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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O05
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0059 - 444991-446908,447595-448218,448431-448861,450974-45...    33   0.38 
06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,402...    30   2.0  
04_01_0112 + 1151242-1151272,1151722-1151928,1151996-1152318,115...    29   3.6  
03_06_0090 + 31570588-31570710,31570962-31571080,31572215-315722...    29   4.7  
10_08_0379 - 17373533-17374147                                         29   6.2  
06_01_1160 - 9868340-9868360,9868639-9868986                           29   6.2  
02_05_1349 + 35841694-35843738,35844506-35844624,35844932-358450...    29   6.2  
06_03_1215 - 28474019-28474079,28475658-28476739                       28   8.3  
06_01_0570 + 4026889-4027537,4028340-4028689,4029258-4029433,402...    28   8.3  
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358...    28   8.3  
03_06_0187 + 32209924-32210634                                         28   8.3  

>11_01_0059 -
           444991-446908,447595-448218,448431-448861,450974-452293
          Length = 1430

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
 Frame = -2

Query: 371 SFLYIEFGWRWRRCHYGSSFFHSYPLLSQC-RP---VDFTAVHI---LIGRWIQGPLGGI 213
           S  +  FGW   R  +GS F H+   +  C  P   +  +A+HI   +IG  + G  G +
Sbjct: 204 SCTFCAFGWNMERLGFGSMFVHTATFVLLCFAPLWVMGVSALHIHDVVIGDMV-GGAGAL 262

Query: 212 SWICRILVGIHFRL 171
             +C +L G ++R+
Sbjct: 263 LCVCGLLYGGYWRI 276


>06_01_0569 +
           4019254-4021996,4022121-4022272,4022356-4022427,
           4022521-4022673,4022749-4022912,4022990-4023137,
           4023530-4023652,4023774-4023861,4023951-4024129
          Length = 1273

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 340 HLHPNSM*RKEKPPWRWKIPKTTPMYSCLQVQSGTHQRIPGAVHG 474
           H H ++M +++  P     P   P++  L  ++ T Q IPGA  G
Sbjct: 485 HAHSDNMIQEQGTPHGVNNPDAAPVFYSLHQENVTKQHIPGATAG 529


>04_01_0112 +
           1151242-1151272,1151722-1151928,1151996-1152318,
           1152552-1153793
          Length = 600

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 117 NTLNSYVTPKKLLNHSIIQPKMYSNKDAANPGYPTQWALNPTAYQNVD 260
           N LN  + P  + N SI+   + SN D   P  P  W L    + +++
Sbjct: 242 NNLNEEILPTLIGNLSILTSLLLSNNDLTGPMPPFHWNLGSLKHLSLE 289


>03_06_0090 +
           31570588-31570710,31570962-31571080,31572215-31572284,
           31572544-31573492,31574789-31575699
          Length = 723

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -1

Query: 429 LEATVHRCCFRYFPPPWGLLLPLHRVWVEVAPVPLWQQLLS*LSIAEPMPPSRLHCSP 256
           ++   H    R+ P    LL+ L  + V + P+ L   LL  L I  P P   L CSP
Sbjct: 509 VDVVQHVAGVRHVPRRAYLLVQLPHLLVRLPPLRLVAVLLLLLMILPPRPRRSLECSP 566


>10_08_0379 - 17373533-17374147
          Length = 204

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +2

Query: 278 GGIGSAMDSYERSCCHSGTGATSTQTRCRGRRSPHGGGKYRKQHRCTVA-SRCRVELINE 454
           GG G  M +   S   S  GA+ ++   + RR  +  G+Y + HR  ++ +RC    + E
Sbjct: 18  GGGGGGMATGATSA--SAAGASPSRYESQKRRDWNTFGQYLRNHRPPLSLARCSGAHVLE 75

Query: 455 FLGRFMESMG 484
           FL R+++  G
Sbjct: 76  FL-RYLDQFG 84


>06_01_1160 - 9868340-9868360,9868639-9868986
          Length = 122

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 320 CHSGTGATSTQTRCRGRRSPHGG 388
           C SG G T    RCRG R   GG
Sbjct: 31  CSSGAGLTCRDNRCRGGRGGIGG 53


>02_05_1349 +
           35841694-35843738,35844506-35844624,35844932-35845075,
           35845189-35845310,35845474-35845609,35845861-35845957,
           35846727-35846899,35847099-35847262,35847466-35847537,
           35847833-35847928,35847999-35848124
          Length = 1097

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 23/79 (29%), Positives = 34/79 (43%)
 Frame = +2

Query: 269 SRLGGIGSAMDSYERSCCHSGTGATSTQTRCRGRRSPHGGGKYRKQHRCTVASRCRVELI 448
           +R G +  A +   RS       A S       RR   GGG+  +    + A+R  +EL 
Sbjct: 579 ARAGDLDGAAEIVRRSSGGGSPAAWSALLSACRRRGDGGGGEVGR----SAAARV-LELE 633

Query: 449 NEFLGRFMESMGMGLARSW 505
                 ++ SMGMGL + W
Sbjct: 634 PGKSAGYLMSMGMGLGKGW 652


>06_03_1215 - 28474019-28474079,28475658-28476739
          Length = 380

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +1

Query: 349 PNSM*RKEKPPWRWKIPKTTPMYSCLQVQSGTHQRIPGAVHGINGDGVGQVMEIQKFLP- 525
           P ++   +  PW   +P  TP   CL ++S  +   P  VHG     +  +     F+  
Sbjct: 127 PKNLRNNDAGPWSLHLPAATP---CLSMESCWYSVRPPHVHGPGASALKSLTFKDSFMVL 183

Query: 526 NLLYL*STGFP 558
           +  YL  T FP
Sbjct: 184 HPGYLQDTAFP 194


>06_01_0570 +
           4026889-4027537,4028340-4028689,4029258-4029433,
           4029593-4029659,4029746-4029780,4030084-4030186,
           4031606-4031699,4031764-4031813,4031889-4032000,
           4032275-4032401,4032491-4032941
          Length = 737

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 501 DLANP-IPIDSMNRPRNSLMSSTLHLEATVHRCCFRYFPPPWGLLLPLHR 355
           D+A P  P D+++ PR    +S +    T     +   P P G   P+HR
Sbjct: 300 DIAGPSAPADNLDAPRKGTAASLMDWNPTARTFQWEDSPDPDGSRSPIHR 349


>06_01_0501 -
           3587390-3587528,3587922-3588031,3588122-3588187,
           3588293-3588410,3588499-3588554,3588647-3588766,
           3588937-3589035,3589443-3589490,3589534-3589545,
           3590353-3590418,3591412-3591471,3592061-3592162,
           3592405-3592426,3592959-3593041,3593166-3593293,
           3593775-3593881,3594376-3594845
          Length = 601

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/38 (26%), Positives = 24/38 (63%)
 Frame = -1

Query: 435 LHLEATVHRCCFRYFPPPWGLLLPLHRVWVEVAPVPLW 322
           L+++   H    +++P  +G+L   +RV++E+  +PL+
Sbjct: 301 LNIQIAFHGTHTKHYPGIFGVLAKYYRVYLEILTIPLF 338


>03_06_0187 + 32209924-32210634
          Length = 236

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 510 PKVPSEPTLPLIDGFPVQPDATGPSISGYTTAAG---SGPT 623
           P +P+ PT+P I G P    A GP+I    T  G    GPT
Sbjct: 67  PTIPTIPTVPTIPGVP----AVGPTIPAIPTIPGVPAVGPT 103


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,283,506
Number of Sequences: 37544
Number of extensions: 539686
Number of successful extensions: 1484
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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