BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O10 (836 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 32 0.088 SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 30 0.35 SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 27 2.5 SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 2.5 SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 27 4.4 SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 26 7.6 SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 26 7.6 >SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 520 Score = 32.3 bits (70), Expect = 0.088 Identities = 17/89 (19%), Positives = 44/89 (49%) Frame = +2 Query: 437 RDNSSPDNVFSTEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDDTVLSVGN 616 ++NS + + E + TP+ ++ ++ +P + + E+E + D ++ +++ +S Sbjct: 197 KNNSIHSDEVNPEVRPDLTPSNENEESKRSAPEIALKEKESTSQDESNREAEEAPISTNY 256 Query: 617 EAPVSNYEEKASQNTHQELTSFKHIQTHL 703 P S+ E++ +N K+ T+L Sbjct: 257 SFPSSSLEDQPDKNVQSSAVENKNKHTNL 285 >SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosaccharomyces pombe|chr 2|||Manual Length = 265 Score = 30.3 bits (65), Expect = 0.35 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%) Frame = +2 Query: 434 ERDNSSPDNVFSTEKLLEN--TPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDDTVLS 607 + +S + V KL+E +P+ DD+ V + R+ D ++ SDD+V S Sbjct: 68 QEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDS 127 Query: 608 VGNEAPVSNYEEKASQNTHQELTS 679 + VS K N+ + + S Sbjct: 128 SNKNSEVSIKRRKTESNSQESVDS 151 >SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pombe|chr 2|||Manual Length = 1692 Score = 27.5 bits (58), Expect = 2.5 Identities = 16/61 (26%), Positives = 24/61 (39%) Frame = +2 Query: 509 RNTESVSPVVEVNEREISVDDGNSCCSDDTVLSVGNEAPVSNYEEKASQNTHQELTSFKH 688 R + PVV R +SV DG V+SV N+ + + E+ + K Sbjct: 1453 RRMDYYGPVVNRTSRVVSVADGGQIAVSAEVVSVLNQLDSETMSSEKTNVNEMEVRALKQ 1512 Query: 689 I 691 I Sbjct: 1513 I 1513 >SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 841 Score = 27.5 bits (58), Expect = 2.5 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +2 Query: 494 PNFDDRNTESVSPVVEVNEREISVDDGN 577 PNFD ++ V +VE+N+ DD N Sbjct: 533 PNFDYLVSDQVHKIVEINDEHADCDDVN 560 >SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 764 Score = 26.6 bits (56), Expect = 4.4 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 455 DNVFSTEKLLENTPNFD-DRNTESVSPVVEVNEREISVDDGNSCCSDDTVLSVGNEAPVS 631 D STE E++ + D D NT+ + + N + S S SD+ VLS GN Sbjct: 345 DEGTSTEANDESSEDDDEDNNTDEANEDAQSNVSDESPKGEGSSHSDNVVLSDGNSVKKM 404 Query: 632 N 634 N Sbjct: 405 N 405 >SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces pombe|chr 1|||Manual Length = 844 Score = 25.8 bits (54), Expect = 7.6 Identities = 10/35 (28%), Positives = 18/35 (51%) Frame = -1 Query: 503 RNSVYSPRAFPSKRHCQGCCCPAPS*ARCGWRKRM 399 R+S+ S +F + C P P A CG+ +++ Sbjct: 509 RSSIESAYSFAHSLGIEASCQPCPENAECGFNRQL 543 >SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces pombe|chr 2|||Manual Length = 412 Score = 25.8 bits (54), Expect = 7.6 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = +2 Query: 458 NVFSTEKLLENTPNFDDRNTESVSPV-VEVNEREISVDDG 574 N + L+ + NFD SVSPV + + +I ++DG Sbjct: 70 NTLCEKPLIRHNNNFDPAEASSVSPVEIVPYQTDIILEDG 109 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,477,342 Number of Sequences: 5004 Number of extensions: 73931 Number of successful extensions: 220 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 209 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 220 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 412451140 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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