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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O07
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000197-7|AAU20839.1|  445|Caenorhabditis elegans Star (rna bin...    77   1e-14
AF000197-8|AAB52897.2|  328|Caenorhabditis elegans Star (rna bin...    76   3e-14
AF000197-6|AAP68907.1|  403|Caenorhabditis elegans Star (rna bin...    76   3e-14
Z81130-2|CAB03417.1|  463|Caenorhabditis elegans Hypothetical pr...    68   1e-11
U20535-1|AAC46632.1|  463|Caenorhabditis elegans gld-1 protein.        68   1e-11
AF106574-2|AAM81088.1|  315|Caenorhabditis elegans Hypothetical ...    60   3e-09
AF106574-1|AAY44015.1|  317|Caenorhabditis elegans Hypothetical ...    60   3e-09
AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical...    52   4e-07
AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical...    50   3e-06
AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein p...    50   3e-06
Z99281-18|CAD56258.1|  380|Caenorhabditis elegans Hypothetical p...    49   5e-06
AF047659-9|AAC04421.1|  254|Caenorhabditis elegans Hypothetical ...    47   1e-05
U10438-13|ABB88243.1|  235|Caenorhabditis elegans Hypothetical p...    45   6e-05
Z77132-1|CAB00859.1|  278|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z73969-19|CAJ43440.1|  548|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z73969-2|CAA98233.1|  611|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z73969-1|CAA98232.1|  589|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U67864-1|AAC47313.1|  415|Caenorhabditis elegans MEX-3 protein.        30   2.4  
AF003139-9|AAK73872.1|  415|Caenorhabditis elegans Muscle excess...    30   2.4  
AF003139-8|AAK73873.2|  443|Caenorhabditis elegans Muscle excess...    30   2.4  
Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AF039052-4|AAF98630.1|  981|Caenorhabditis elegans Proteasome re...    29   4.2  
U80453-5|AAK31443.1|  378|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>AF000197-7|AAU20839.1|  445|Caenorhabditis elegans Star (rna
           binding protein) familyprotein 2, isoform c protein.
          Length = 445

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
 Frame = +2

Query: 155 GYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKL 328
           G +SG  +   T    +    NG    +  + + EY+ +LL +K +L    + F    +L
Sbjct: 37  GPSSGPPQVTITPSGVQSGSANGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERL 96

Query: 329 IDQEVTKVQA---SGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGN 499
            D+E+ KV+        +K+S  +                   EHP +NFVG++LGP+G 
Sbjct: 97  ADEEINKVRVVLFQCEFSKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGM 156

Query: 500 TMKQLQEDTLCKMAVLGRGSMRDRQKE 580
           T KQL+++T CK+ V GRGSMRD++KE
Sbjct: 157 TAKQLEQETGCKIMVRGRGSMRDKKKE 183


>AF000197-8|AAB52897.2|  328|Caenorhabditis elegans Star (rna
           binding protein) familyprotein 2, isoform a protein.
          Length = 328

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
 Frame = +2

Query: 218 NGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKLIDQEVTKVQA---SGRITKDS 382
           NG    +  + + EY+ +LL +K +L    + F    +L D+E+ KV+        +K+S
Sbjct: 16  NGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERLADEEINKVRVVLFQCEFSKES 75

Query: 383 KYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSM 562
             +                   EHP +NFVG++LGP+G T KQL+++T CK+ V GRGSM
Sbjct: 76  APLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSM 135

Query: 563 RDRQKE 580
           RD++KE
Sbjct: 136 RDKKKE 141


>AF000197-6|AAP68907.1|  403|Caenorhabditis elegans Star (rna
           binding protein) familyprotein 2, isoform b protein.
          Length = 403

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
 Frame = +2

Query: 218 NGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKLIDQEVTKVQA---SGRITKDS 382
           NG    +  + + EY+ +LL +K +L    + F    +L D+E+ KV+        +K+S
Sbjct: 16  NGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERLADEEINKVRVVLFQCEFSKES 75

Query: 383 KYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSM 562
             +                   EHP +NFVG++LGP+G T KQL+++T CK+ V GRGSM
Sbjct: 76  APLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSM 135

Query: 563 RDRQKE 580
           RD++KE
Sbjct: 136 RDKKKE 141


>Z81130-2|CAB03417.1|  463|Caenorhabditis elegans Hypothetical
           protein T23G11.3 protein.
          Length = 463

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = +2

Query: 245 EKAGEYMRELLSEK--IKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKY-VDVFRDXXX 415
           E   EY+ +L+ EK  + L    F    +L+D E+ +V+ +   T+  +  +        
Sbjct: 144 EATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVALFQTEFPRVELPEPAGDMI 203

Query: 416 XXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
                      E+P +NFVG++LGP+G T KQL++DT CK+ V G+GSMRD+ KE
Sbjct: 204 SITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKE 258


>U20535-1|AAC46632.1|  463|Caenorhabditis elegans gld-1 protein.
          Length = 463

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = +2

Query: 245 EKAGEYMRELLSEK--IKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKY-VDVFRDXXX 415
           E   EY+ +L+ EK  + L    F    +L+D E+ +V+ +   T+  +  +        
Sbjct: 144 EATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVALFQTEFPRVELPEPAGDMI 203

Query: 416 XXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
                      E+P +NFVG++LGP+G T KQL++DT CK+ V G+GSMRD+ KE
Sbjct: 204 SITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKE 258


>AF106574-2|AAM81088.1|  315|Caenorhabditis elegans Hypothetical
           protein E02D9.1b protein.
          Length = 315

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = +2

Query: 452 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
           HP FNF+GK+LGPKG T++ L +   C + +LGRGS +DR+KE +
Sbjct: 140 HPNFNFIGKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAE 184



 Score = 34.7 bits (76), Expect = 0.085
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = +1

Query: 472 GKTIRSKRKHYEAITRRHTVQDGCTRQGLNERQAKRXRLRQSLDPKYSHLADDLHVEISA 651
           GK +  K    + + + H        +G  + + K   L  S DP+++H +  LHV++  
Sbjct: 147 GKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAELLASGDPQHAHFSGPLHVKVET 206

Query: 652 IAP 660
           +AP
Sbjct: 207 VAP 209


>AF106574-1|AAY44015.1|  317|Caenorhabditis elegans Hypothetical
           protein E02D9.1c protein.
          Length = 317

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = +2

Query: 452 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEXD 586
           HP FNF+GK+LGPKG T++ L +   C + +LGRGS +DR+KE +
Sbjct: 140 HPNFNFIGKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAE 184



 Score = 34.7 bits (76), Expect = 0.085
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = +1

Query: 472 GKTIRSKRKHYEAITRRHTVQDGCTRQGLNERQAKRXRLRQSLDPKYSHLADDLHVEISA 651
           GK +  K    + + + H        +G  + + K   L  S DP+++H +  LHV++  
Sbjct: 147 GKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAELLASGDPQHAHFSGPLHVKVET 206

Query: 652 IAP 660
           +AP
Sbjct: 207 VAP 209


>AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32a protein.
          Length = 384

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 20/37 (54%), Positives = 32/37 (86%)
 Frame = +2

Query: 449 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGS 559
           ++PK+NFVG++LGP+G T+KQL+++T C++ V GR S
Sbjct: 81  KYPKYNFVGRILGPRGMTVKQLEKETGCRIFVRGRAS 117


>AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical
           protein Y116A8C.32 protein.
          Length = 699

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 27/93 (29%), Positives = 46/93 (49%)
 Frame = +2

Query: 290 KLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 469
           +LN  +     +L      K+QA  +I  + K    +R               + P  NF
Sbjct: 260 RLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPNIRLHDKVWIPQEQFPDLNF 319

Query: 470 VGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
           VG L+GP+GNT+K L+ +T  K+ + G+GS+++
Sbjct: 320 VGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKE 352


>AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein
           protein.
          Length = 699

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 27/93 (29%), Positives = 46/93 (49%)
 Frame = +2

Query: 290 KLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 469
           +LN  +     +L      K+QA  +I  + K    +R               + P  NF
Sbjct: 260 RLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPNIRLHDKVWIPQEQFPDLNF 319

Query: 470 VGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 568
           VG L+GP+GNT+K L+ +T  K+ + G+GS+++
Sbjct: 320 VGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKE 352


>Z99281-18|CAD56258.1|  380|Caenorhabditis elegans Hypothetical
           protein Y57G11C.36 protein.
          Length = 380

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
 Frame = +2

Query: 122 LIKMADKYDKNGYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKL-- 295
           L+++A+K+  +   +     ++ +      + + +E  K       Y+  L  EK +L  
Sbjct: 14  LLRLAEKHQHSSLLTPPPSDDSQKSLKSTSNHSDQEMSKNLHDVEAYIDALKGEKHQLAQ 73

Query: 296 -NNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNFV 472
            ++  F     LID+E+ KV  +      S+                     + P +NFV
Sbjct: 74  YSSGGFNHVFNLIDKEIQKVGGNDAHDGGSQ----MSGDGSMLTETIMVPVEKFPDYNFV 129

Query: 473 GKLLGPKGNTMKQLQEDTLCKMAVLGR 553
           G+LLGP+G T KQL+  T C++ +LGR
Sbjct: 130 GRLLGPRGTTAKQLEVTTGCRITILGR 156


>AF047659-9|AAC04421.1|  254|Caenorhabditis elegans Hypothetical
           protein K07H8.9 protein.
          Length = 254

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 16/36 (44%), Positives = 28/36 (77%)
 Frame = +2

Query: 452 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGS 559
           +P +NF+G+++GP+G T KQL++DT C++ + G  S
Sbjct: 132 YPTYNFIGRIIGPRGTTAKQLEKDTGCRIMIRGNHS 167


>U10438-13|ABB88243.1|  235|Caenorhabditis elegans Hypothetical
           protein B0280.17 protein.
          Length = 235

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 18/39 (46%), Positives = 29/39 (74%)
 Frame = +2

Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKE 580
           N VG+L+GP+G T++QL++D  CK+ + G+G  +D  KE
Sbjct: 129 NPVGRLIGPRGMTIRQLEKDLGCKLFIRGKGCTKDDAKE 167


>Z77132-1|CAB00859.1|  278|Caenorhabditis elegans Hypothetical
           protein F54D1.1 protein.
          Length = 278

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 11/38 (28%), Positives = 24/38 (63%)
 Frame = +2

Query: 458 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDR 571
           K N++G++LGP G + + ++      + + G GS+R++
Sbjct: 151 KCNYIGRILGPSGMSARMIENQYDVTLLIRGAGSVRNK 188


>Z73969-19|CAJ43440.1|  548|Caenorhabditis elegans Hypothetical
           protein C12D8.1c protein.
          Length = 548

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKM-AVLGRGSMRDRQK 577
           N  G ++G  G+T++QLQE + CKM  V    S+ D+ K
Sbjct: 101 NRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSK 139


>Z73969-2|CAA98233.1|  611|Caenorhabditis elegans Hypothetical
           protein C12D8.1b protein.
          Length = 611

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKM-AVLGRGSMRDRQK 577
           N  G ++G  G+T++QLQE + CKM  V    S+ D+ K
Sbjct: 164 NRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSK 202


>Z73969-1|CAA98232.1|  589|Caenorhabditis elegans Hypothetical
           protein C12D8.1a protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 464 NFVGKLLGPKGNTMKQLQEDTLCKM-AVLGRGSMRDRQK 577
           N  G ++G  G+T++QLQE + CKM  V    S+ D+ K
Sbjct: 142 NRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSK 180


>U67864-1|AAC47313.1|  415|Caenorhabditis elegans MEX-3 protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +2

Query: 470 VGKLLGPKGNTMKQLQEDT 526
           VG ++GPKG T+K++Q+DT
Sbjct: 148 VGLVVGPKGATIKRIQQDT 166


>AF003139-9|AAK73872.1|  415|Caenorhabditis elegans Muscle excess
           protein 3, isoform a protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +2

Query: 470 VGKLLGPKGNTMKQLQEDT 526
           VG ++GPKG T+K++Q+DT
Sbjct: 148 VGLVVGPKGATIKRIQQDT 166


>AF003139-8|AAK73873.2|  443|Caenorhabditis elegans Muscle excess
           protein 3, isoform b protein.
          Length = 443

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +2

Query: 470 VGKLLGPKGNTMKQLQEDT 526
           VG ++GPKG T+K++Q+DT
Sbjct: 176 VGLVVGPKGATIKRIQQDT 194


>Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical
           protein C14B1.6 protein.
          Length = 793

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 564 LIEPLPSTAILHSVSSCNCFIVFPF 490
           L+EP+    I H V  CNC++  PF
Sbjct: 746 LLEPIYRAYINHFVDECNCYLKGPF 770


>AF039052-4|AAF98630.1|  981|Caenorhabditis elegans Proteasome
           regulatory particle,non-atpase-like protein 1 protein.
          Length = 981

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 185 TTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQAS 361
           TTQ  P+E D+   +  K+ EKA     E+  E  KL      L  +L + + T  + S
Sbjct: 4   TTQQTPKEADKKKADDKKVPEKAEPKKEEMSEEDQKLEEDLNLLVQRLSEPDTTLYKPS 62


>U80453-5|AAK31443.1|  378|Caenorhabditis elegans Hypothetical
           protein C23H3.3 protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 467 FVGKLLGPKGNTMKQLQEDTLCKM 538
           F+GKL+G    T+  L+ +T C++
Sbjct: 111 FIGKLIGTNRRTLNSLENETQCRV 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,314,696
Number of Sequences: 27780
Number of extensions: 325997
Number of successful extensions: 801
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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