BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O08 (823 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 77 1e-14 At1g68460.1 68414.m07821 adenylate isopentenyltransferase 1 / cy... 31 1.2 At3g46590.1 68416.m05057 telomere repeat-binding protein, putati... 29 4.9 At5g55893.1 68418.m06968 hypothetical protein 28 6.5 At1g80740.1 68414.m09473 chromomethylase 1 (CMT1) identical to c... 28 6.5 At5g48520.1 68418.m05999 expressed protein similar to unknown pr... 28 8.6 >At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3 subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (p114). [Arabidopsis thaliana] SWISS-PROT:Q9LD55 Length = 987 Score = 77.4 bits (182), Expect = 1e-14 Identities = 51/138 (36%), Positives = 71/138 (51%), Gaps = 4/138 (2%) Frame = +2 Query: 242 YNWSESVLEPIMFKYLELCVDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRYGRG 421 Y + LE IMFKYL+LCVDL++ AK+GL QYR + Q VNV SLE+VI+ +L Sbjct: 39 YRAWQKPLEKIMFKYLDLCVDLKRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFLHLATD 98 Query: 422 THRNSQGFIDAGRHRH**SG*PCNRR----AYS*VQCQVKMPRTDLTEQYSHHGLKFLWE 589 ++ DA +R+ S V + R+D + KFLWE Sbjct: 99 KAEQARSQADALEEALDVDDLEADRKPEDLQLSIVSGEKGKDRSD--RELVTPWFKFLWE 156 Query: 590 SYCQCLELLRTNAHVEXL 643 +Y LE+LR N+ +E L Sbjct: 157 TYRTVLEILRNNSKLEAL 174 Score = 52.0 bits (119), Expect = 5e-07 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Frame = +1 Query: 490 QPESILLSAVSGEDAQDRSDRTILTPWVEIPLGILLPMPGAPSYECSCGXPCIMILLAW- 666 +PE + LS VSGE +DRSDR ++TPW + + + + + A Sbjct: 124 KPEDLQLSIVSGEKGKDRSDRELVTPWFKFLWETYRTV--LEILRNNSKLEALYAMTAHK 181 Query: 667 PFQFCLKYSRKTEFRKLCD 723 FQFC +Y R TEFR+LC+ Sbjct: 182 AFQFCKQYKRTTEFRRLCE 200 Score = 29.5 bits (63), Expect = 2.8 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +1 Query: 118 MARYGQRPENALKRANEFMDLDKPARALDTLQEV 219 MA + +PENALKRA+E +++ + AL L ++ Sbjct: 1 MANFA-KPENALKRADELINVGQKQDALQALHDL 33 >At1g68460.1 68414.m07821 adenylate isopentenyltransferase 1 / cytokinin synthase (IPT1) identical to adenylate isopentenyltransferase (IPT1) [Arabidopsis thaliana] GI:14279054 Length = 357 Score = 30.7 bits (66), Expect = 1.2 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +2 Query: 215 KFSXNKKWAYNWSESVLEP 271 K S KKW NW E VLEP Sbjct: 327 KSSSEKKWRENWEEQVLEP 345 >At3g46590.1 68416.m05057 telomere repeat-binding protein, putative similar to telomere repeat-binding protein TRP1 [Arabidopsis thaliana] gi|5459298|emb|CAB50690 Length = 552 Score = 28.7 bits (61), Expect = 4.9 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Frame = -2 Query: 738 DVSLVITKLSEFCFSRVL*TKLEXPCEQYHDTRXST*AFVRR--SSRHWQ*DSQRNFN-- 571 DV+L + FS + T++ P + D R +R+ +SRHW+ S+ N + Sbjct: 164 DVNLFSRNDDDENFSGYIRTRMTRPVPRIGDRR------IRKILASRHWKGGSKNNTDAK 217 Query: 570 PWCEYCSVRSVLGIFT*HCTQEYALRLQGYPD 475 PW YCS RS + H + Y ++ + Y D Sbjct: 218 PW--YCSKRS---YYLHHHQRSYPIKKRKYFD 244 >At5g55893.1 68418.m06968 hypothetical protein Length = 266 Score = 28.3 bits (60), Expect = 6.5 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +3 Query: 576 NSFGNPTANAWSSFVRMLMWKXLYHDIARMA 668 NSFG+P + WSS +L+ + ++ I++ A Sbjct: 80 NSFGSPLSLTWSSLGTVLVARWIFEHISKTA 110 >At1g80740.1 68414.m09473 chromomethylase 1 (CMT1) identical to chromomethylase GB:AAC02660 GI:2865416 from [Arabidopsis thaliana] Length = 791 Score = 28.3 bits (60), Expect = 6.5 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = +3 Query: 381 WSRL*EAISVMAE-ERTETARALSTQAVIDTDDLDNLATG 497 W RL E S+++ E E+ L + V + DD+D +TG Sbjct: 292 WKRLCEKFSLVSSTEPVESISELEDEEVEENDDIDEASTG 331 >At5g48520.1 68418.m05999 expressed protein similar to unknown protein (gb|AAB97010.1) Length = 671 Score = 27.9 bits (59), Expect = 8.6 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +1 Query: 379 FGAGYKRLSPLWQRNAQKQPGLY 447 F A Y+++S +W RN + G+Y Sbjct: 226 FNAKYRQISSIWGRNFSSEDGIY 248 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,758,173 Number of Sequences: 28952 Number of extensions: 412130 Number of successful extensions: 988 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 962 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 988 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1882599200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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