Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O09
         (835 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.9  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   6.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   6.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 479 SSLTSVPVCKDS*SSTPSVEVPALG-SLPY*WSVSPLTTARSLNWSSPSTPRLRFHCRRR 655
           SSLTS P      S + SV  P++  + PY    SPLT   + +   P  P       R 
Sbjct: 691 SSLTS-PGGMVLPSPSTSVASPSVSVASPY-MLQSPLTPHEAFDVKLPPPPHPHHQPPRN 748

Query: 656 ALQLYPHHPHNPXS 697
            +   PH  +NP S
Sbjct: 749 PVGTNPHDINNPLS 762


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 479 SSLTSVPVCKDS*SSTPSVEVPALG-SLPY*WSVSPLTTARSLNWSSPSTPRLRFHCRRR 655
           SSLTS P      S + SV  P++  + PY    SPLT   + +   P  P       R 
Sbjct: 583 SSLTS-PGGMVLPSPSTSVASPSVSVASPY-MLQSPLTPHEAFDVKLPPPPHPHHQPPRN 640

Query: 656 ALQLYPHHPHNPXS 697
            +   PH  +NP S
Sbjct: 641 PVGTNPHDINNPLS 654


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 487 QRACGFCPKPNLRFPFQWCSDHGHSCW 407
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 412 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 501
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 299 RGTCLPAPVSLKKVLKES 246
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 747 PPXXSTLSAQPTPT 788
           PP    +SAQPTP+
Sbjct: 330 PPPPYQISAQPTPS 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,188
Number of Sequences: 336
Number of extensions: 4510
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)