BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O05 (855 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0059 - 444991-446908,447595-448218,448431-448861,450974-45... 33 0.38 06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,402... 30 2.0 04_01_0112 + 1151242-1151272,1151722-1151928,1151996-1152318,115... 29 3.6 03_06_0090 + 31570588-31570710,31570962-31571080,31572215-315722... 29 4.7 10_08_0379 - 17373533-17374147 29 6.2 06_01_1160 - 9868340-9868360,9868639-9868986 29 6.2 02_05_1349 + 35841694-35843738,35844506-35844624,35844932-358450... 29 6.2 06_03_1215 - 28474019-28474079,28475658-28476739 28 8.3 06_01_0570 + 4026889-4027537,4028340-4028689,4029258-4029433,402... 28 8.3 06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 28 8.3 03_06_0187 + 32209924-32210634 28 8.3 >11_01_0059 - 444991-446908,447595-448218,448431-448861,450974-452293 Length = 1430 Score = 32.7 bits (71), Expect = 0.38 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%) Frame = -2 Query: 371 SFLYIEFGWRWRRCHYGSSFFHSYPLLSQC-RP---VDFTAVHI---LIGRWIQGPLGGI 213 S + FGW R +GS F H+ + C P + +A+HI +IG + G G + Sbjct: 204 SCTFCAFGWNMERLGFGSMFVHTATFVLLCFAPLWVMGVSALHIHDVVIGDMV-GGAGAL 262 Query: 212 SWICRILVGIHFRL 171 +C +L G ++R+ Sbjct: 263 LCVCGLLYGGYWRI 276 >06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427, 4022521-4022673,4022749-4022912,4022990-4023137, 4023530-4023652,4023774-4023861,4023951-4024129 Length = 1273 Score = 30.3 bits (65), Expect = 2.0 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +1 Query: 340 HLHPNSM*RKEKPPWRWKIPKTTPMYSCLQVQSGTHQRIPGAVHG 474 H H ++M +++ P P P++ L ++ T Q IPGA G Sbjct: 485 HAHSDNMIQEQGTPHGVNNPDAAPVFYSLHQENVTKQHIPGATAG 529 >04_01_0112 + 1151242-1151272,1151722-1151928,1151996-1152318, 1152552-1153793 Length = 600 Score = 29.5 bits (63), Expect = 3.6 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = +3 Query: 117 NTLNSYVTPKKLLNHSIIQPKMYSNKDAANPGYPTQWALNPTAYQNVD 260 N LN + P + N SI+ + SN D P P W L + +++ Sbjct: 242 NNLNEEILPTLIGNLSILTSLLLSNNDLTGPMPPFHWNLGSLKHLSLE 289 >03_06_0090 + 31570588-31570710,31570962-31571080,31572215-31572284, 31572544-31573492,31574789-31575699 Length = 723 Score = 29.1 bits (62), Expect = 4.7 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = -1 Query: 429 LEATVHRCCFRYFPPPWGLLLPLHRVWVEVAPVPLWQQLLS*LSIAEPMPPSRLHCSP 256 ++ H R+ P LL+ L + V + P+ L LL L I P P L CSP Sbjct: 509 VDVVQHVAGVRHVPRRAYLLVQLPHLLVRLPPLRLVAVLLLLLMILPPRPRRSLECSP 566 >10_08_0379 - 17373533-17374147 Length = 204 Score = 28.7 bits (61), Expect = 6.2 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +2 Query: 278 GGIGSAMDSYERSCCHSGTGATSTQTRCRGRRSPHGGGKYRKQHRCTVA-SRCRVELINE 454 GG G M + S S GA+ ++ + RR + G+Y + HR ++ +RC + E Sbjct: 18 GGGGGGMATGATSA--SAAGASPSRYESQKRRDWNTFGQYLRNHRPPLSLARCSGAHVLE 75 Query: 455 FLGRFMESMG 484 FL R+++ G Sbjct: 76 FL-RYLDQFG 84 >06_01_1160 - 9868340-9868360,9868639-9868986 Length = 122 Score = 28.7 bits (61), Expect = 6.2 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = +2 Query: 320 CHSGTGATSTQTRCRGRRSPHGG 388 C SG G T RCRG R GG Sbjct: 31 CSSGAGLTCRDNRCRGGRGGIGG 53 >02_05_1349 + 35841694-35843738,35844506-35844624,35844932-35845075, 35845189-35845310,35845474-35845609,35845861-35845957, 35846727-35846899,35847099-35847262,35847466-35847537, 35847833-35847928,35847999-35848124 Length = 1097 Score = 28.7 bits (61), Expect = 6.2 Identities = 23/79 (29%), Positives = 34/79 (43%) Frame = +2 Query: 269 SRLGGIGSAMDSYERSCCHSGTGATSTQTRCRGRRSPHGGGKYRKQHRCTVASRCRVELI 448 +R G + A + RS A S RR GGG+ + + A+R +EL Sbjct: 579 ARAGDLDGAAEIVRRSSGGGSPAAWSALLSACRRRGDGGGGEVGR----SAAARV-LELE 633 Query: 449 NEFLGRFMESMGMGLARSW 505 ++ SMGMGL + W Sbjct: 634 PGKSAGYLMSMGMGLGKGW 652 >06_03_1215 - 28474019-28474079,28475658-28476739 Length = 380 Score = 28.3 bits (60), Expect = 8.3 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = +1 Query: 349 PNSM*RKEKPPWRWKIPKTTPMYSCLQVQSGTHQRIPGAVHGINGDGVGQVMEIQKFLP- 525 P ++ + PW +P TP CL ++S + P VHG + + F+ Sbjct: 127 PKNLRNNDAGPWSLHLPAATP---CLSMESCWYSVRPPHVHGPGASALKSLTFKDSFMVL 183 Query: 526 NLLYL*STGFP 558 + YL T FP Sbjct: 184 HPGYLQDTAFP 194 >06_01_0570 + 4026889-4027537,4028340-4028689,4029258-4029433, 4029593-4029659,4029746-4029780,4030084-4030186, 4031606-4031699,4031764-4031813,4031889-4032000, 4032275-4032401,4032491-4032941 Length = 737 Score = 28.3 bits (60), Expect = 8.3 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -1 Query: 501 DLANP-IPIDSMNRPRNSLMSSTLHLEATVHRCCFRYFPPPWGLLLPLHR 355 D+A P P D+++ PR +S + T + P P G P+HR Sbjct: 300 DIAGPSAPADNLDAPRKGTAASLMDWNPTARTFQWEDSPDPDGSRSPIHR 349 >06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187, 3588293-3588410,3588499-3588554,3588647-3588766, 3588937-3589035,3589443-3589490,3589534-3589545, 3590353-3590418,3591412-3591471,3592061-3592162, 3592405-3592426,3592959-3593041,3593166-3593293, 3593775-3593881,3594376-3594845 Length = 601 Score = 28.3 bits (60), Expect = 8.3 Identities = 10/38 (26%), Positives = 24/38 (63%) Frame = -1 Query: 435 LHLEATVHRCCFRYFPPPWGLLLPLHRVWVEVAPVPLW 322 L+++ H +++P +G+L +RV++E+ +PL+ Sbjct: 301 LNIQIAFHGTHTKHYPGIFGVLAKYYRVYLEILTIPLF 338 >03_06_0187 + 32209924-32210634 Length = 236 Score = 28.3 bits (60), Expect = 8.3 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = +3 Query: 510 PKVPSEPTLPLIDGFPVQPDATGPSISGYTTAAG---SGPT 623 P +P+ PT+P I G P A GP+I T G GPT Sbjct: 67 PTIPTIPTVPTIPGVP----AVGPTIPAIPTIPGVPAVGPT 103 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,283,506 Number of Sequences: 37544 Number of extensions: 539686 Number of successful extensions: 1484 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1424 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1482 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2385713652 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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