Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O10
         (836 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    47   2e-07
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.7  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   1.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   3.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   5.2  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.1  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 29/61 (47%), Positives = 39/61 (63%)
 Frame = +2

Query: 548 EREISVDDGNSCCSDDTVLSVGNEAPVSNYEEKASQNTHQELTSFKHIQTHLSAISQLSQ 727
           +RE    D NSC SDDTVLSVGNE P         ++T     SFK+I++HL+AISQ++ 
Sbjct: 8   DRESPNIDHNSCSSDDTVLSVGNENP-------PPEDTP---LSFKNIESHLNAISQITN 57

Query: 728 N 730
           +
Sbjct: 58  S 58


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 3   LES*LRDHAHNIPFKQNNCLIKTIN 77
           LE  LR+HA + PF+ N C    +N
Sbjct: 246 LEYHLRNHAGSKPFQCNKCDYTCVN 270


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
          protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 3  LES*LRDHAHNIPFKQNNCLIKTIN 77
          LE  LR+HA + PF+ N C    +N
Sbjct: 4  LEYHLRNHAGSKPFQCNKCDYTCVN 28


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 621 HPYPTTKRKPARIPTKN 671
           HPYP     PA IP +N
Sbjct: 177 HPYPNFGVPPAGIPLQN 193


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 488 NTPNFDDRNTESVSPVVEVNERE 556
           ++PN     T S  P +EVNER+
Sbjct: 219 DSPNSKKSATPSPPPQLEVNERK 241


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -1

Query: 356 LDLSCLSCSESMDRHRSGLGS*CPAYGRIRRPFSFSVTPSYHLNFIVQP 210
           ++ SC+ C ES +R  S +   CP      R F   VT    L  + +P
Sbjct: 83  MERSCMCCQESGEREAS-VSLFCPKAKPGERKF-IKVTTKAPLECMCRP 129


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -2

Query: 640 FVVGYGCLVSN*QHGVVATARITIVHAYFSFIHFNNGTYTLCVSVI 503
           FV+G  C++     G++       V   F F+HF     T+   V+
Sbjct: 79  FVMGLFCILKFALDGLMLDKTGICVSNVFDFVHFYYPVATMSFYVL 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,375
Number of Sequences: 336
Number of extensions: 4768
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)