Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O08
         (823 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    26   0.48 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    26   0.48 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.85 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.6  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   3.4  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   4.5  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   7.9  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
 Frame = -3

Query: 719 QSFLNSVFRE-YFKQNWXGHASNIMIQGFPHEHSYEGAPGIGSRIPKGISTHGVSIVLSD 543
           +S  N +  E Y+ ++   H   + ++G   +HSY G  G GS +          +++SD
Sbjct: 631 ESHWNDLAMEFYYNRSIPDHKRIVKLRGSIIDHSYGGGFGFGSAV----------LLISD 680

Query: 542 RSWASSPDTALRSMLSGCKVIQI-ISVYDGLR 450
           R  +      +R+ LS  + IQI + V +G+R
Sbjct: 681 R-LSRDLYCGIRAGLSWLERIQIALDVLEGIR 711


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
 Frame = -3

Query: 719 QSFLNSVFRE-YFKQNWXGHASNIMIQGFPHEHSYEGAPGIGSRIPKGISTHGVSIVLSD 543
           +S  N +  E Y+ ++   H   + ++G   +HSY G  G GS +          +++SD
Sbjct: 669 ESHWNDLAMEFYYNRSIPDHKRIVKLRGSIIDHSYGGGFGFGSAV----------LLISD 718

Query: 542 RSWASSPDTALRSMLSGCKVIQI-ISVYDGLR 450
           R  +      +R+ LS  + IQI + V +G+R
Sbjct: 719 R-LSRDLYCGIRAGLSWLERIQIALDVLEGIR 749


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 511 SAVSGEDAQDRSDRTILTPWVEI 579
           SA+ G    DRS R +L PW  +
Sbjct: 568 SALGGWHPSDRSARLMLQPWANV 590



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +2

Query: 206 PYRKFSXNKKWAYNWSESVLEPIMFKYLE 292
           P+++      W Y W E +   IM   L+
Sbjct: 619 PHQQHLDQWNWVYEWKELIPSHIMAGLLD 647


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 539  SWASSPDTALRSMLSGCKVIQIIS 468
            SW S P +A   +++G KVI I S
Sbjct: 1101 SWMSPPLSAANGVITGYKVIVIPS 1124


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 6/33 (18%)
 Frame = +1

Query: 604 PGAPSYE----CSCGXPCI--MILLAWPFQFCL 684
           PG P YE    C+C   CI  ++      QFC+
Sbjct: 467 PGTPIYECNKRCNCDIDCINRVVQRGTKMQFCI 499


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 545 LTEQYSHHGLKFLW 586
           L  +Y  HGLKF W
Sbjct: 358 LASKYELHGLKFQW 371


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 563 VSIVLSDRSWASSPDTALRSMLSGCKVIQIISVYD 459
           V+  +   S  SSPD+A    + GC  +   + ++
Sbjct: 381 VAAAVQSSSIVSSPDSARHQRIGGCNGLHTTTAHN 415


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 747 YXQDVSLVITKLSEFCFSRVL*TKLEXP 664
           Y +  SLV TK+    F+RV   K+  P
Sbjct: 225 YEETFSLVFTKIDNEIFNRVPFDKIFPP 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,361
Number of Sequences: 438
Number of extensions: 5586
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)