Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O10
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024882-5|AAF60932.1| 666|Caenorhabditis elegans Hypothetical ... 30 1.8
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 5.4
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 29 5.4
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 29 5.4
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 29 5.4
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 29 5.4
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81037-6|CAB02748.2| 414|Caenorhabditis elegans Hypothetical pr... 28 7.2
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 28 7.2
AC084156-4|AAK68488.2| 251|Caenorhabditis elegans Transforming ... 28 7.2
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 9.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 9.5
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 28 9.5
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 28 9.5
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 28 9.5
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 28 9.5
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 9.5
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 9.5
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 28 9.5
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 9.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 9.5
>AC024882-5|AAF60932.1| 666|Caenorhabditis elegans Hypothetical
protein Y9C9A.8 protein.
Length = 666
Score = 30.3 bits (65), Expect = 1.8
Identities = 39/153 (25%), Positives = 58/153 (37%), Gaps = 4/153 (2%)
Frame = -1
Query: 650 WLSLRSWIRVPRFQLTTRCRRYS-KNYHRPRLFLFHSLQQRDLHSLCFCHRNSVYSPRAF 474
WLS+RS+ +L R S N H+P L + H L +N +
Sbjct: 71 WLSVRSFALGFDLELKEYLRYASHNNIHQPIFKTGFILISINFHFLLLTLKNVKFFNTFR 130
Query: 473 PSKRHCQGCCCPAPS*ARC-GWRKRMNGCLCLPISHRRGTLDLSCLSCSESMDRHRSGLG 297
S G + C WR +G L L + + GT+ L + + M +G
Sbjct: 131 DSINRTYGLDADEITFTGCLFWRTDNHGILYLSVKNTIGTICLGSIMTAIPMIFLFFPIG 190
Query: 296 S*--CPAYGRIRRPFSFSVTPSYHLNFIVQPYP 204
+ P +G FSF VT Y + +V P P
Sbjct: 191 ALFTAPVFGINMEKFSFLVTFFYSMYPMVDPLP 223
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 419 NVLKKERDNSSPDNVFSTEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDDT 598
N ++ R+ ++ S E+ ++ +D N ++V+ + +R+++ D N DD
Sbjct: 1110 NQRRRRREVDYSSDLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMAGLDENDDSMDDV 1169
Query: 599 VL 604
VL
Sbjct: 1170 VL 1171
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 419 NVLKKERDNSSPDNVFSTEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDDT 598
N ++ R+ ++ S E+ ++ +D N ++V+ + +R+++ D N DD
Sbjct: 1110 NQRRRRREVDYSSDLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMAGLDENDDSMDDV 1169
Query: 599 VL 604
VL
Sbjct: 1170 VL 1171
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 564 WTMVILAVATTPCCQLETRHPYPTT 638
WTMV+ V T CC + P+PTT
Sbjct: 926 WTMVL--VTTLSCCSMLWESPWPTT 948
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 564 WTMVILAVATTPCCQLETRHPYPTT 638
WTMV+ V T CC + P+PTT
Sbjct: 904 WTMVL--VTTLSCCSMLWESPWPTT 926
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 564 WTMVILAVATTPCCQLETRHPYPTT 638
WTMV+ V T CC + P+PTT
Sbjct: 926 WTMVL--VTTLSCCSMLWESPWPTT 948
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 419 NVLKKERDNSSPDNVFSTEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDDT 598
N ++ R+ ++ S E+ ++ +D N ++V+ + +R+++ D N DD
Sbjct: 1110 NQRRRRREVDYSSDLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMAGLDENDDSMDDV 1169
Query: 599 VL 604
VL
Sbjct: 1170 VL 1171
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 470 TEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDDTVLSVGNEAPVSNYEEKA 649
TEK++E P S V EV+ EI + + +++ E PV YEE A
Sbjct: 1905 TEKVIETIPAARPSAGPSEGTVAEVSTSEIL----KARPAQESIERTVREVPVDEYEETA 1960
Query: 650 SQNTHQELTSFK 685
+ ++ EL K
Sbjct: 1961 NISSGDELQDHK 1972
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 470 TEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDDTVLSVGNEAPVSNYEEKA 649
TEK++E P S V EV+ EI + + +++ E PV YEE A
Sbjct: 1905 TEKVIETIPAARPSAGPSEGTVAEVSTSEIL----KARPAQESIERTVREVPVDEYEETA 1960
Query: 650 SQNTHQELTSFK 685
+ ++ EL K
Sbjct: 1961 NISSGDELQDHK 1972
>Z81037-6|CAB02748.2| 414|Caenorhabditis elegans Hypothetical
protein C17E4.10 protein.
Length = 414
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 431 KERDNSSPDNVFSTEKLLENTPNFDDRNTESV--SPVVEVNEREI 559
KE N SPD + E E T +FD++ + SP E+ EI
Sbjct: 169 KENKNESPDFIRMVESAPELTTSFDEKEETNYNKSPEQEIEAEEI 213
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 470 TEKLLENTPNFDDRNTESVSPVVEVNEREISVDDGNSCCSDDTVLSVGNEAPVSNYEEKA 649
TEK++E P S V EV+ EI + + +++ E PV YEE A
Sbjct: 1905 TEKVIETIPAARPSAGPSEGTVAEVSTSEIL----KARPAQESIERTVREVPVDEYEETA 1960
Query: 650 SQNTHQELTSFK 685
+ ++ EL K
Sbjct: 1961 NISSGDELQDHK 1972
>AC084156-4|AAK68488.2| 251|Caenorhabditis elegans Transforming
growth factor betafamily protein 3 protein.
Length = 251
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 422 VLKKERDNSSPDNVFSTEKLLENTPNFD 505
++K E NS+ NV + +L N PNFD
Sbjct: 113 MIKIEITNSNTQNVINALSVLRNAPNFD 140
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 329 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 358
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 171 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 200
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 329 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 358
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 171 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 200
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 264 PPYPPICRTLRSKTRAMTIHTLRTRETRQVQSATTMRNRK 383
PP P C TL ++RA RET + ++ NR+
Sbjct: 405 PPTPSACNTLERRSRAFEHEMPEDRETALEKLNRSLHNRR 444
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 381 SDFSSSWHSGLVVSLVFGEYGSSSL-WSWI 295
++FSSSW GL + + Y SS++ W+ I
Sbjct: 202 NNFSSSWRDGLAFNAILHRYRSSAIDWNKI 231
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 264 PPYPPICRTLRSKTRAMTIHTLRTRETRQVQSATTMRNRK 383
PP P C TL ++RA RET + ++ NR+
Sbjct: 405 PPTPSACNTLERRSRAFEHEMPEDRETALEKLNRSLHNRR 444
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,528,986
Number of Sequences: 27780
Number of extensions: 437965
Number of successful extensions: 1366
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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