Expect(2) = 0.26 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = +2 Query: 155 PRADGNGRLFEPAPSKRRGSRSGGAPPLHGG 247 P G G P G + GG PP HGG Sbjct: 40 PPQHGGGGGGGSKPPPHHGGKGGGKPPPHGG 70 Score = 24.6 bits (51), Expect(2) = 0.26 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = +2 Query: 221 GGAPPLHGGGAVDG 262 GG PP HGGG G Sbjct: 72 GGGPPHHGGGGGGG 85 >At3g22070.1 68416.m02785 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 178 Score = 28.7 bits (61), Expect = 5.1 Identities = 11/34 (32%), Positives = 15/34 (44%) Frame = -3 Query: 552 PRLQHGPPRLEPPRSNXSFAGAPFPPRAEVXTPP 451 P + PP PP + AP PP ++ PP Sbjct: 113 PSTPNPPPEFSPPPPDLDTTTAPPPPSTDIPIPP 146 >At1g53260.1 68414.m06035 hypothetical protein low similarity to SP|Q38732 DAG protein, chloroplast precursor {Antirrhinum majus} Length = 358 Score = 28.7 bits (61), Expect = 5.1 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -3 Query: 534 PPRLEPPRSNXSFAGAPFPP 475 PP ++PP N ++ G P PP Sbjct: 216 PPHIQPPNMNQNYRGPPPPP 235 >At1g13920.1 68414.m01633 remorin family protein contains Pfam domain, PF03763: Remorin, C-terminal region Length = 345 Score = 27.9 bits (59), Expect = 8.9 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -3 Query: 534 PPRLEPPRSNXSFAGAPFPPRAEVXTPPVIGSERLRL 424 PPR++PP S AP PP PP++ LRL Sbjct: 188 PPRIQPPLRTRSEPRAPPPP-----PPPLLSPSPLRL 219 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,705,338 Number of Sequences: 28952 Number of extensions: 275772 Number of successful extensions: 894 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 816 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 893 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1941125600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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