Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O07
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032606-1|AAH32606.1| 346|Homo sapiens KH domain containing, R... 99 2e-20
AF069681-1|AAC24857.1| 346|Homo sapiens T-Star protein. 99 2e-20
AF051321-1|AAC99294.1| 346|Homo sapiens Sam68-like phosphotyros... 99 2e-20
BC068536-1|AAH68536.1| 345|Homo sapiens KHDRBS3 protein protein. 98 3e-20
AF051322-1|AAC99295.1| 264|Homo sapiens Sam68-like phosphotyros... 96 2e-19
M88108-1|AAA59990.1| 443|Homo sapiens p62 protein. 94 5e-19
BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, R... 94 5e-19
BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein. 94 5e-19
BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, R... 94 5e-19
AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, R... 94 5e-19
AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, R... 94 5e-19
AK091346-1|BAC03643.1| 418|Homo sapiens protein ( Homo sapiens ... 94 5e-19
Z93021-1|CAI21649.1| 349|Homo sapiens KH domain containing, RNA... 93 9e-19
BC034043-1|AAH34043.1| 349|Homo sapiens KH domain containing, R... 93 9e-19
AY077838-1|AAL77219.1| 349|Homo sapiens Sam68-like mammalian pr... 93 9e-19
AL391644-1|CAI15262.1| 349|Homo sapiens KH domain containing, R... 93 9e-19
AL360220-1|CAH70882.1| 349|Homo sapiens KH domain containing, R... 93 9e-19
AL355347-1|CAI14907.1| 349|Homo sapiens KH domain containing, R... 93 9e-19
AL138882-1|CAI19748.1| 349|Homo sapiens KH domain containing, R... 93 9e-19
AL049544-1|CAI19918.1| 349|Homo sapiens KH domain containing, R... 93 9e-19
DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein. 65 3e-10
BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH dom... 65 3e-10
BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein. 65 3e-10
AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein. 65 3e-10
AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH dom... 65 3e-10
AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH dom... 65 3e-10
AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH dom... 65 3e-10
AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH dom... 65 3e-10
AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH dom... 65 3e-10
AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH dom... 65 3e-10
AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens ... 65 3e-10
AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein. 65 3e-10
AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein. 65 3e-10
AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein. 65 3e-10
AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein. 65 3e-10
AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein. 65 3e-10
AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein. 65 3e-10
AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK... 65 3e-10
AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK... 65 3e-10
AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK... 65 3e-10
AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK... 65 3e-10
AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK... 65 3e-10
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 52 2e-06
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 52 2e-06
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 52 2e-06
L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1... 52 2e-06
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 52 2e-06
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 52 2e-06
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 52 2e-06
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 52 2e-06
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 52 2e-06
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 52 2e-06
AJ000051-1|CAA03883.1| 295|Homo sapiens splicing factor SF1 pro... 52 2e-06
U78971-1|AAB47504.1| 404|Homo sapiens Sam68deltaKH protein. 40 0.015
AL445248-1|CAH71944.1| 404|Homo sapiens KH domain containing, R... 40 0.015
AL139249-1|CAI21971.1| 404|Homo sapiens KH domain containing, R... 40 0.015
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 33 1.8
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 33 1.8
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 33 1.8
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 33 1.8
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 33 1.8
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 33 1.8
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 33 1.8
AF448801-1|AAM73808.1| 615|Homo sapiens Dbf4-related factor 1 p... 31 7.1
>BC032606-1|AAH32606.1| 346|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 3 protein.
Length = 346
Score = 99.1 bits (236), Expect = 2e-20
Identities = 49/110 (44%), Positives = 74/110 (67%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXX 436
+Y+ EL++EK L+ S F +++L++QE+ K Q G + KY+DV +
Sbjct: 4 KYLPELMAEKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVL 61
Query: 437 XXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+GSMRD+ KE +
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEE 111
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +1
Query: 490 KRKHYEAITRRHTVQDGCTRQGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
KR E +T+ + G R +AK LR+S + KY HL DDLHV I APPAE
Sbjct: 85 KRLQEETLTKMSILGKGSMRD-----KAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAE 139
Query: 670 TXA 678
A
Sbjct: 140 AYA 142
>AF069681-1|AAC24857.1| 346|Homo sapiens T-Star protein.
Length = 346
Score = 99.1 bits (236), Expect = 2e-20
Identities = 49/110 (44%), Positives = 74/110 (67%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXX 436
+Y+ EL++EK L+ S F +++L++QE+ K Q G + KY+DV +
Sbjct: 4 KYLPELMAEKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVL 61
Query: 437 XXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+GSMRD+ KE +
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEE 111
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +1
Query: 490 KRKHYEAITRRHTVQDGCTRQGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
KR E +T+ + G R +AK LR+S + KY HL DDLHV I APPAE
Sbjct: 85 KRLQEETLTKMSILGKGSMRD-----KAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAE 139
Query: 670 TXA 678
A
Sbjct: 140 AYA 142
>AF051321-1|AAC99294.1| 346|Homo sapiens Sam68-like phosphotyrosine
protein alpha protein.
Length = 346
Score = 99.1 bits (236), Expect = 2e-20
Identities = 49/110 (44%), Positives = 74/110 (67%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXX 436
+Y+ EL++EK L+ S F +++L++QE+ K Q G + KY+DV +
Sbjct: 4 KYLPELMAEKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVL 61
Query: 437 XXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+GSMRD+ KE +
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEE 111
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +1
Query: 490 KRKHYEAITRRHTVQDGCTRQGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
KR E +T+ + G R +AK LR+S + KY HL DDLHV I APPAE
Sbjct: 85 KRLQEETLTKMSILGKGSMRD-----KAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAE 139
Query: 670 TXA 678
A
Sbjct: 140 AYA 142
>BC068536-1|AAH68536.1| 345|Homo sapiens KHDRBS3 protein protein.
Length = 345
Score = 98.3 bits (234), Expect = 3e-20
Identities = 49/110 (44%), Positives = 74/110 (67%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXX 436
+Y+ EL++EK L+ S F +++L++QE+ K Q K+ KY+DV +
Sbjct: 4 KYLPELMAEKDSLDPS-FTHALRLVNQEIEKFQKGEG--KEEKYIDVVINKNMKLGQKVL 60
Query: 437 XXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+GSMRD+ KE +
Sbjct: 61 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEE 110
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +1
Query: 490 KRKHYEAITRRHTVQDGCTRQGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
KR E +T+ + G R +AK LR+S + KY HL DDLHV I APPAE
Sbjct: 84 KRLQEETLTKMSILGKGSMRD-----KAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAE 138
Query: 670 TXA 678
A
Sbjct: 139 AYA 141
>AF051322-1|AAC99295.1| 264|Homo sapiens Sam68-like phosphotyrosine
protein beta protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-19
Identities = 48/106 (45%), Positives = 71/106 (66%)
Frame = +2
Query: 269 ELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXX 448
EL++EK L+ S F +++L++QE+ K Q G + KY+DV +
Sbjct: 1 ELMAEKDSLDPS-FTHALRLVNQEIEKFQ-KGEGKDEEKYIDVVINKNMKLGQKVLIPVK 58
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+GSMRD+ KE +
Sbjct: 59 QFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEE 104
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +1
Query: 490 KRKHYEAITRRHTVQDGCTRQGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
KR E +T+ + G R +AK LR+S + KY HL DDLHV I APPAE
Sbjct: 78 KRLQEETLTKMSILGKGSMRD-----KAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAE 132
Query: 670 TXA 678
A
Sbjct: 133 AYA 135
>M88108-1|AAA59990.1| 443|Homo sapiens p62 protein.
Length = 443
Score = 94.3 bits (224), Expect = 5e-19
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 245 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 418
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 419 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KE +
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEE 211
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAETXA 678
+G +AK LR+ DPKY+HL DLHV I PP E A
Sbjct: 200 KGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 242
>BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 94.3 bits (224), Expect = 5e-19
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 245 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 418
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 419 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KE +
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEE 211
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAETXA 678
+G +AK LR+ DPKY+HL DLHV I PP E A
Sbjct: 200 KGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 242
>BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein.
Length = 381
Score = 94.3 bits (224), Expect = 5e-19
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 245 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 418
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 419 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KE +
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEE 211
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAETXA 678
+G +AK LR+ DPKY+HL DLHV I PP E A
Sbjct: 200 KGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 242
>BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 94.3 bits (224), Expect = 5e-19
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 245 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 418
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 419 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KE +
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEE 211
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAETXA 678
+G +AK LR+ DPKY+HL DLHV I PP E A
Sbjct: 200 KGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 242
>AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 94.3 bits (224), Expect = 5e-19
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 245 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 418
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 419 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KE +
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEE 211
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAETXA 678
+G +AK LR+ DPKY+HL DLHV I PP E A
Sbjct: 200 KGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 242
>AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 94.3 bits (224), Expect = 5e-19
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 245 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 418
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 98 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 155
Query: 419 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KE +
Sbjct: 156 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEE 211
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAETXA 678
+G +AK LR+ DPKY+HL DLHV I PP E A
Sbjct: 200 KGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 242
>AK091346-1|BAC03643.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ34027 fis, clone FCBBF2003549, highly similar to
GAP-associated tyrosine phosphoprotein p62 (Sam68). ).
Length = 418
Score = 94.3 bits (224), Expect = 5e-19
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 245 EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSK--YVDVFRDXXXX 418
E +Y+ EL++EK L+ S F +M+L+ E+ K+Q G KD + Y+D+F
Sbjct: 73 EPENKYLPELMAEKDSLDPS-FTHAMQLLTAEIEKIQ-KGDSKKDDEENYLDLFSHKNMK 130
Query: 419 XXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KE +
Sbjct: 131 LKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEE 186
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAETXA 678
+G +AK LR+ DPKY+HL DLHV I PP E A
Sbjct: 175 KGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 217
>Z93021-1|CAI21649.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 93.5 bits (222), Expect = 9e-19
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 430
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 431 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KE +
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEE 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
+G +AK LR+S + KY+HL+D+LHV I APP E
Sbjct: 104 KGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGE 143
>BC034043-1|AAH34043.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 93.5 bits (222), Expect = 9e-19
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 430
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 431 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KE +
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEE 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
+G +AK LR+S + KY+HL+D+LHV I APP E
Sbjct: 104 KGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGE 143
>AY077838-1|AAL77219.1| 349|Homo sapiens Sam68-like mammalian
protein 1 protein.
Length = 349
Score = 93.5 bits (222), Expect = 9e-19
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 430
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 431 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KE +
Sbjct: 64 VPIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEE 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
+G +AK LR+S + KY+HL+D+LHV I APP E
Sbjct: 104 KGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGE 143
>AL391644-1|CAI15262.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 93.5 bits (222), Expect = 9e-19
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 430
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 431 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KE +
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEE 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
+G +AK LR+S + KY+HL+D+LHV I APP E
Sbjct: 104 KGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGE 143
>AL360220-1|CAH70882.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 93.5 bits (222), Expect = 9e-19
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 430
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 431 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KE +
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEE 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
+G +AK LR+S + KY+HL+D+LHV I APP E
Sbjct: 104 KGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGE 143
>AL355347-1|CAI14907.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 93.5 bits (222), Expect = 9e-19
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 430
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 431 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KE +
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEE 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
+G +AK LR+S + KY+HL+D+LHV I APP E
Sbjct: 104 KGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGE 143
>AL138882-1|CAI19748.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 93.5 bits (222), Expect = 9e-19
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 430
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 431 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KE +
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEE 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
+G +AK LR+S + KY+HL+D+LHV I APP E
Sbjct: 104 KGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGE 143
>AL049544-1|CAI19918.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 93.5 bits (222), Expect = 9e-19
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 EYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDS--KYVDVFRDXXXXXXXX 430
+Y+ EL++EK L+ S F + +L+ +E+ K Q S +D KY+DV +
Sbjct: 5 KYLPELMAEKDSLDPS-FVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSER 63
Query: 431 XXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KE +
Sbjct: 64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEE 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 550 QGLNERQAKRXRLRQSLDPKYSHLADDLHVEISAIAPPAE 669
+G +AK LR+S + KY+HL+D+LHV I APP E
Sbjct: 104 KGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGE 143
>DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein.
Length = 333
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein.
Length = 293
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 44 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 87
>AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein.
Length = 313
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 131
>AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ14403 fis, clone HEMBA1003805, highly similar to
Mus musculus KH domain RNA binding protein QKI-5A mRNA.
).
Length = 323
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 74 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 117
>AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein.
Length = 341
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 114 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 157
>AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein.
Length = 337
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 131
>AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein.
Length = 315
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 131
>AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein.
Length = 363
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 114 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 157
>AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein.
Length = 347
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 114 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 157
>AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein.
Length = 321
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 88 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 131
>AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK
protein.
Length = 325
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK-7B
protein.
Length = 319
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK-7
protein.
Length = 325
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK-6
protein.
Length = 319
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK-5
protein.
Length = 341
Score = 65.3 bits (152), Expect = 3e-10
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
E+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KE
Sbjct: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1
protein.
Length = 571
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 214 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 273
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 274 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 310
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>AJ000051-1|CAA03883.1| 295|Homo sapiens splicing factor SF1
protein.
Length = 295
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Frame = +2
Query: 278 SEKIKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHP 457
SE +LN +F KL ++ + + D K ++ E+P
Sbjct: 89 SEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYP 148
Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 149 EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>U78971-1|AAB47504.1| 404|Homo sapiens Sam68deltaKH protein.
Length = 404
Score = 39.5 bits (88), Expect = 0.015
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 574 KRXRLRQSLDPKYSHLADDLHVEISAIAPPAETXA 678
K LR+ DPKY+HL DLHV I PP E A
Sbjct: 169 KEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 203
>AL445248-1|CAH71944.1| 404|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 404
Score = 39.5 bits (88), Expect = 0.015
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 574 KRXRLRQSLDPKYSHLADDLHVEISAIAPPAETXA 678
K LR+ DPKY+HL DLHV I PP E A
Sbjct: 169 KEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 203
>AL139249-1|CAI21971.1| 404|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 404
Score = 39.5 bits (88), Expect = 0.015
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 574 KRXRLRQSLDPKYSHLADDLHVEISAIAPPAETXA 678
K LR+ DPKY+HL DLHV I PP E A
Sbjct: 169 KEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 203
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +2
Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKMAV 544
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKIEQDTDTKITI 312
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +2
Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKMAV 544
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKIEQDTDTKITI 312
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +2
Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKMAV 544
NFVG+L+G +G +K++++DT K+ +
Sbjct: 147 NFVGRLIGKEGRNLKKVEQDTETKITI 173
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +2
Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKMAV 544
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKIEQDTDTKITI 312
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +2
Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKMAV 544
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITI 312
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +2
Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKMAV 544
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKIEQDTDTKITI 312
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +2
Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKMAV 544
NFVG+L+G +G +K++++DT K+ +
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITI 312
>AF448801-1|AAM73808.1| 615|Homo sapiens Dbf4-related factor 1
protein.
Length = 615
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Frame = +1
Query: 466 LCGKTIRSKR-KHYEAITRRHTVQDGCTRQGLNERQAKRXRLRQSLDPKYSHLADDLHVE 642
LC +T+ + H A + R +D C R A + R +SLD A V
Sbjct: 367 LCPETLHPHQPSHPRAASPRIRKEDSCQASVTQGRAAGQQRWTESLDGVMGPPASHTCVS 426
Query: 643 ISAIAP--PAETXAPNCICXCXKS 708
+ + P P + C+C C S
Sbjct: 427 ATTLLPALPKGSREQGCLCPCPAS 450
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,263,849
Number of Sequences: 237096
Number of extensions: 2035654
Number of successful extensions: 8722
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 8064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8641
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -