Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O06
(859 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 283 1e-76
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 34 0.17
SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0) 26 0.68
SB_31207| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_23350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 29 3.7
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 29 4.8
SB_14427| Best HMM Match : Cadherin (HMM E-Value=0) 29 4.8
SB_23808| Best HMM Match : zf-AN1 (HMM E-Value=5.5) 29 6.4
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 28 8.5
SB_21446| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_13625| Best HMM Match : Reprolysin (HMM E-Value=2.3e-15) 28 8.5
SB_13496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_25665| Best HMM Match : TolA (HMM E-Value=1.7) 28 8.5
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 283 bits (695), Expect = 1e-76
Identities = 132/209 (63%), Positives = 155/209 (74%)
Frame = +3
Query: 177 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 356
LP VFKAPIRPDLVN VH +++KN RQPY V+K AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 21 LPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNKLAGHQTSAESWGTGRAVARIPRVRGGG 80
Query: 357 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 536
THRSGQGAFGNMCRGGRMFAPTK WR+WH ARGH
Sbjct: 81 THRSGQGAFGNMCRGGRMFAPTKTWRKWHTKVNVQQRRFAVCSALAASALPALIMARGHR 140
Query: 537 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 716
IEKI E+PLV++D ++ + KT AV L+ + A+ D+ K S+++RAGKGKMRNRR +
Sbjct: 141 IEKIAEVPLVISDAIESVTKTSAAVKLLKAVNAYEDVEKCIDSKKIRAGKGKMRNRRTVM 200
Query: 717 RKGPLIIFNKDQGLTRAFRNIPGVELLNV 803
RKGPLII+N DQGL +AFRN+PGVEL +V
Sbjct: 201 RKGPLIIYNNDQGLRQAFRNLPGVELQHV 229
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 402 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWF 289
HH CY H Y Y+ H H + + H YP RH++
Sbjct: 20 HHYCCYCHH---RYCYYRHHHYCWYRHHYHYPCYRHYY 54
>SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 818
Score = 26.2 bits (55), Expect(2) = 0.68
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = -3
Query: 641 RPCL-EAPQEDDSLFG-----LVDLLDFVGYNQGKLGNLFNNVSSSLNERWDASSSNGCC 480
+PCL + E S+ G + DLL F+ Q + + N ++ + W+A + + C
Sbjct: 567 KPCLNKGGFESSSIIGDEDEYMKDLLSFLKPVQQSPTSWWGNCYTASRDGWEAKTFHQKC 626
Query: 479 QGRSP 465
G+ P
Sbjct: 627 DGKGP 631
Score = 24.2 bits (50), Expect(2) = 0.68
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3
Query: 833 PEPASGGSACXIQELHTRDVAESASQTLILV 741
P+PA+GG C E T+ + +I +
Sbjct: 530 PKPANGGQECKGDETETKACGTKKCEVIICI 560
>SB_31207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 710 TTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDDSLFGLVDLLDFVGYNQ 561
+T + HF KT R +H+K P E GL+D+LD G+ Q
Sbjct: 18 STVLHHFIDKHAKTPRFLHMKP-----NGPGEGGGSSGLLDMLDAAGFEQ 62
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 387 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQ 280
Y +HP T+ YHH H + ++ ++P + H + Q
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTHRYHQQ 447
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 387 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 274
Y +HP T+ YH H + H ++P + H + Q P
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTHRYQYQHP 268
>SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 361 WVPPPRTRGIRATARPVPHD 302
W+PP RTR R T PV H+
Sbjct: 228 WMPPVRTRPARPTVMPVTHE 247
>SB_23350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 704
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -3
Query: 827 PASGGSACX---IQELHTRDVAESASQTLILVEDYEGSLTLDTTTVAHFTLTSTKTL 666
P G +C + E+ R + Q LIL+ Y + L+T+++ F+L S KT+
Sbjct: 210 PCPGNCSCSGEAVNEIRCRK-QDILPQELILIPYYTEKVALETSSLIEFSLLSAKTI 265
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 402 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRY 310
HH RH R + +HHH H E+ ++H RY
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRH-RY 353
>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 411 TYVHHDTCYRRHPDRTYGYHHHGHA 337
TY H DT R+HPD H HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 291 TSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 407
T +E +G ++ R PR RGGG G G G RGGR
Sbjct: 983 TPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_14427| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2325
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 210 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARI 335
D+ NDV ++++ + PY + H T E TG+ +A++
Sbjct: 2034 DVTNDVTINVTDVNEAPYDIRLVPSHVTVKEDIRTGQCIAQV 2075
>SB_23808| Best HMM Match : zf-AN1 (HMM E-Value=5.5)
Length = 165
Score = 28.7 bits (61), Expect = 6.4
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 830 EPASGGSACXIQEL-HTRDVAESASQTLILVEDYE--GSLTLDTTTVAHFTLTSTKTLRL 660
E AS S E T AE+A + +E+ G + + T STK LR
Sbjct: 83 ETASSSSVFFQPETSETSAAAEAALEPFQDIEETSALGQILPSSVDAVRLTKASTK-LRD 141
Query: 659 VHLKDIRPCLEAPQEDDSLFG 597
+ LKDI C+E +D+ FG
Sbjct: 142 IELKDIERCIEV---EDTAFG 159
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 309 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 437
G GR + R P GGG R G +G M GG P W R
Sbjct: 271 GQGRGMGRGP---GGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 310
>SB_21446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 28.3 bits (60), Expect = 8.5
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 830 EPASGGSACXIQEL-HTRDVAESASQTLILVEDYE--GSLTLDTTTVAHFTLTSTKTLRL 660
E AS S E T AESA + +E+ G + + STK LR
Sbjct: 81 ETASSSSVFFQPETSETSAAAESALEPFQDIEETSALGQILPSSVDAVRLMKASTK-LRD 139
Query: 659 VHLKDIRPCLEAPQEDDSLFG 597
+ LKDI+ C+E +D+ FG
Sbjct: 140 IELKDIKRCIEV---EDTAFG 157
>SB_13625| Best HMM Match : Reprolysin (HMM E-Value=2.3e-15)
Length = 715
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 204 RPDLVNDVHVSMSKNSRQPYC-VSKEAGHQTSAESWGTGRAV 326
RP +SM K R+PY + +E GH+ S T R V
Sbjct: 156 RPGCDTHEKISMEKRKREPYLELIRETGHERQRRSVSTERNV 197
>SB_13496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 818 GGSACXIQELHTRDVAESASQTLILVEDYEGSLTLDTTTVAHFTLT 681
G S C I E + + E T I + G +DT V+H +T
Sbjct: 13 GSSGCFITEDQRQQLGEDGVMTSIQLGTINGKEIVDTVAVSHVVVT 58
>SB_25665| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 697
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/91 (23%), Positives = 43/91 (47%)
Frame = -3
Query: 797 QELHTRDVAESASQTLILVEDYEGSLTLDTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQ 618
Q+ H + + Q + ++ + S T DT+ V + S+ T ++ + P L APQ
Sbjct: 311 QQHHQQQQQQQQQQQQLFMQGIQLSST-DTSQVNMMSPLSSPTQQVNPIPLNSPILPAPQ 369
Query: 617 EDDSLFGLVDLLDFVGYNQGKLGNLFNNVSS 525
++++L + +LL N + L + + S
Sbjct: 370 QNNTLQNIQNLLTISSQNPEAMQMLLSGLGS 400
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,348,993
Number of Sequences: 59808
Number of extensions: 605079
Number of successful extensions: 1949
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1892
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2443309836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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