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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O10
         (836 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_43688| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.29 
SB_37289| Best HMM Match : Herpes_teg_N (HMM E-Value=0.07)             32   0.50 
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)             31   1.2  
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.5  
SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.7  
SB_27305| Best HMM Match : MFMR (HMM E-Value=0.53)                     29   3.5  
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)                29   3.5  
SB_45260| Best HMM Match : RVT_1 (HMM E-Value=1.2)                     29   4.7  
SB_15911| Best HMM Match : Sec7 (HMM E-Value=0)                        29   6.2  
SB_27782| Best HMM Match : Borrelia_orfA (HMM E-Value=0.1)             28   8.2  

>SB_43688| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1200

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +2

Query: 440 DNSSPDNVFSTEKLLENTPNFDDRNTES-VSPVVEVNEREISVDDGNSCCSDDTVLSVGN 616
           D+ +P  +   E   +N  N  D N+ + V P++ +  ++   + G+ CC DDT ++  N
Sbjct: 3   DDQTPAKI-GQEIANDNGENIQDTNSSTEVQPLIGLQSKQELPEKGSDCCLDDTAVN-HN 60

Query: 617 EAPVS 631
             PV+
Sbjct: 61  MTPVN 65


>SB_37289| Best HMM Match : Herpes_teg_N (HMM E-Value=0.07)
          Length = 1248

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +2

Query: 431 KERDNSSPDNVFSTEKLLENTPNFDDRN-TESVSPVVEVNEREISVDDGNSCCSDDTVLS 607
           K+R+N++ D V  T  L    P+ D RN  ++++ + +    ++   D     +DDT L 
Sbjct: 570 KQRENTNGDYVTQT-ALAAELPDKDIRNMADAMNSISQTTSMKVKPSDTIQIGADDTTLL 628

Query: 608 VGNEAPVSNYEEK 646
             +E+ ++  EEK
Sbjct: 629 HKDESKMTTVEEK 641


>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
          Length = 521

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 422 VLKKERDNSSPDNVFSTEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNS-CCSDDT 598
           ++KK  DNS+ +N  S     +N+ +  D +T   S     N    + D+ NS   S D 
Sbjct: 40  IIKKNPDNSTSENSNSYNSTSDNSTS--DNSTSDNSNSDNSNSDNSNTDNSNSDNSSSDN 97

Query: 599 VLSVGNEAPVSNYEEKASQNTHQE 670
             S  + +  SN +   S N++ E
Sbjct: 98  SSSDNSNSDNSNTDNSTSNNSNPE 121



 Score = 28.3 bits (60), Expect = 8.2
 Identities = 18/79 (22%), Positives = 37/79 (46%)
 Frame = +2

Query: 434 ERDNSSPDNVFSTEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDDTVLSVG 613
           ++DNS+P+N  +      +  N D+ N+++ S     N    S D+ NS  S+    +  
Sbjct: 244 KKDNSNPNNSNTDNSSSADNSNPDNSNSDN-SNTDNSNSDNSSSDNSNSDNSNTDNSTSN 302

Query: 614 NEAPVSNYEEKASQNTHQE 670
           N  P ++  + ++ N   +
Sbjct: 303 NSNPENSTSDNSNSNNSNQ 321


>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 253

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = +3

Query: 243 RDGERKWPPYPPICRTLRSKTRAMTIHTLRTRETRQVQSATTMRNRKT*ASVHPLSPSTT 422
           R G       P    T  S TRA +  T RT  T  ++++TT        SV   +PSTT
Sbjct: 104 RTGSTTTTSAPSTSTTSNSTTRAPSTSTPRTGSTITLRTSTT--------SVMTTTPSTT 155

Query: 423 CLRRSGTT 446
            + R+G+T
Sbjct: 156 SISRAGST 163


>SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1488

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +3

Query: 303  TRAMTIHTLRTRETRQVQSATTMRNRKT*ASVHPLSPSTTCLRRSGT 443
            TR ++ HTL    TR + S T  R+     S H LS   TC   S T
Sbjct: 1015 TRTLSSHTLSRPVTRTLSSHTLSRHVTCTLSSHTLSRHVTCTLSSHT 1061



 Score = 29.1 bits (62), Expect = 4.7
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
 Frame = +3

Query: 276  PICRTLRSK------TRAMTIHTLRTRETRQVQSATTMRNRKT*ASVHPLSPSTTC 425
            P+ RTL S       TR ++ HTL    TR + S T  R      S H LS   TC
Sbjct: 951  PVTRTLSSHILSRPVTRTLSSHTLSRPVTRTLSSHTLSRPVTRVISSHTLSRHVTC 1006


>SB_27305| Best HMM Match : MFMR (HMM E-Value=0.53)
          Length = 823

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 605 TTRCRRYSKNYHRPRLFLFHSL 540
           T+ CRR SK +   R FLFHS+
Sbjct: 703 TSVCRRVSKEHKNKRCFLFHSV 724


>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
          Length = 471

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 569 DGNSCCSDDT---VLSVGNEAPVSNYEEKASQNTHQELTSFKHIQTHLSAISQLSQ 727
           DGN   S +T   + SV  E+PV+ YEE A   T +  +S K   +  S   ++S+
Sbjct: 230 DGNIAASQETKRPLSSVKFESPVNEYEEMAVDFTRESYSSEKSCLSPSSPEQEMSE 285


>SB_45260| Best HMM Match : RVT_1 (HMM E-Value=1.2)
          Length = 584

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 561 AWTMVILAVATTPCCQLETRHPYPTTKRKPARIPTK 668
           A+   +L+ + T   Q + +HPY T KR+ A + T+
Sbjct: 15  AFAAFLLSFSATSAFQCQDKHPYYTPKRRKAALLTR 50


>SB_15911| Best HMM Match : Sec7 (HMM E-Value=0)
          Length = 1220

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
 Frame = +2

Query: 467 STEKLLENTPNFDDRNTESVSPVVEVNEREISV--DDGNSCCSDDTVLSVGNEAPVSNYE 640
           S E   E +   +    E  S   E  E + SV  DD NSC ++ T  S G+       +
Sbjct: 342 SKEGTEEESATGEKEQVEQNSTTKEKTENDSSVHEDDPNSCTAESTQSSAGDVKETEEVQ 401

Query: 641 EKASQNT-HQE 670
              +QN+ H E
Sbjct: 402 YAQAQNSGHAE 412


>SB_27782| Best HMM Match : Borrelia_orfA (HMM E-Value=0.1)
          Length = 633

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 20/73 (27%), Positives = 35/73 (47%)
 Frame = +3

Query: 255 RKWPPYPPICRTLRSKTRAMTIHTLRTRETRQVQSATTMRNRKT*ASVHPLSPSTTCLRR 434
           RK+     + RTLR   R     +L TR +R+   ++ +   +T    +  S  T   R+
Sbjct: 379 RKYNTSSLLTRTLRKTMRKHNTSSLLTRTSRKYNKSSLL--TRTSRKYNTSSLLTRTSRK 436

Query: 435 SGTTAALTMSFRR 473
             T++ LT +FR+
Sbjct: 437 YNTSSLLTRTFRK 449


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,788,840
Number of Sequences: 59808
Number of extensions: 609529
Number of successful extensions: 1934
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1927
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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