Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O10
(836 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0795 - 32051794-32053362,32053452-32053595,32054102-320549... 34 0.16
03_01_0642 - 4702726-4703052,4703127-4703193,4703280-4703360,470... 30 2.6
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 29 3.5
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 29 3.5
11_06_0113 + 20248749-20248944,20249311-20250314 29 4.6
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 29 4.6
09_03_0048 + 11880848-11880952,11881030-11881312,11882667-118827... 29 6.1
07_03_1226 - 24998276-24998375,24998728-24998849,24998936-249997... 28 8.0
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 28 8.0
>01_06_0795 - 32051794-32053362,32053452-32053595,32054102-32054965,
32055335-32055892
Length = 1044
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +2
Query: 419 NVLKKER-DNSSPDNVFSTEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDD 595
++L+ E+ +N NV + LL T + + T S P VE + E +DD + DD
Sbjct: 765 DLLQPEKIENGILFNVVKRDTLLTPTGGVELQGT-SQEPDVETIQTEC-LDDASD--DDD 820
Query: 596 TVLSVGNEAPVSNYEEKASQNTHQELTSFKHI 691
L+ G+EA + +SQNT + +S ++I
Sbjct: 821 VGLNAGDEAAIDPRANMSSQNTQHQGSSLENI 852
>03_01_0642 -
4702726-4703052,4703127-4703193,4703280-4703360,
4703582-4703718,4703936-4704143,4704664-4704891,
4705310-4705450,4705538-4705794
Length = 481
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 425 ARCGWRKRMNGCLCLPISHRRGTLDLSCLSCSESMDRH 312
+RCG + + G +C P++ G + L CLS ++ + +
Sbjct: 175 SRCGIKSKRFGNICKPLTWSHGDIFLMCLSSAQILSAY 212
>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 518 ESVSPVVEVNEREISVDDGNSCCSDDTVLSVGNEAPVSNYEEKASQNTHQELTSFKHIQT 697
+S++ E+ +E+ +G D +S A V YEEKA + + ++ T
Sbjct: 1567 DSLTSSHELLSKEVEQHEGEFVVLMDDAISSSVNAAV--YEEKALELMTENTELKANLST 1624
Query: 698 HLSAISQLSQNMN 736
H++ I+ LS ++N
Sbjct: 1625 HVALIASLSDHVN 1637
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 416 HNVLKKERDNSSPD--NVFSTEKLLE-NTPNFDDR-NTESVSPVVEVNEREISVDDGNSC 583
H KK D S D V S ++L +T +DD+ T SVSP V N R + +D N+
Sbjct: 1911 HQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPEVISNMRVLMTEDSNNP 1970
Query: 584 CSDDTVL 604
S+ +L
Sbjct: 1971 VSNSFLL 1977
>11_06_0113 + 20248749-20248944,20249311-20250314
Length = 399
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 596 TVLSVGNEAPVSNYEEKASQNTHQELTSFKHI 691
T+L +G PV YE+K+ + + E+T H+
Sbjct: 24 TILGIGTAVPVHVYEQKSFPDYYFEITDSNHL 55
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 250 ENENGRRIRPYAGH*DPRPER*RSILSEH--ERHDKSRVPRR*EIGRHKH 393
+ ++GR+ H +PR +R RS +H ERHD+S P E RH +
Sbjct: 277 DRKDGRKENAKLHHEEPRSKRRRSTSRDHYQERHDRSVSPSSRE-QRHSY 325
>09_03_0048 +
11880848-11880952,11881030-11881312,11882667-11882770,
11883998-11884416,11884698-11884998,11885136-11885232,
11885719-11885864,11885975-11886103
Length = 527
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = -1
Query: 398 NGCLCLPISHRRGTLDLSCLSCSESMDRHRSGLGS*CPAYGRIRRPFSFSVTPSYHLNFI 219
N L +P+ H TL + + + R++ L G+I F + S H N
Sbjct: 346 NHVLVIPVEHCSSTLKMP-VEAEAELGRYKDALAKYFEKQGKIAIYFEWVSQQSRHANLQ 404
Query: 218 VQPYPQQKA 192
P P KA
Sbjct: 405 AVPVPLSKA 413
>07_03_1226 -
24998276-24998375,24998728-24998849,24998936-24999702,
25000447-25000618
Length = 386
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 390 ASVHPLSPSTTCLRRSGTTAALTMSFRRKSSWRIH 494
ASV P+ P+ T L +G AAL RR+ R H
Sbjct: 155 ASVAPVEPAATDLAAAGAGAALPPQRRRRGRGRRH 189
>03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 28.3 bits (60), Expect = 8.0
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Frame = +2
Query: 428 KKER--DNSSPDNVFSTEKLLENTPNFDDRNTESV-SPVVEVNEREISVDDGNSCC-SDD 595
KKE D+ +++F + E + NFDD++TESV NE + NS SDD
Sbjct: 879 KKETYSDHGGSESIFGDKYADETSWNFDDQDTESVWGSNAMNNESDHHGSAHNSFFGSDD 938
Query: 596 ---TVLSVGNEAPVSNYEEKAS 652
+ VG+ + S Y +K S
Sbjct: 939 FGVNPVRVGSPSGASTYGKKKS 960
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,629,516
Number of Sequences: 37544
Number of extensions: 496573
Number of successful extensions: 1338
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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