Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O08
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      28   0.078
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      28   0.078
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.96 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 28.3 bits (60), Expect = 0.078
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 440 PGCFCAFLCHNGDSLL*PAP 381
           PG    F CHNGD L  P P
Sbjct: 120 PGAALPFFCHNGDPLSQPPP 139


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 0.078
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 440 PGCFCAFLCHNGDSLL*PAP 381
           PG    F CHNGD L  P P
Sbjct: 12  PGAALPFFCHNGDPLSQPPP 31


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 150 GIFRSLTVSRHFLYITFYFINTISSILCRFRRENR 46
           G FR        LY  FY+   +  I+C FR + R
Sbjct: 140 GYFREYLAEAVQLYFQFYYTYFLCVIVCIFRGKYR 174


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 539  SWASSPDTALRSMLSGCKVI 480
            SW S P TA   ++ G KVI
Sbjct: 1120 SWVSPPLTAANGVIKGYKVI 1139


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 710 LNSVFREYFKQNWXGHASNIMIQGFPH 630
           L ++F  YF   +   A  IMIQGF +
Sbjct: 382 LINIFASYFAYIFGKFACKIMIQGFSY 408


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 710 LNSVFREYFKQNWXGHASNIMIQGFPH 630
           L ++F  YF   +   A  IMIQGF +
Sbjct: 382 LINIFASYFAYIFGKFACKIMIQGFSY 408


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 710 LNSVFREYFKQNWXGHASNIMIQGFPH 630
           L ++F  YF   +   A  IMIQGF +
Sbjct: 382 LINIFASYFAYIFGKFACKIMIQGFSY 408


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 710 LNSVFREYFKQNWXGHASNIMIQGFPH 630
           L ++F  YF   +   A  IMIQGF +
Sbjct: 382 LINIFASYFAYIFGKFACKIMIQGFSY 408


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 250 PVVGPFFVTGKLPVRCLGPLLVCP 179
           P + P+ +  ++P RC G L  CP
Sbjct: 334 PPLWPYTMYFRMPHRCHGNLQSCP 357



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 582 RNFNPWCEYCSV 547
           +NF PW E C V
Sbjct: 475 KNFEPWREKCVV 486


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 120 HFLYITFYFINTISSILC 67
           HFL  T+YF      +LC
Sbjct: 95  HFLLCTYYFYYAFIILLC 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,837
Number of Sequences: 336
Number of extensions: 4631
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)