Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O08
         (823 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117...    75   7e-14
07_01_0821 + 6631942-6632144,6632155-6632680,6634264-6634619,663...    31   0.84 
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166           31   1.1  
07_03_0820 - 21749477-21749866,21751192-21751590                       30   1.9  
07_01_0827 - 6664723-6665346,6666636-6667559                           29   3.4  
10_08_0157 - 15292774-15293397,15296583-15296804                       29   4.5  
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98...    29   4.5  
11_04_0301 + 16142236-16142945,16143748-16144247,16144557-161446...    29   5.9  
08_01_0812 + 7886057-7886872,7887115-7887702                           29   5.9  

>01_01_0128 -
           1167904-1168749,1168790-1168863,1169419-1169491,
           1171148-1171398,1171442-1171687,1172220-1172415,
           1172796-1172876,1172966-1173169,1173671-1173880,
           1173953-1174174,1174437-1174480,1174974-1175052,
           1175066-1175227,1175337-1175564,1175786-1175815,
           1175905-1176273,1176356-1176571,1177202-1177683,
           1177930-1177975
          Length = 1352

 Score = 74.9 bits (176), Expect = 7e-14
 Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
 Frame = +2

Query: 245 NWSESVLEPIMFKYLELCVDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRYGRGT 424
           +W +  LE IM KY+ELCVDLRK   AK+GL QYR + Q VNV SLE+VI+ +++     
Sbjct: 41  SWQKP-LERIMMKYVELCVDLRKGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFMQLSNEK 99

Query: 425 HRNSQGFIDAGRHRH**SG*PCNRR----AYS*VQCQVKMPRTDLTEQYSHHGLKFLWES 592
              ++    A            ++R      S V  +    R+D   ++     KFLWE+
Sbjct: 100 AEQARNQAQALEDALDVEDLEADKRPEDLMLSYVSGEKGKDRSD--REHVTPWFKFLWET 157

Query: 593 YCQCLELLRTNAHVEXL 643
           Y   LE+LR N+ +E L
Sbjct: 158 YRTVLEILRNNSKLEAL 174



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +1

Query: 490 QPESILLSAVSGEDAQDRSDRTILTPWVEIPLGILLPMPGAPSYECSCGXPCIMILLAW- 666
           +PE ++LS VSGE  +DRSDR  +TPW +        +        +     +  + A  
Sbjct: 124 RPEDLMLSYVSGEKGKDRSDREHVTPWFKFLWETYRTV--LEILRNNSKLEALYAMTAHK 181

Query: 667 PFQFCLKYSRKTEFRKLCD 723
            FQFC +Y R TEFR+LC+
Sbjct: 182 AFQFCKQYKRTTEFRRLCE 200



 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 136 RPENALKRANEFMDLDKPARALDTLQEV 219
           +PENALKRA E + + +   AL  L ++
Sbjct: 6   KPENALKRAEELIHVGQKQAALQALHDL 33


>07_01_0821 +
           6631942-6632144,6632155-6632680,6634264-6634619,
           6634683-6634877,6635419-6635623
          Length = 494

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 19/76 (25%), Positives = 39/76 (51%)
 Frame = +3

Query: 315 LMLQRKVCSSTETCSNQLTLGLWSRL*EAISVMAEERTETARALSTQAVIDTDDLDNLAT 494
           ++L       ++T S  LT  + ++L  ++ VMA+ + +  +A   ++ I  DD+  L+ 
Sbjct: 240 VLLMNIFAGGSDTSSTTLTRTM-AKLIRSLRVMAKVQAKLRQAFQGKSTITEDDIGKLSY 298

Query: 495 GEHTPECSVR*RCPGP 542
            +   + S+R  CP P
Sbjct: 299 FKMVIKESLRLHCPAP 314


>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
          Length = 545

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = +3

Query: 345 TETCSNQLTLGLWSRL*EAISVMAEERTETARALSTQAVIDTDDLDNLATGEHTPECSVR 524
           T+T S  LT  + + L  +  VMA+ + E  +A   +  I  DDL  L+  +   + S+R
Sbjct: 345 TDTSSTTLTWTM-AELIRSPRVMAKAQAEVRQAFEGKNTITEDDLAQLSYLKMVIKESLR 403

Query: 525 *RCPGPI 545
             CP P+
Sbjct: 404 LHCPAPL 410


>07_03_0820 - 21749477-21749866,21751192-21751590
          Length = 262

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +2

Query: 254 ESVLEPIMFKYLELCVDLRKSHVAKEGLFQYRNMFQS---VNVGSLEQVIRGYLRYG 415
           E   +P +F Y +L V L K     E +  + NM       +  +  +VIRG+LRYG
Sbjct: 141 EDWYKPDVFMYKDLIVALAKCKKMDEAMVIWGNMTDENLFPDAQTYAEVIRGFLRYG 197


>07_01_0827 - 6664723-6665346,6666636-6667559
          Length = 515

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 21/77 (27%), Positives = 37/77 (48%)
 Frame = +3

Query: 315 LMLQRKVCSSTETCSNQLTLGLWSRL*EAISVMAEERTETARALSTQAVIDTDDLDNLAT 494
           ++L     + T+T S  L +   + L  +  VMA+ + E  +A   +  I  DDL  L+ 
Sbjct: 305 VLLMDMFAAGTDTSSTTL-IWTMAELIRSPRVMAKAQAEVRQAFEGKNTITEDDLAQLSY 363

Query: 495 GEHTPECSVR*RCPGPI 545
            +   + S+R  CP P+
Sbjct: 364 LKMVIKESLRLHCPVPL 380


>10_08_0157 - 15292774-15293397,15296583-15296804
          Length = 281

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = +3

Query: 318 MLQRKVCSSTETCSNQLTLGLWSRL*EAISVMAEERTETARALSTQAVIDTDDLDNLATG 497
           ++Q    + +ET S  L   + + L ++  VMA+   E  +A   +  I  DD+  L+  
Sbjct: 72  LMQNMFSAGSETSSTTLNWTM-AELIKSPRVMAKVHDEVRQAFQGKNTITDDDVAKLSYL 130

Query: 498 EHTPECSVR*RCPGPI 545
           +   + S+R  CP P+
Sbjct: 131 KMVTKESLRMHCPVPL 146


>02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-989673,
            990244-990510,990840-992458,992571-993327,993560-995506
          Length = 1727

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query: 242  YNWSESVLEPIMFKYLEL--CVDLRKSHVAKEGLFQ 343
            YNWSE+  + I  K+L++  C  L + HV  E L +
Sbjct: 1219 YNWSEAFSQLIALKHLDISKCPSLLQRHVMSEFLHE 1254


>11_04_0301 +
           16142236-16142945,16143748-16144247,16144557-16144649,
           16144879-16145005,16145265-16145468,16145587-16145692
          Length = 579

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +3

Query: 444 LSTQAVIDTDDLDNLATGEHTPECSVR*RCPGPI*QNNTHTMG*NSFGNPTANAWSSFVR 623
           L    ++D DDL NLA    +PE S+  R  G      +++ G NS G    +   +F R
Sbjct: 51  LQEAQILDVDDLTNLALLPPSPEPSLGPRRRGKRIMTPSYSSGGNSKGTRRDSTGDAFNR 110

Query: 624 M 626
           +
Sbjct: 111 L 111


>08_01_0812 + 7886057-7886872,7887115-7887702
          Length = 467

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -3

Query: 662 ASNIMIQGFPHEHSYEGAPGIGSRIPKGISTHGVSIVLSDRSWASSPDTALRSMLSGC 489
           AS + ++G PH+H +    G G   P+  S  G     SD S ASSP  A  ++ S C
Sbjct: 5   ASFMDLEGRPHQHRWSMRRGGGLFFPQISSAAGELGWSSDSSTASSP--APSTLSSSC 60


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,327,359
Number of Sequences: 37544
Number of extensions: 513092
Number of successful extensions: 1188
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)