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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O10
         (836 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0795 - 32051794-32053362,32053452-32053595,32054102-320549...    34   0.16 
03_01_0642 - 4702726-4703052,4703127-4703193,4703280-4703360,470...    30   2.6  
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968...    29   3.5  
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472...    29   3.5  
11_06_0113 + 20248749-20248944,20249311-20250314                       29   4.6  
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208...    29   4.6  
09_03_0048 + 11880848-11880952,11881030-11881312,11882667-118827...    29   6.1  
07_03_1226 - 24998276-24998375,24998728-24998849,24998936-249997...    28   8.0  
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170...    28   8.0  

>01_06_0795 - 32051794-32053362,32053452-32053595,32054102-32054965,
            32055335-32055892
          Length = 1044

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
 Frame = +2

Query: 419  NVLKKER-DNSSPDNVFSTEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDD 595
            ++L+ E+ +N    NV   + LL  T   + + T S  P VE  + E  +DD +    DD
Sbjct: 765  DLLQPEKIENGILFNVVKRDTLLTPTGGVELQGT-SQEPDVETIQTEC-LDDASD--DDD 820

Query: 596  TVLSVGNEAPVSNYEEKASQNTHQELTSFKHI 691
              L+ G+EA +      +SQNT  + +S ++I
Sbjct: 821  VGLNAGDEAAIDPRANMSSQNTQHQGSSLENI 852


>03_01_0642 -
           4702726-4703052,4703127-4703193,4703280-4703360,
           4703582-4703718,4703936-4704143,4704664-4704891,
           4705310-4705450,4705538-4705794
          Length = 481

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -1

Query: 425 ARCGWRKRMNGCLCLPISHRRGTLDLSCLSCSESMDRH 312
           +RCG + +  G +C P++   G + L CLS ++ +  +
Sbjct: 175 SRCGIKSKRFGNICKPLTWSHGDIFLMCLSSAQILSAY 212


>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
            14397510-14397609
          Length = 2033

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/73 (26%), Positives = 36/73 (49%)
 Frame = +2

Query: 518  ESVSPVVEVNEREISVDDGNSCCSDDTVLSVGNEAPVSNYEEKASQNTHQELTSFKHIQT 697
            +S++   E+  +E+   +G      D  +S    A V  YEEKA +   +      ++ T
Sbjct: 1567 DSLTSSHELLSKEVEQHEGEFVVLMDDAISSSVNAAV--YEEKALELMTENTELKANLST 1624

Query: 698  HLSAISQLSQNMN 736
            H++ I+ LS ++N
Sbjct: 1625 HVALIASLSDHVN 1637


>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
            16547322-16547469,16550080-16550148,16550348-16550509,
            16550625-16550785,16551240-16551324,16552068-16552144,
            16552234-16552441,16555844-16555921,16556463-16556591,
            16556665-16556808,16556893-16557038,16557137-16557293,
            16557391-16557449,16557582-16557741,16557849-16557998,
            16558093-16558229,16558325-16558471,16558556-16558657,
            16558742-16558799,16558895-16558996,16559729-16559766,
            16559868-16559994,16560075-16560245,16560334-16560465,
            16560577-16560686,16560866-16560926,16561031-16561208,
            16561293-16561498,16561590-16561709,16561903-16562001,
            16562152-16562370,16562701-16562840,16563175-16563286,
            16563375-16563425,16563509-16563589,16563683-16563853,
            16563934-16564089,16564174-16564380,16565145-16565215,
            16565315-16565414,16565783-16565839,16566156-16566212,
            16566308-16566388,16566467-16566606,16566641-16566764
          Length = 2041

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = +2

Query: 416  HNVLKKERDNSSPD--NVFSTEKLLE-NTPNFDDR-NTESVSPVVEVNEREISVDDGNSC 583
            H   KK  D  S D   V S ++L   +T  +DD+  T SVSP V  N R +  +D N+ 
Sbjct: 1911 HQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPEVISNMRVLMTEDSNNP 1970

Query: 584  CSDDTVL 604
             S+  +L
Sbjct: 1971 VSNSFLL 1977


>11_06_0113 + 20248749-20248944,20249311-20250314
          Length = 399

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 596 TVLSVGNEAPVSNYEEKASQNTHQELTSFKHI 691
           T+L +G   PV  YE+K+  + + E+T   H+
Sbjct: 24  TILGIGTAVPVHVYEQKSFPDYYFEITDSNHL 55


>03_01_0270 -
           2085461-2086205,2086260-2086339,2086598-2086690,
           2086774-2086881,2087012-2087101,2087234-2087275,
           2087516-2087587,2090848-2090985,2091074-2092624
          Length = 972

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 250 ENENGRRIRPYAGH*DPRPER*RSILSEH--ERHDKSRVPRR*EIGRHKH 393
           + ++GR+      H +PR +R RS   +H  ERHD+S  P   E  RH +
Sbjct: 277 DRKDGRKENAKLHHEEPRSKRRRSTSRDHYQERHDRSVSPSSRE-QRHSY 325


>09_03_0048 +
           11880848-11880952,11881030-11881312,11882667-11882770,
           11883998-11884416,11884698-11884998,11885136-11885232,
           11885719-11885864,11885975-11886103
          Length = 527

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/69 (26%), Positives = 27/69 (39%)
 Frame = -1

Query: 398 NGCLCLPISHRRGTLDLSCLSCSESMDRHRSGLGS*CPAYGRIRRPFSFSVTPSYHLNFI 219
           N  L +P+ H   TL +  +     + R++  L       G+I   F +    S H N  
Sbjct: 346 NHVLVIPVEHCSSTLKMP-VEAEAELGRYKDALAKYFEKQGKIAIYFEWVSQQSRHANLQ 404

Query: 218 VQPYPQQKA 192
             P P  KA
Sbjct: 405 AVPVPLSKA 413


>07_03_1226 -
           24998276-24998375,24998728-24998849,24998936-24999702,
           25000447-25000618
          Length = 386

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 390 ASVHPLSPSTTCLRRSGTTAALTMSFRRKSSWRIH 494
           ASV P+ P+ T L  +G  AAL    RR+   R H
Sbjct: 155 ASVAPVEPAATDLAAAGAGAALPPQRRRRGRGRRH 189


>03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,
            1702358-1702426,1702543-1702657,1702740-1702811,
            1702918-1703016,1703148-1703219,1703394-1703465,
            1704940-1705154,1705277-1705495,1705792-1707076,
            1707270-1707398
          Length = 1068

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
 Frame = +2

Query: 428  KKER--DNSSPDNVFSTEKLLENTPNFDDRNTESV-SPVVEVNEREISVDDGNSCC-SDD 595
            KKE   D+   +++F  +   E + NFDD++TESV       NE +      NS   SDD
Sbjct: 879  KKETYSDHGGSESIFGDKYADETSWNFDDQDTESVWGSNAMNNESDHHGSAHNSFFGSDD 938

Query: 596  ---TVLSVGNEAPVSNYEEKAS 652
                 + VG+ +  S Y +K S
Sbjct: 939  FGVNPVRVGSPSGASTYGKKKS 960


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,629,516
Number of Sequences: 37544
Number of extensions: 496573
Number of successful extensions: 1338
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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